RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 PRTN3P24158 256 aa17.15■□□□□ 0.34
ATG4D-201ENST00000309469 LCN15Q6UWW0 184 aa17.15■□□□□ 0.34
ATG4D-201ENST00000309469 TREML4Q6UXN2 200 aa17.15■□□□□ 0.34
ATG4D-201ENST00000309469 SSX7Q7RTT5 188 aa17.15■□□□□ 0.34
ATG4D-201ENST00000309469 RPP25LQ8N5L8 163 aaKnown RBP17.15■□□□□ 0.34
ATG4D-201ENST00000309469 CLRN3Q8NCR9 226 aa17.15■□□□□ 0.34
ATG4D-201ENST00000309469 ZNF430Q9H8G1 570 aaPredicted RBP17.15■□□□□ 0.34
ATG4D-201ENST00000309469 IGHV2-5P01817 119 aa17.15■□□□□ 0.34
ATG4D-201ENST00000309469 TMEM88Q6PEY1 159 aa17.15■□□□□ 0.34
ATG4D-201ENST00000309469 OR10W1Q8NGF6 305 aa17.15■□□□□ 0.34
ATG4D-201ENST00000309469 RNF224P0DH78 156 aa17.14■□□□□ 0.33
ATG4D-201ENST00000309469 ZFP36P26651 326 aaKnown RBP17.14■□□□□ 0.33
ATG4D-201ENST00000309469 HAGHQ16775 308 aa17.14■□□□□ 0.33
ATG4D-201ENST00000309469 BSXQ3C1V8 233 aa17.14■□□□□ 0.33
ATG4D-201ENST00000309469 ZNF787Q6DD87 383 aa17.14■□□□□ 0.33
ATG4D-201ENST00000309469 C1orf122Q6ZSJ8 110 aa17.14■□□□□ 0.33
ATG4D-201ENST00000309469 CLDND2Q8NHS1 167 aa17.14■□□□□ 0.33
ATG4D-201ENST00000309469 NPVFQ9HCQ7 196 aa17.14■□□□□ 0.33
ATG4D-201ENST00000309469 INS-IGF2F8WCM5 200 aa17.13■□□□□ 0.33
ATG4D-201ENST00000309469 C2orf83Q53S99 150 aa17.13■□□□□ 0.33
ATG4D-201ENST00000309469 ARSJQ5FYB0 599 aaPredicted RBP17.13■□□□□ 0.33
ATG4D-201ENST00000309469 TEX45Q8NA69 505 aa17.13■□□□□ 0.33
ATG4D-201ENST00000309469 OR10G4Q8NGN3 311 aa17.13■□□□□ 0.33
ATG4D-201ENST00000309469 OR10G9Q8NGN4 311 aa17.13■□□□□ 0.33
ATG4D-201ENST00000309469 OR10G7Q8NGN6 311 aa17.13■□□□□ 0.33
ATG4D-201ENST00000309469 SLC39A9Q9NUM3 307 aa17.13■□□□□ 0.33
ATG4D-201ENST00000309469 E7EUB6 86 aa17.13■□□□□ 0.33
ATG4D-201ENST00000309469 HTR1DP28221 377 aa17.13■□□□□ 0.33
ATG4D-201ENST00000309469 LDLRAD2Q5SZI1 272 aa17.13■□□□□ 0.33
ATG4D-201ENST00000309469 TPTE2P1Q5T6R2 138 aa17.13■□□□□ 0.33
ATG4D-201ENST00000309469 CBLN2Q8IUK8 224 aa17.13■□□□□ 0.33
ATG4D-201ENST00000309469 KIR3DL3Q8N743 410 aa17.13■□□□□ 0.33
ATG4D-201ENST00000309469 IGFBPL1Q8WX77 278 aa17.13■□□□□ 0.33
ATG4D-201ENST00000309469 TPSG1Q9NRR2 321 aa17.13■□□□□ 0.33
ATG4D-201ENST00000309469 USP24Q9UPU5 2620 aa17.13■□□□□ 0.33
ATG4D-201ENST00000309469 A0A1W2PN81 502 aa17.12■□□□□ 0.33
ATG4D-201ENST00000309469 MAP1LC3B2A6NCE7 125 aa17.12■□□□□ 0.33
ATG4D-201ENST00000309469 OR13C7P0DN81 318 aa17.12■□□□□ 0.33
ATG4D-201ENST00000309469 RNASE2P10153 161 aaKnown RBP17.12■□□□□ 0.33
ATG4D-201ENST00000309469 CHRNA7P36544 502 aa17.12■□□□□ 0.33
ATG4D-201ENST00000309469 FGF8P55075 233 aaPredicted RBP17.12■□□□□ 0.33
ATG4D-201ENST00000309469 ERHP84090 104 aaKnown RBP17.12■□□□□ 0.33
ATG4D-201ENST00000309469 MRGPRG-AS1Q2M3A8 158 aa17.12■□□□□ 0.33
ATG4D-201ENST00000309469 ZNF506Q5JVG8 444 aa17.12■□□□□ 0.33
ATG4D-201ENST00000309469 HCP5Q6MZN7 132 aa17.12■□□□□ 0.33
ATG4D-201ENST00000309469 MAP1LC3BQ9GZQ8 125 aa17.12■□□□□ 0.33
ATG4D-201ENST00000309469 DPM3Q9P2X0 92 aa17.12■□□□□ 0.33
ATG4D-201ENST00000309469 A0A1W2PPI3 338 aa17.11■□□□□ 0.33
ATG4D-201ENST00000309469 CGB1A6NKQ9 187 aa17.11■□□□□ 0.33
ATG4D-201ENST00000309469 ATF4P18848 351 aaPredicted RBP17.11■□□□□ 0.33
ATG4D-201ENST00000309469 KLRD1Q13241 179 aa17.11■□□□□ 0.33
ATG4D-201ENST00000309469 MGST2Q99735 147 aa17.11■□□□□ 0.33
ATG4D-201ENST00000309469 BPESC1Q9GZL8 116 aa17.11■□□□□ 0.33
ATG4D-201ENST00000309469 LSM4Q9Y4Z0 139 aaKnown RBP17.11■□□□□ 0.33
ATG4D-201ENST00000309469 KLF2Q9Y5W3 355 aaPredicted RBP17.11■□□□□ 0.33
ATG4D-201ENST00000309469 ODF3BA8MYP8 253 aa17.11■□□□□ 0.33
ATG4D-201ENST00000309469 FNDC10F2Z333 226 aa17.11■□□□□ 0.33
ATG4D-201ENST00000309469 SOX15O60248 233 aa17.11■□□□□ 0.33
ATG4D-201ENST00000309469 CRYGBP07316 175 aa17.11■□□□□ 0.33
ATG4D-201ENST00000309469 OPRK1P41145 380 aa17.11■□□□□ 0.33
ATG4D-201ENST00000309469 ICAM4Q14773 271 aa17.11■□□□□ 0.33
ATG4D-201ENST00000309469 PSG5Q15238 335 aa17.11■□□□□ 0.33
ATG4D-201ENST00000309469 ACOT6Q3I5F7 207 aaPredicted RBP17.11■□□□□ 0.33
ATG4D-201ENST00000309469 C10orf55Q5SWW7 151 aa17.11■□□□□ 0.33
ATG4D-201ENST00000309469 C1orf159Q96HA4 380 aa17.11■□□□□ 0.33
ATG4D-201ENST00000309469 ACTR3CQ9C0K3 210 aaPredicted RBP17.11■□□□□ 0.33
ATG4D-201ENST00000309469 GNG13Q9P2W3 67 aa17.11■□□□□ 0.33
ATG4D-201ENST00000309469 CTXND1A0A1B0GTU2 59 aa17.1■□□□□ 0.33
ATG4D-201ENST00000309469 IGHV4-39P01824 125 aa17.1■□□□□ 0.33
ATG4D-201ENST00000309469 CNTFRP26992 372 aa17.1■□□□□ 0.33
ATG4D-201ENST00000309469 ZNF843Q8N446 348 aa17.1■□□□□ 0.33
ATG4D-201ENST00000309469 SPOCK3Q9BQ16 436 aa17.1■□□□□ 0.33
ATG4D-201ENST00000309469 CYB5BO43169 146 aa17.09■□□□□ 0.33
ATG4D-201ENST00000309469 EIF3GO75821 320 aaKnown RBP eCLIP17.09■□□□□ 0.33
ATG4D-201ENST00000309469 HSPB1P04792 205 aaKnown RBP17.09■□□□□ 0.33
ATG4D-201ENST00000309469 CTRB1P17538 263 aa17.09■□□□□ 0.33
ATG4D-201ENST00000309469 CEACAM3P40198 252 aa17.09■□□□□ 0.33
ATG4D-201ENST00000309469 LMO4P61968 165 aa17.09■□□□□ 0.33
ATG4D-201ENST00000309469 LCN2P80188 198 aa17.09■□□□□ 0.33
ATG4D-201ENST00000309469 PRSS8Q16651 343 aa17.09■□□□□ 0.33
ATG4D-201ENST00000309469 KHDC3LQ587J8 217 aa17.09■□□□□ 0.33
ATG4D-201ENST00000309469 SOHLH1Q5JUK2 328 aa17.09■□□□□ 0.33
ATG4D-201ENST00000309469 CTRB2Q6GPI1 263 aa17.09■□□□□ 0.33
ATG4D-201ENST00000309469 FAM122CQ6P4D5 195 aa17.09■□□□□ 0.33
ATG4D-201ENST00000309469 TEPPQ6URK8 271 aa17.09■□□□□ 0.33
ATG4D-201ENST00000309469 VMO1Q7Z5L0 202 aa17.09■□□□□ 0.33
ATG4D-201ENST00000309469 GGTLC1Q9BX51 225 aa17.09■□□□□ 0.33
ATG4D-201ENST00000309469 SLC25A22Q9H936 323 aa17.09■□□□□ 0.33
ATG4D-201ENST00000309469 UNKLQ9H9P5 680 aaKnown RBP17.09■□□□□ 0.33
ATG4D-201ENST00000309469 CACNA1BQ00975 2339 aa17.09■□□□□ 0.33
ATG4D-201ENST00000309469 LOC102723971A0A1B0GUV8 181 aa17.09■□□□□ 0.33
ATG4D-201ENST00000309469 SRP19P09132 144 aaKnown RBP17.09■□□□□ 0.33
ATG4D-201ENST00000309469 PAX2Q02962 417 aa17.09■□□□□ 0.33
ATG4D-201ENST00000309469 WT1-ASQ06250 92 aa17.09■□□□□ 0.33
ATG4D-201ENST00000309469 MMD2Q8IY49 270 aa17.09■□□□□ 0.33
ATG4D-201ENST00000309469 RXFP4Q8TDU9 374 aa17.09■□□□□ 0.33
ATG4D-201ENST00000309469 RNF5Q99942 180 aa17.09■□□□□ 0.33
ATG4D-201ENST00000309469 SIGLEC9Q9Y336 463 aa17.09■□□□□ 0.33
ATG4D-201ENST00000309469 TIMM23O14925 209 aa17.08■□□□□ 0.33
ATG4D-201ENST00000309469 PDLIM4P50479 330 aa17.08■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms