RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 SAPCD1Q5SSQ6 148 aa13.4□□□□□ -0.26
USP42-201ENST00000306177 MED12Q93074 2177 aa13.4□□□□□ -0.26
USP42-201ENST00000306177 A0A0B4J293 547 aa13.4□□□□□ -0.26
USP42-201ENST00000306177 IGHV3-35A0A0C4DH35 117 aa13.4□□□□□ -0.26
USP42-201ENST00000306177 RPL24P83731 157 aaKnown RBP13.4□□□□□ -0.26
USP42-201ENST00000306177 COL25A1Q9BXS0 654 aaPredicted RBP13.4□□□□□ -0.26
USP42-201ENST00000306177 KIF26BQ2KJY2 2108 aa13.4□□□□□ -0.26
USP42-201ENST00000306177 SIAH2O43255 324 aa13.4□□□□□ -0.27
USP42-201ENST00000306177 IGFBP2P18065 325 aa13.4□□□□□ -0.27
USP42-201ENST00000306177 BTCP35070 178 aa13.4□□□□□ -0.27
USP42-201ENST00000306177 TFF3Q07654 80 aa13.4□□□□□ -0.27
USP42-201ENST00000306177 CENPVQ7Z7K6 275 aaPredicted RBP13.4□□□□□ -0.27
USP42-201ENST00000306177 GTF3AQ92664 365 aaKnown RBP13.4□□□□□ -0.27
USP42-201ENST00000306177 ELOVL1Q9BW60 279 aa13.4□□□□□ -0.27
USP42-201ENST00000306177 RNF222A6NCQ9 220 aa13.39□□□□□ -0.27
USP42-201ENST00000306177 TRGV3P03979 118 aa13.39□□□□□ -0.27
USP42-201ENST00000306177 FAM89BQ8N5H3 189 aa13.39□□□□□ -0.27
USP42-201ENST00000306177 RNASE6Q93091 150 aaKnown RBP13.39□□□□□ -0.27
USP42-201ENST00000306177 THADAQ6YHU6 1953 aa13.39□□□□□ -0.27
USP42-201ENST00000306177 TCF24Q7RTU0 167 aa13.39□□□□□ -0.27
USP42-201ENST00000306177 NEU1Q99519 415 aa13.39□□□□□ -0.27
USP42-201ENST00000306177 SPRR3Q9UBC9 169 aa13.39□□□□□ -0.27
USP42-201ENST00000306177 GPX4P36969 197 aaPredicted RBP13.39□□□□□ -0.27
USP42-201ENST00000306177 DLX6P56179 175 aa13.39□□□□□ -0.27
USP42-201ENST00000306177 EFNB1P98172 346 aa13.39□□□□□ -0.27
USP42-201ENST00000306177 CLDND2Q8NHS1 167 aa13.39□□□□□ -0.27
USP42-201ENST00000306177 FAM131CQ96AQ9 280 aa13.39□□□□□ -0.27
USP42-201ENST00000306177 ZNF319Q9P2F9 582 aa13.39□□□□□ -0.27
USP42-201ENST00000306177 IGHV3OR16-12A0A075B7B8 117 aa13.39□□□□□ -0.27
USP42-201ENST00000306177 SNRPD3P62318 126 aaKnown RBP13.39□□□□□ -0.27
USP42-201ENST00000306177 WDR82Q6UXN9 313 aa13.39□□□□□ -0.27
USP42-201ENST00000306177 OR10S1Q8NGN2 331 aa13.39□□□□□ -0.27
USP42-201ENST00000306177 SMIM12Q96EX1 92 aa13.39□□□□□ -0.27
USP42-201ENST00000306177 HEATR5BQ9P2D3 2071 aa13.38□□□□□ -0.27
USP42-201ENST00000306177 YPEL1O60688 119 aa13.38□□□□□ -0.27
USP42-201ENST00000306177 NUDT3O95989 172 aa13.38□□□□□ -0.27
USP42-201ENST00000306177 NBEAP1P0C6P0 100 aa13.38□□□□□ -0.27
USP42-201ENST00000306177 TRGC1P0CF51 173 aa13.38□□□□□ -0.27
USP42-201ENST00000306177 EGR1P18146 543 aa13.38□□□□□ -0.27
USP42-201ENST00000306177 YPEL2Q96QA6 119 aa13.38□□□□□ -0.27
USP42-201ENST00000306177 DUX5Q96PT3 197 aa13.38□□□□□ -0.27
USP42-201ENST00000306177 SEMA5BQ9P283 1151 aa13.38□□□□□ -0.27
USP42-201ENST00000306177 IGKV3D-15A0A087WSY6 115 aa13.38□□□□□ -0.27
USP42-201ENST00000306177 TRAV14DV4A0A0A6YYC5 116 aa13.38□□□□□ -0.27
USP42-201ENST00000306177 ZNF497Q6ZNH5 498 aa13.38□□□□□ -0.27
USP42-201ENST00000306177 CACNG8Q8WXS5 425 aa13.38□□□□□ -0.27
USP42-201ENST00000306177 C18orf12Q96KH6 178 aa13.38□□□□□ -0.27
USP42-201ENST00000306177 IGKV3-15P01624 115 aa13.38□□□□□ -0.27
USP42-201ENST00000306177 TCTAP57738 103 aa13.38□□□□□ -0.27
USP42-201ENST00000306177 SPATA45Q537H7 98 aa13.38□□□□□ -0.27
USP42-201ENST00000306177 RNASEH2CQ8TDP1 164 aaKnown RBP13.38□□□□□ -0.27
USP42-201ENST00000306177 EFNA2O43921 213 aa13.37□□□□□ -0.27
USP42-201ENST00000306177 STAG3L2P0CL84 134 aa13.37□□□□□ -0.27
USP42-201ENST00000306177 ICAM4Q14773 271 aa13.37□□□□□ -0.27
USP42-201ENST00000306177 AMMECR1LQ6DCA0 310 aa13.37□□□□□ -0.27
USP42-201ENST00000306177 FBXL7Q9UJT9 491 aa13.37□□□□□ -0.27
USP42-201ENST00000306177 FNDC1Q4ZHG4 1894 aaPredicted RBP13.37□□□□□ -0.27
USP42-201ENST00000306177 UBE2L6O14933 153 aa13.37□□□□□ -0.27
USP42-201ENST00000306177 ZNF324O75467 553 aaPredicted RBP13.37□□□□□ -0.27
USP42-201ENST00000306177 CRYGSP22914 178 aa13.37□□□□□ -0.27
USP42-201ENST00000306177 ZIC4Q8N9L1 334 aa13.37□□□□□ -0.27
USP42-201ENST00000306177 MDC1Q14676 2089 aaKnown RBP13.37□□□□□ -0.27
USP42-201ENST00000306177 HAX1O00165 279 aa13.37□□□□□ -0.27
USP42-201ENST00000306177 CGAP01215 116 aa13.37□□□□□ -0.27
USP42-201ENST00000306177 C19orf54Q5BKX5 351 aa13.37□□□□□ -0.27
USP42-201ENST00000306177 FAM168AQ92567 244 aa13.37□□□□□ -0.27
USP42-201ENST00000306177 IGKV1D-13A0A0B4J2D9 117 aa13.37□□□□□ -0.27
USP42-201ENST00000306177 IGKV1-13P0DP09 117 aa13.37□□□□□ -0.27
USP42-201ENST00000306177 GAS1P54826 345 aa13.37□□□□□ -0.27
USP42-201ENST00000306177 KIAA1644Q3SXP7 199 aa13.37□□□□□ -0.27
USP42-201ENST00000306177 PAQR4Q8N4S7 273 aaPredicted RBP13.37□□□□□ -0.27
USP42-201ENST00000306177 ARPC1AQ92747 370 aa13.37□□□□□ -0.27
USP42-201ENST00000306177 C21orf62Q9NYP8 219 aa13.37□□□□□ -0.27
USP42-201ENST00000306177 CARHSP1Q9Y2V2 147 aaKnown RBP13.37□□□□□ -0.27
USP42-201ENST00000306177 CACNA1DQ01668 2161 aa13.36□□□□□ -0.27
USP42-201ENST00000306177 SAA2-SAA4A0A096LPE2 208 aa13.36□□□□□ -0.27
USP42-201ENST00000306177 FOXI3A8MTJ6 420 aaPredicted RBP13.36□□□□□ -0.27
USP42-201ENST00000306177 SAA2P0DJI9 122 aaPredicted RBP13.36□□□□□ -0.27
USP42-201ENST00000306177 ZNF525Q8N782 197 aa13.36□□□□□ -0.27
USP42-201ENST00000306177 FOXA2Q9Y261 457 aaPredicted RBP13.36□□□□□ -0.27
USP42-201ENST00000306177 TRAV24A0A0B4J272 114 aa13.36□□□□□ -0.27
USP42-201ENST00000306177 ZNF25P17030 456 aaPredicted RBP13.36□□□□□ -0.27
USP42-201ENST00000306177 CDX1P47902 265 aaPredicted RBP13.36□□□□□ -0.27
USP42-201ENST00000306177 OR10AG1Q8NH19 301 aa13.36□□□□□ -0.27
USP42-201ENST00000306177 GPR82Q96P67 336 aa13.36□□□□□ -0.27
USP42-201ENST00000306177 MIEN1Q9BRT3 115 aa13.36□□□□□ -0.27
USP42-201ENST00000306177 ESPL1Q14674 2120 aa13.36□□□□□ -0.27
USP42-201ENST00000306177 INTS1Q8N201 2190 aaKnown RBP13.36□□□□□ -0.27
USP42-201ENST00000306177 HIST1H1AQ02539 215 aaPredicted RBP13.36□□□□□ -0.27
USP42-201ENST00000306177 COL5A1-AS1Q5SY13 56 aa13.36□□□□□ -0.27
USP42-201ENST00000306177 PPP1R27Q86WC6 154 aa13.36□□□□□ -0.27
USP42-201ENST00000306177 FOLR2P14207 255 aa13.36□□□□□ -0.27
USP42-201ENST00000306177 HBBP68871 147 aa13.36□□□□□ -0.27
USP42-201ENST00000306177 ARTNQ5T4W7 220 aa13.36□□□□□ -0.27
USP42-201ENST00000306177 SNRNP200O75643 2136 aaKnown RBP13.35□□□□□ -0.27
USP42-201ENST00000306177 IGHV1-18A0A0C4DH31 117 aa13.35□□□□□ -0.27
USP42-201ENST00000306177 CCL3L1P16619 93 aa13.35□□□□□ -0.27
USP42-201ENST00000306177 MPZP25189 248 aa13.35□□□□□ -0.27
USP42-201ENST00000306177 C21orf62-AS1Q17RA5 79 aa13.35□□□□□ -0.27
USP42-201ENST00000306177 GGNQ86UU5 652 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms