RNA–Protein interactions for RNA: ENST00000307289.10

SYVN1-202, Transcript of synoviolin 1, humanhuman

TSL 1 (best) BASIC

Gene SYVN1, Length 2,841 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-202ENST00000307289 STPG3Q8N7X2 389 aa13.39□□□□□ -0.27
SYVN1-202ENST00000307289 DIRC2Q96SL1 478 aa13.39□□□□□ -0.27
SYVN1-202ENST00000307289 PCGF1Q9BSM1 259 aa13.39□□□□□ -0.27
SYVN1-202ENST00000307289 SCNM1Q9BWG6 230 aa13.39□□□□□ -0.27
SYVN1-202ENST00000307289 ZNF729A6NN14 1252 aaPredicted RBP13.39□□□□□ -0.27
SYVN1-202ENST00000307289 FAM90A9PA6NNJ1 464 aa13.39□□□□□ -0.27
SYVN1-202ENST00000307289 LINC00587B1AMM8 73 aa13.39□□□□□ -0.27
SYVN1-202ENST00000307289 LYNX1G3V0Z9 82 aa13.39□□□□□ -0.27
SYVN1-202ENST00000307289 TMEM250H0YL14 139 aa13.39□□□□□ -0.27
SYVN1-202ENST00000307289 J3QR06 171 aa13.39□□□□□ -0.27
SYVN1-202ENST00000307289 PFN1P07737 140 aaKnown RBP13.39□□□□□ -0.27
SYVN1-202ENST00000307289 LYNX1P0DP58 116 aa13.39□□□□□ -0.27
SYVN1-202ENST00000307289 FAM3BP58499 235 aaPredicted RBP13.39□□□□□ -0.27
SYVN1-202ENST00000307289 B2MP61769 119 aa13.39□□□□□ -0.27
SYVN1-202ENST00000307289 MANBALQ9NQG1 85 aa13.39□□□□□ -0.27
SYVN1-202ENST00000307289 CTSZQ9UBR2 303 aa13.39□□□□□ -0.27
SYVN1-202ENST00000307289 FOXA2Q9Y261 457 aaPredicted RBP13.39□□□□□ -0.27
SYVN1-202ENST00000307289 YTHDF2Q9Y5A9 579 aaKnown RBP13.39□□□□□ -0.27
SYVN1-202ENST00000307289 A0A1W2PPQ1 181 aa13.38□□□□□ -0.27
SYVN1-202ENST00000307289 S100A9P06702 114 aaKnown RBP13.38□□□□□ -0.27
SYVN1-202ENST00000307289 C1QTNF9P0C862 333 aa13.38□□□□□ -0.27
SYVN1-202ENST00000307289 SAA1P0DJI8 122 aaPredicted RBP13.38□□□□□ -0.27
SYVN1-202ENST00000307289 OPRK1P41145 380 aa13.38□□□□□ -0.27
SYVN1-202ENST00000307289 TBR1Q16650 682 aa13.38□□□□□ -0.27
SYVN1-202ENST00000307289 GSN-AS1Q9NRJ2 163 aa13.38□□□□□ -0.27
SYVN1-202ENST00000307289 TMEM242Q9NWH2 141 aa13.38□□□□□ -0.27
SYVN1-202ENST00000307289 PLAUP00749 431 aa13.38□□□□□ -0.27
SYVN1-202ENST00000307289 S100A8P05109 93 aa13.38□□□□□ -0.27
SYVN1-202ENST00000307289 CHRNB4P30926 498 aa13.38□□□□□ -0.27
SYVN1-202ENST00000307289 C10orf55Q5SWW7 151 aa13.38□□□□□ -0.27
SYVN1-202ENST00000307289 RITA1Q96K30 269 aa13.38□□□□□ -0.27
SYVN1-202ENST00000307289 LRFN3Q9BTN0 628 aa13.38□□□□□ -0.27
SYVN1-202ENST00000307289 COL6A6A6NMZ7 2263 aa13.38□□□□□ -0.27
SYVN1-202ENST00000307289 ANKHD1Q8IWZ3 2542 aaKnown RBP13.37□□□□□ -0.27
SYVN1-202ENST00000307289 TEX50A0A1B0GTY4 177 aa13.37□□□□□ -0.27
SYVN1-202ENST00000307289 SCO2A0A1W2PP80 73 aa13.37□□□□□ -0.27
SYVN1-202ENST00000307289 SMIM6P0DI80 62 aa13.37□□□□□ -0.27
SYVN1-202ENST00000307289 KIR2DS2P43631 304 aa13.37□□□□□ -0.27
SYVN1-202ENST00000307289 GALR1P47211 349 aa13.37□□□□□ -0.27
SYVN1-202ENST00000307289 EFNB3Q15768 340 aa13.37□□□□□ -0.27
SYVN1-202ENST00000307289 MALRD1Q5VYJ5 2156 aa13.37□□□□□ -0.27
SYVN1-202ENST00000307289 hADV38S2A0JD32 116 aa13.37□□□□□ -0.27
SYVN1-202ENST00000307289 CDX1P47902 265 aaPredicted RBP13.37□□□□□ -0.27
SYVN1-202ENST00000307289 TMPRSS3P57727 454 aa13.37□□□□□ -0.27
SYVN1-202ENST00000307289 RPP30P78346 268 aaKnown RBP13.37□□□□□ -0.27
SYVN1-202ENST00000307289 PYY3Q5JQD4 70 aa13.37□□□□□ -0.27
SYVN1-202ENST00000307289 FAM216AQ8WUB2 273 aa13.37□□□□□ -0.27
SYVN1-202ENST00000307289 GGACTQ9BVM4 153 aa13.37□□□□□ -0.27
SYVN1-202ENST00000307289 NPVFQ9HCQ7 196 aa13.37□□□□□ -0.27
SYVN1-202ENST00000307289 MIOXQ9UGB7 285 aa13.37□□□□□ -0.27
SYVN1-202ENST00000307289 NCOR2Q9Y618 2525 aa13.36□□□□□ -0.27
SYVN1-202ENST00000307289 TRGV8A0A0C4DH27 118 aa13.36□□□□□ -0.27
SYVN1-202ENST00000307289 E7EQL1 145 aa13.36□□□□□ -0.27
SYVN1-202ENST00000307289 TMEM178BH3BS89 294 aa13.36□□□□□ -0.27
SYVN1-202ENST00000307289 H7BYZ3 331 aa13.36□□□□□ -0.27
SYVN1-202ENST00000307289 GRNP28799 593 aaKnown RBP13.36□□□□□ -0.27
SYVN1-202ENST00000307289 OR4X1Q8NH49 305 aa13.36□□□□□ -0.27
SYVN1-202ENST00000307289 UPK2O00526 184 aa13.36□□□□□ -0.27
SYVN1-202ENST00000307289 ITGB1BP1O14713 200 aa13.36□□□□□ -0.27
SYVN1-202ENST00000307289 TNFRSF1AP19438 455 aa13.36□□□□□ -0.27
SYVN1-202ENST00000307289 DMRTC2Q8IXT2 367 aaPredicted RBP13.36□□□□□ -0.27
SYVN1-202ENST00000307289 OR10D4PQ8NGN7 298 aa13.36□□□□□ -0.27
SYVN1-202ENST00000307289 CORO2AQ92828 525 aa13.36□□□□□ -0.27
SYVN1-202ENST00000307289 LINC00574Q9H8X3 128 aa13.36□□□□□ -0.27
SYVN1-202ENST00000307289 ENY2Q9NPA8 101 aa13.36□□□□□ -0.27
SYVN1-202ENST00000307289 LINC00312Q9Y6C7 94 aa13.36□□□□□ -0.27
SYVN1-202ENST00000307289 TRBV24-1A0A075B6N3 115 aa13.35□□□□□ -0.27
SYVN1-202ENST00000307289 PPIAL4EA0A075B759 164 aa13.35□□□□□ -0.27
SYVN1-202ENST00000307289 IGHV3-72A0A0B4J1Y9 119 aa13.35□□□□□ -0.27
SYVN1-202ENST00000307289 PPIAL4DF5H284 164 aa13.35□□□□□ -0.27
SYVN1-202ENST00000307289 STAG3L2P0CL84 134 aa13.35□□□□□ -0.27
SYVN1-202ENST00000307289 STAG3L3P0CL85 134 aa13.35□□□□□ -0.27
SYVN1-202ENST00000307289 PPIAL4FP0DN26 164 aa13.35□□□□□ -0.27
SYVN1-202ENST00000307289 TEPPQ6URK8 271 aa13.35□□□□□ -0.27
SYVN1-202ENST00000307289 MIR17HGQ75NE6 70 aa13.35□□□□□ -0.27
SYVN1-202ENST00000307289 LINC01551Q86U37 167 aa13.35□□□□□ -0.27
SYVN1-202ENST00000307289 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.35□□□□□ -0.27
SYVN1-202ENST00000307289 PPIAL4AQ9Y536 164 aa13.35□□□□□ -0.27
SYVN1-202ENST00000307289 TRBV23-1A0A0A0MS06 115 aa13.35□□□□□ -0.27
SYVN1-202ENST00000307289 SHISA9B4DS77 424 aa13.35□□□□□ -0.27
SYVN1-202ENST00000307289 NUBP1P53384 320 aa13.35□□□□□ -0.27
SYVN1-202ENST00000307289 SSBP2P81877 361 aaPredicted RBP13.35□□□□□ -0.27
SYVN1-202ENST00000307289 OR9G1Q8NH87 305 aa13.35□□□□□ -0.27
SYVN1-202ENST00000307289 ZNF714Q96N38 554 aa13.35□□□□□ -0.27
SYVN1-202ENST00000307289 NCOR1P1Q9H4R4 102 aa13.35□□□□□ -0.27
SYVN1-202ENST00000307289 TMEM106BQ9NUM4 274 aa13.35□□□□□ -0.27
SYVN1-202ENST00000307289 JKAMPQ9P055 326 aa13.35□□□□□ -0.27
SYVN1-202ENST00000307289 DVL1O14640 695 aa13.35□□□□□ -0.27
SYVN1-202ENST00000307289 HRASP01112 189 aa13.35□□□□□ -0.27
SYVN1-202ENST00000307289 FABP1P07148 127 aa13.35□□□□□ -0.27
SYVN1-202ENST00000307289 SNRPCP09234 159 aaKnown RBP13.35□□□□□ -0.27
SYVN1-202ENST00000307289 OR4P4Q8NGL7 312 aa13.35□□□□□ -0.27
SYVN1-202ENST00000307289 LINC01560Q8TB33 94 aa13.35□□□□□ -0.27
SYVN1-202ENST00000307289 PLEKHA3Q9HB20 300 aa13.35□□□□□ -0.27
SYVN1-202ENST00000307289 LGALS4P56470 323 aa13.34□□□□□ -0.27
SYVN1-202ENST00000307289 HIST3H2BBQ8N257 126 aa13.34□□□□□ -0.27
SYVN1-202ENST00000307289 OR10A7Q8NGE5 316 aa13.34□□□□□ -0.27
SYVN1-202ENST00000307289 RNASE6Q93091 150 aaKnown RBP13.34□□□□□ -0.27
SYVN1-202ENST00000307289 HARBI1Q96MB7 349 aa13.34□□□□□ -0.27
SYVN1-202ENST00000307289 CTDSP1Q9GZU7 261 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms