RNA–Protein interactions for RNA: ENST00000309546.7

LIME1-201, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIME1, Length 1,178 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-201ENST00000309546 CBLN1P23435 193 aa14.72□□□□□ -0.05
LIME1-201ENST00000309546 G6PCP35575 357 aa14.72□□□□□ -0.05
LIME1-201ENST00000309546 TSPAN5P62079 268 aa14.72□□□□□ -0.05
LIME1-201ENST00000309546 PHLDA2Q53GA4 152 aa14.72□□□□□ -0.05
LIME1-201ENST00000309546 DEFB125Q8N687 156 aa14.72□□□□□ -0.05
LIME1-201ENST00000309546 FCAMRQ8WWV6 532 aa14.72□□□□□ -0.05
LIME1-201ENST00000309546 DGCR14Q96DF8 476 aaKnown RBP14.72□□□□□ -0.05
LIME1-201ENST00000309546 RETNQ9HD89 108 aa14.72□□□□□ -0.05
LIME1-201ENST00000309546 NSG2Q9Y328 171 aa14.72□□□□□ -0.05
LIME1-201ENST00000309546 IGHV3-35A0A0C4DH35 117 aa14.71□□□□□ -0.05
LIME1-201ENST00000309546 TEX50A0A1B0GTY4 177 aa14.71□□□□□ -0.05
LIME1-201ENST00000309546 A8MWP6 167 aa14.71□□□□□ -0.05
LIME1-201ENST00000309546 IFNA6P05013 189 aa14.71□□□□□ -0.05
LIME1-201ENST00000309546 OR13C7P0DN81 318 aa14.71□□□□□ -0.05
LIME1-201ENST00000309546 THOC7Q6I9Y2 204 aaKnown RBP14.71□□□□□ -0.05
LIME1-201ENST00000309546 LYSMD2Q8IV50 215 aa14.71□□□□□ -0.05
LIME1-201ENST00000309546 TMEM61Q8N0U2 210 aa14.71□□□□□ -0.05
LIME1-201ENST00000309546 GDPD1Q8N9F7 314 aa14.71□□□□□ -0.05
LIME1-201ENST00000309546 OR1L8Q8NGR8 309 aa14.71□□□□□ -0.05
LIME1-201ENST00000309546 ZNF502Q8TBZ5 544 aa14.71□□□□□ -0.05
LIME1-201ENST00000309546 GPX8Q8TED1 209 aa14.71□□□□□ -0.05
LIME1-201ENST00000309546 SRD5A3Q9H8P0 318 aa14.71□□□□□ -0.05
LIME1-201ENST00000309546 EDA2RQ9HAV5 297 aa14.71□□□□□ -0.05
LIME1-201ENST00000309546 CYB5BO43169 146 aa14.7□□□□□ -0.06
LIME1-201ENST00000309546 HPGDSO60760 199 aa14.7□□□□□ -0.06
LIME1-201ENST00000309546 SNAPC5O75971 98 aa14.7□□□□□ -0.06
LIME1-201ENST00000309546 APOA1P02647 267 aa14.7□□□□□ -0.06
LIME1-201ENST00000309546 FGF2P09038 288 aa14.7□□□□□ -0.06
LIME1-201ENST00000309546 WT1-ASQ06250 92 aa14.7□□□□□ -0.06
LIME1-201ENST00000309546 ZNF57Q68EA5 555 aaPredicted RBP14.7□□□□□ -0.06
LIME1-201ENST00000309546 SLC25A24Q6NUK1 477 aa14.7□□□□□ -0.06
LIME1-201ENST00000309546 PLET1Q6UQ28 207 aa14.7□□□□□ -0.06
LIME1-201ENST00000309546 BTNL8Q6UX41 500 aa14.7□□□□□ -0.06
LIME1-201ENST00000309546 UNQ9165/PRO28630Q6UXU0 137 aa14.7□□□□□ -0.06
LIME1-201ENST00000309546 UXS1Q8NBZ7 420 aa14.7□□□□□ -0.06
LIME1-201ENST00000309546 MLXQ9UH92 298 aa14.7□□□□□ -0.06
LIME1-201ENST00000309546 OR51B2Q9Y5P1 312 aa14.7□□□□□ -0.06
LIME1-201ENST00000309546 IGHV3-21A0A0B4J1V1 117 aa14.69□□□□□ -0.06
LIME1-201ENST00000309546 OR11H12B2RN74 326 aa14.69□□□□□ -0.06
LIME1-201ENST00000309546 SCAF4O95104 1147 aaKnown RBP14.69□□□□□ -0.06
LIME1-201ENST00000309546 S100GP29377 79 aa14.69□□□□□ -0.06
LIME1-201ENST00000309546 RCVRNP35243 200 aa14.69□□□□□ -0.06
LIME1-201ENST00000309546 ZNF585BQ52M93 769 aa14.69□□□□□ -0.06
LIME1-201ENST00000309546 TM4SF20Q53R12 229 aa14.69□□□□□ -0.06
LIME1-201ENST00000309546 RNASE12Q5GAN4 147 aaKnown RBP14.69□□□□□ -0.06
LIME1-201ENST00000309546 HSD17B13Q7Z5P4 300 aaPredicted RBP14.69□□□□□ -0.06
LIME1-201ENST00000309546 LSM10Q969L4 123 aaKnown RBP14.69□□□□□ -0.06
LIME1-201ENST00000309546 CMTM3Q96MX0 182 aa14.69□□□□□ -0.06
LIME1-201ENST00000309546 FAM110AQ9BQ89 295 aa14.69□□□□□ -0.06
LIME1-201ENST00000309546 SCPEP1Q9HB40 452 aa14.69□□□□□ -0.06
LIME1-201ENST00000309546 FAM25AB3EWG3 89 aa14.68□□□□□ -0.06
LIME1-201ENST00000309546 FAM25CB3EWG5 89 aa14.68□□□□□ -0.06
LIME1-201ENST00000309546 FAM25GB3EWG6 89 aa14.68□□□□□ -0.06
LIME1-201ENST00000309546 SERPINE2P07093 398 aa14.68□□□□□ -0.06
LIME1-201ENST00000309546 ELK1P19419 428 aa14.68□□□□□ -0.06
LIME1-201ENST00000309546 PTBP1P26599 531 aaKnown RBP eCLIP14.68□□□□□ -0.06
LIME1-201ENST00000309546 SLC16A13Q7RTY0 426 aa14.68□□□□□ -0.06
LIME1-201ENST00000309546 NDUFA4L2Q9NRX3 87 aa14.68□□□□□ -0.06
LIME1-201ENST00000309546 STARD9Q9P2P6 4700 aa14.68□□□□□ -0.06
LIME1-201ENST00000309546 DYNC2H1Q8NCM8 4307 aaKnown RBP14.67□□□□□ -0.06
LIME1-201ENST00000309546 RBMY1BA6NDE4 496 aaKnown RBP14.67□□□□□ -0.06
LIME1-201ENST00000309546 RBMY1EA6NEQ0 496 aaKnown RBP14.67□□□□□ -0.06
LIME1-201ENST00000309546 OR2T8A6NH00 312 aa14.67□□□□□ -0.06
LIME1-201ENST00000309546 TGOLN2O43493 480 aa14.67□□□□□ -0.06
LIME1-201ENST00000309546 RBMY1DP0C7P1 496 aaKnown RBP14.67□□□□□ -0.06
LIME1-201ENST00000309546 RORCP51449 518 aa14.67□□□□□ -0.06
LIME1-201ENST00000309546 LPCAT3Q6P1A2 487 aa14.67□□□□□ -0.06
LIME1-201ENST00000309546 LINC00322Q6ZN03 302 aaPredicted RBP14.67□□□□□ -0.06
LIME1-201ENST00000309546 TBC1D26Q86UD7 250 aa14.67□□□□□ -0.06
LIME1-201ENST00000309546 OR52B4Q8NGK2 314 aa14.67□□□□□ -0.06
LIME1-201ENST00000309546 VN1R17PQ8TDU5 208 aa14.67□□□□□ -0.06
LIME1-201ENST00000309546 HIPK2Q9H2X6 1198 aa14.67□□□□□ -0.06
LIME1-201ENST00000309546 PRNDQ9UKY0 176 aa14.67□□□□□ -0.06
LIME1-201ENST00000309546 F11RQ9Y624 299 aaKnown RBP14.67□□□□□ -0.06
LIME1-201ENST00000309546 RYR2Q92736 4967 aa14.66□□□□□ -0.06
LIME1-201ENST00000309546 MFAP2P55001 183 aa14.66□□□□□ -0.06
LIME1-201ENST00000309546 NAA50Q9GZZ1 169 aaKnown RBP14.66□□□□□ -0.06
LIME1-201ENST00000309546 GAR1Q9NY12 217 aaKnown RBP14.66□□□□□ -0.06
LIME1-201ENST00000309546 UFC1Q9Y3C8 167 aa14.66□□□□□ -0.06
LIME1-201ENST00000309546 DBX1A6NMT0 343 aa14.65□□□□□ -0.06
LIME1-201ENST00000309546 C15orf61A6NNL5 157 aa14.65□□□□□ -0.06
LIME1-201ENST00000309546 M0QYG6 137 aa14.65□□□□□ -0.06
LIME1-201ENST00000309546 MZT2AQ6P582 158 aa14.65□□□□□ -0.06
LIME1-201ENST00000309546 RBPMS2Q6ZRY4 209 aaKnown RBP14.65□□□□□ -0.06
LIME1-201ENST00000309546 SLC38A6Q8IZM9 456 aa14.65□□□□□ -0.06
LIME1-201ENST00000309546 UBAC2Q8NBM4 344 aa14.65□□□□□ -0.06
LIME1-201ENST00000309546 OR5B3Q8NH48 314 aa14.65□□□□□ -0.06
LIME1-201ENST00000309546 MARC2Q969Z3 335 aa14.65□□□□□ -0.06
LIME1-201ENST00000309546 TMEM56Q96MV1 263 aa14.65□□□□□ -0.06
LIME1-201ENST00000309546 TSC22D3Q99576 134 aa14.65□□□□□ -0.06
LIME1-201ENST00000309546 H2BFWTQ7Z2G1 175 aa14.64□□□□□ -0.07
LIME1-201ENST00000309546 TMEM190Q8WZ59 177 aa14.64□□□□□ -0.07
LIME1-201ENST00000309546 AP3S1Q92572 193 aa14.64□□□□□ -0.07
LIME1-201ENST00000309546 BSCL2Q96G97 398 aaPredicted RBP14.64□□□□□ -0.07
LIME1-201ENST00000309546 ZNF436Q9C0F3 470 aaPredicted RBP14.64□□□□□ -0.07
LIME1-201ENST00000309546 FKBP11Q9NYL4 201 aa14.64□□□□□ -0.07
LIME1-201ENST00000309546 C21orf62Q9NYP8 219 aa14.64□□□□□ -0.07
LIME1-201ENST00000309546 MRPL27Q9P0M9 148 aaKnown RBP14.64□□□□□ -0.07
LIME1-201ENST00000309546 SMIM18P0DKX4 95 aa14.63□□□□□ -0.07
LIME1-201ENST00000309546 ELLP55199 621 aaPredicted RBP14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms