RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 SPCS1Q9Y6A9 102 aa6.5□□□□□ -1.37
SF3B3-201ENST00000302516 R4GN57 208 aa6.5□□□□□ -1.37
SF3B3-201ENST00000302516 NLRC5Q86WI3 1866 aa6.5□□□□□ -1.37
SF3B3-201ENST00000302516 PGPEP1LA6NFU8 196 aa6.5□□□□□ -1.37
SF3B3-201ENST00000302516 C9orf50Q5SZB4 431 aa6.5□□□□□ -1.37
SF3B3-201ENST00000302516 ZNF600Q6ZNG1 722 aa6.5□□□□□ -1.37
SF3B3-201ENST00000302516 SPANXA1Q9NS26 97 aa6.5□□□□□ -1.37
SF3B3-201ENST00000302516 ASIPP42127 132 aa6.5□□□□□ -1.37
SF3B3-201ENST00000302516 SSBP4Q9BWG4 385 aaPredicted RBP6.5□□□□□ -1.37
SF3B3-201ENST00000302516 ZNF703Q9H7S9 590 aaPredicted RBP6.5□□□□□ -1.37
SF3B3-201ENST00000302516 A0A1W2PQF6 199 aa6.5□□□□□ -1.37
SF3B3-201ENST00000302516 MEX3AA1L020 520 aaKnown RBP6.5□□□□□ -1.37
SF3B3-201ENST00000302516 FOXC1Q12948 553 aa6.5□□□□□ -1.37
SF3B3-201ENST00000302516 HCP5Q6MZN7 132 aa6.5□□□□□ -1.37
SF3B3-201ENST00000302516 SDF2L1Q9HCN8 221 aa6.5□□□□□ -1.37
SF3B3-201ENST00000302516 PPBPP02775 128 aa6.5□□□□□ -1.37
SF3B3-201ENST00000302516 KLRB1Q12918 225 aa6.5□□□□□ -1.37
SF3B3-201ENST00000302516 LAIR2Q6ISS4 152 aa6.5□□□□□ -1.37
SF3B3-201ENST00000302516 CLEC2AQ6UVW9 174 aa6.5□□□□□ -1.37
SF3B3-201ENST00000302516 ACP7Q6ZNF0 438 aa6.5□□□□□ -1.37
SF3B3-201ENST00000302516 KLF14Q8TD94 323 aaPredicted RBP6.5□□□□□ -1.37
SF3B3-201ENST00000302516 AMELYQ99218 206 aa6.5□□□□□ -1.37
SF3B3-201ENST00000302516 YAE1D1Q9NRH1 226 aa6.5□□□□□ -1.37
SF3B3-201ENST00000302516 A0A1W2PPE3 182 aa6.5□□□□□ -1.37
SF3B3-201ENST00000302516 TMEM171Q8WVE6 324 aa6.5□□□□□ -1.37
SF3B3-201ENST00000302516 RTBDNQ9BSG5 229 aaPredicted RBP6.5□□□□□ -1.37
SF3B3-201ENST00000302516 RNF224P0DH78 156 aa6.49□□□□□ -1.37
SF3B3-201ENST00000302516 CACNG7P62955 275 aa6.49□□□□□ -1.37
SF3B3-201ENST00000302516 MEIG1Q5JSS6 88 aa6.49□□□□□ -1.37
SF3B3-201ENST00000302516 FAM159AQ6UWV7 190 aa6.49□□□□□ -1.37
SF3B3-201ENST00000302516 SLC22A18ASQ8N1D0 253 aa6.49□□□□□ -1.37
SF3B3-201ENST00000302516 RPRMQ9NS64 109 aa6.49□□□□□ -1.37
SF3B3-201ENST00000302516 TRAV9-2A0A087WT02 112 aa6.49□□□□□ -1.37
SF3B3-201ENST00000302516 SYNGR3O43761 229 aa6.49□□□□□ -1.37
SF3B3-201ENST00000302516 PRSS2P07478 247 aa6.49□□□□□ -1.37
SF3B3-201ENST00000302516 DEFB124Q8NES8 71 aa6.49□□□□□ -1.37
SF3B3-201ENST00000302516 MBD3L1Q8WWY6 194 aa6.49□□□□□ -1.37
SF3B3-201ENST00000302516 TNRC6AQ8NDV7 1962 aaKnown RBP6.49□□□□□ -1.37
SF3B3-201ENST00000302516 TRAV1-1A0A0B4J248 108 aa6.49□□□□□ -1.37
SF3B3-201ENST00000302516 C3AR1Q16581 482 aa6.49□□□□□ -1.37
SF3B3-201ENST00000302516 ITLN1Q8WWA0 313 aa6.49□□□□□ -1.37
SF3B3-201ENST00000302516 COL4A1P02462 1669 aa6.49□□□□□ -1.37
SF3B3-201ENST00000302516 TRAV39A0A0B4J263 110 aa6.49□□□□□ -1.37
SF3B3-201ENST00000302516 A0A0G2JK05 382 aa6.49□□□□□ -1.37
SF3B3-201ENST00000302516 NPPCP23582 126 aa6.49□□□□□ -1.37
SF3B3-201ENST00000302516 ICAM4Q14773 271 aa6.49□□□□□ -1.37
SF3B3-201ENST00000302516 UNQ5815/PRO19632Q6UWF5 114 aa6.49□□□□□ -1.37
SF3B3-201ENST00000302516 IFI27L2Q9H2X8 130 aa6.49□□□□□ -1.37
SF3B3-201ENST00000302516 OTORQ9NRC9 128 aa6.49□□□□□ -1.37
SF3B3-201ENST00000302516 IGHV3-21A0A0B4J1V1 117 aa6.49□□□□□ -1.37
SF3B3-201ENST00000302516 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.49□□□□□ -1.37
SF3B3-201ENST00000302516 GPR183P32249 361 aa6.49□□□□□ -1.37
SF3B3-201ENST00000302516 SPEM2Q0P670 501 aa6.49□□□□□ -1.37
SF3B3-201ENST00000302516 SRSF5Q13243 272 aaKnown RBP6.49□□□□□ -1.37
SF3B3-201ENST00000302516 GDF15Q99988 308 aa6.49□□□□□ -1.37
SF3B3-201ENST00000302516 TMEM160Q9NX00 188 aa6.49□□□□□ -1.37
SF3B3-201ENST00000302516 A0A1B0GWB2 263 aa6.49□□□□□ -1.37
SF3B3-201ENST00000302516 APOHP02749 345 aaPredicted RBP6.49□□□□□ -1.37
SF3B3-201ENST00000302516 COX6A1P12074 109 aa6.49□□□□□ -1.37
SF3B3-201ENST00000302516 IGFBP3P17936 291 aaPredicted RBP6.49□□□□□ -1.37
SF3B3-201ENST00000302516 SIGLEC14Q08ET2 396 aa6.49□□□□□ -1.37
SF3B3-201ENST00000302516 ATOH7Q8N100 152 aa6.49□□□□□ -1.37
SF3B3-201ENST00000302516 ZNF418Q8TF45 676 aaPredicted RBP6.49□□□□□ -1.37
SF3B3-201ENST00000302516 LAMTOR2Q9Y2Q5 125 aa6.49□□□□□ -1.37
SF3B3-201ENST00000302516 DERL1Q9BUN8 251 aa6.49□□□□□ -1.37
SF3B3-201ENST00000302516 C11orf68Q9H3H3 251 aaKnown RBP6.49□□□□□ -1.37
SF3B3-201ENST00000302516 SMPXQ9UHP9 88 aa6.49□□□□□ -1.37
SF3B3-201ENST00000302516 WNK2Q9Y3S1 2297 aa6.49□□□□□ -1.37
SF3B3-201ENST00000302516 OTX1P32242 354 aaPredicted RBP6.48□□□□□ -1.37
SF3B3-201ENST00000302516 NXT2Q9NPJ8 142 aaKnown RBP6.48□□□□□ -1.37
SF3B3-201ENST00000302516 INTS1Q8N201 2190 aaKnown RBP6.48□□□□□ -1.37
SF3B3-201ENST00000302516 Q5BKY6 102 aa6.48□□□□□ -1.37
SF3B3-201ENST00000302516 Q6ZT83 130 aa6.48□□□□□ -1.37
SF3B3-201ENST00000302516 SCGB3A1Q96QR1 104 aa6.48□□□□□ -1.37
SF3B3-201ENST00000302516 B9A039 149 aa6.48□□□□□ -1.37
SF3B3-201ENST00000302516 SLC25A53Q5H9E4 307 aa6.48□□□□□ -1.37
SF3B3-201ENST00000302516 C1QTNF5Q9BXJ0 243 aa6.48□□□□□ -1.37
SF3B3-201ENST00000302516 CA1P00915 261 aaPredicted RBP6.48□□□□□ -1.37
SF3B3-201ENST00000302516 RPP25Q9BUL9 199 aaKnown RBP6.48□□□□□ -1.37
SF3B3-201ENST00000302516 CFHR5Q9BXR6 569 aa6.48□□□□□ -1.37
SF3B3-201ENST00000302516 OSTCQ9NRP0 149 aa6.48□□□□□ -1.37
SF3B3-201ENST00000302516 RBMY1BA6NDE4 496 aaKnown RBP6.48□□□□□ -1.37
SF3B3-201ENST00000302516 RBMY1EA6NEQ0 496 aaKnown RBP6.48□□□□□ -1.37
SF3B3-201ENST00000302516 HIGD1CA8MV81 97 aa6.48□□□□□ -1.37
SF3B3-201ENST00000302516 PLAUP00749 431 aa6.48□□□□□ -1.37
SF3B3-201ENST00000302516 RBMY1DP0C7P1 496 aaKnown RBP6.48□□□□□ -1.37
SF3B3-201ENST00000302516 RBMY1A1P0DJD3 496 aaKnown RBP6.48□□□□□ -1.37
SF3B3-201ENST00000302516 RBMY1CP0DJD4 496 aa6.48□□□□□ -1.37
SF3B3-201ENST00000302516 NUTF2P61970 127 aaKnown RBP6.48□□□□□ -1.37
SF3B3-201ENST00000302516 NR2C2APQ86WQ0 139 aa6.48□□□□□ -1.37
SF3B3-201ENST00000302516 ASCL2Q99929 193 aa6.48□□□□□ -1.37
SF3B3-201ENST00000302516 FOXD3Q9UJU5 478 aaPredicted RBP6.48□□□□□ -1.37
SF3B3-201ENST00000302516 FGF16O43320 207 aa6.48□□□□□ -1.37
SF3B3-201ENST00000302516 RNF222A6NCQ9 220 aa6.48□□□□□ -1.37
SF3B3-201ENST00000302516 HIST1H2BKO60814 126 aa6.48□□□□□ -1.37
SF3B3-201ENST00000302516 CEACAM4O75871 244 aa6.48□□□□□ -1.37
SF3B3-201ENST00000302516 IGKV3-11P04433 115 aa6.48□□□□□ -1.37
SF3B3-201ENST00000302516 HIST1H2BJP06899 126 aa6.48□□□□□ -1.37
SF3B3-201ENST00000302516 CCL4P13236 92 aa6.48□□□□□ -1.37
SF3B3-201ENST00000302516 HIST1H2BOP23527 126 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms