RNA–Protein interactions for RNA: ENST00000302316.12

CCDC7-202, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,129 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-202ENST00000302316 FBLN7Q53RD9 439 aa10.4□□□□□ -0.74
CCDC7-202ENST00000302316 PPP1R27Q86WC6 154 aa10.4□□□□□ -0.74
CCDC7-202ENST00000302316 WFDC11Q8NEX6 87 aa10.4□□□□□ -0.74
CCDC7-202ENST00000302316 NDUFA4L2Q9NRX3 87 aa10.4□□□□□ -0.74
CCDC7-202ENST00000302316 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.4□□□□□ -0.74
CCDC7-202ENST00000302316 J3QLI3 93 aa10.39□□□□□ -0.75
CCDC7-202ENST00000302316 AVPP01185 164 aa10.39□□□□□ -0.75
CCDC7-202ENST00000302316 OR8U8P0C7N1 319 aa10.39□□□□□ -0.75
CCDC7-202ENST00000302316 TMEM11P17152 192 aa10.39□□□□□ -0.75
CCDC7-202ENST00000302316 GNB1P62873 340 aa10.39□□□□□ -0.75
CCDC7-202ENST00000302316 SLC38A11Q08AI6 406 aa10.39□□□□□ -0.75
CCDC7-202ENST00000302316 FAM74A1Q5RGS3 127 aa10.39□□□□□ -0.75
CCDC7-202ENST00000302316 SLC24A4Q8NFF2 622 aa10.39□□□□□ -0.75
CCDC7-202ENST00000302316 OR10P1Q8NGE3 313 aa10.39□□□□□ -0.75
CCDC7-202ENST00000302316 TMED6Q8WW62 240 aa10.39□□□□□ -0.75
CCDC7-202ENST00000302316 CR1P17927 2039 aa10.39□□□□□ -0.75
CCDC7-202ENST00000302316 A0A1W2PN81 502 aa10.39□□□□□ -0.75
CCDC7-202ENST00000302316 NDUFA3O95167 84 aa10.39□□□□□ -0.75
CCDC7-202ENST00000302316 FAM106CPP0CH98 169 aa10.39□□□□□ -0.75
CCDC7-202ENST00000302316 NPY1RP25929 384 aa10.39□□□□□ -0.75
CCDC7-202ENST00000302316 CHRNA7P36544 502 aa10.39□□□□□ -0.75
CCDC7-202ENST00000302316 RAB14P61106 215 aa10.39□□□□□ -0.75
CCDC7-202ENST00000302316 HSD17B11Q8NBQ5 300 aa10.39□□□□□ -0.75
CCDC7-202ENST00000302316 NPBQ8NG41 125 aa10.39□□□□□ -0.75
CCDC7-202ENST00000302316 OR10W1Q8NGF6 305 aa10.39□□□□□ -0.75
CCDC7-202ENST00000302316 PCNPQ8WW12 178 aaKnown RBP10.39□□□□□ -0.75
CCDC7-202ENST00000302316 FASNP49327 2511 aaKnown RBP10.39□□□□□ -0.75
CCDC7-202ENST00000302316 A0A0U1RQK1 487 aa10.38□□□□□ -0.75
CCDC7-202ENST00000302316 PMS2P5A8MQ11 134 aa10.38□□□□□ -0.75
CCDC7-202ENST00000302316 E7EUB6 86 aa10.38□□□□□ -0.75
CCDC7-202ENST00000302316 SCAF4O95104 1147 aaKnown RBP10.38□□□□□ -0.75
CCDC7-202ENST00000302316 MAS1LP35410 378 aa10.38□□□□□ -0.75
CCDC7-202ENST00000302316 RPL27AP46776 148 aaKnown RBP10.38□□□□□ -0.75
CCDC7-202ENST00000302316 RAB11AP62491 216 aa10.38□□□□□ -0.75
CCDC7-202ENST00000302316 EBI3Q14213 229 aa10.38□□□□□ -0.75
CCDC7-202ENST00000302316 KLF17Q5JT82 389 aaPredicted RBP10.38□□□□□ -0.75
CCDC7-202ENST00000302316 FAM120AOSQ5T036 256 aa10.38□□□□□ -0.75
CCDC7-202ENST00000302316 SLC25A24Q6NUK1 477 aa10.38□□□□□ -0.75
CCDC7-202ENST00000302316 Q8N6K4 173 aa10.38□□□□□ -0.75
CCDC7-202ENST00000302316 PINX1Q96BK5 328 aaKnown RBP10.38□□□□□ -0.75
CCDC7-202ENST00000302316 TNCP24821 2201 aa10.38□□□□□ -0.75
CCDC7-202ENST00000302316 CGB1A6NKQ9 187 aa10.37□□□□□ -0.75
CCDC7-202ENST00000302316 NCBP2LA6PVI3 153 aaKnown RBP10.37□□□□□ -0.75
CCDC7-202ENST00000302316 FBXO24O75426 580 aa10.37□□□□□ -0.75
CCDC7-202ENST00000302316 IFNA5P01569 189 aa10.37□□□□□ -0.75
CCDC7-202ENST00000302316 COMPP49747 757 aaPredicted RBP10.37□□□□□ -0.75
CCDC7-202ENST00000302316 EIF5AL1Q6IS14 154 aaKnown RBP10.37□□□□□ -0.75
CCDC7-202ENST00000302316 ETV3LQ6ZN32 361 aa10.37□□□□□ -0.75
CCDC7-202ENST00000302316 ARV1Q9H2C2 271 aa10.37□□□□□ -0.75
CCDC7-202ENST00000302316 FAM96BQ9Y3D0 163 aa10.37□□□□□ -0.75
CCDC7-202ENST00000302316 HECTD1Q9ULT8 2610 aa10.37□□□□□ -0.75
CCDC7-202ENST00000302316 RPS10-NUDT3A0A1W2PQS6 291 aa10.37□□□□□ -0.75
CCDC7-202ENST00000302316 CA2P00918 260 aa10.37□□□□□ -0.75
CCDC7-202ENST00000302316 IFNA4P05014 189 aa10.37□□□□□ -0.75
CCDC7-202ENST00000302316 ERHP84090 104 aaKnown RBP10.37□□□□□ -0.75
CCDC7-202ENST00000302316 C5orf64Q2M2E5 130 aa10.37□□□□□ -0.75
CCDC7-202ENST00000302316 TMEM170AQ8WVE7 144 aa10.37□□□□□ -0.75
CCDC7-202ENST00000302316 FOXC2Q99958 501 aa10.37□□□□□ -0.75
CCDC7-202ENST00000302316 GINS3Q9BRX5 216 aa10.37□□□□□ -0.75
CCDC7-202ENST00000302316 CREBBPQ92793 2442 aa10.37□□□□□ -0.75
CCDC7-202ENST00000302316 PDZD2O15018 2839 aa10.36□□□□□ -0.75
CCDC7-202ENST00000302316 UBE2L5PA0A1B0GUS4 154 aa10.36□□□□□ -0.75
CCDC7-202ENST00000302316 A0A1B0GW64 132 aa10.36□□□□□ -0.75
CCDC7-202ENST00000302316 FCN1O00602 326 aa10.36□□□□□ -0.75
CCDC7-202ENST00000302316 SNCAP37840 140 aa10.36□□□□□ -0.75
CCDC7-202ENST00000302316 ATP6V1FQ16864 119 aa10.36□□□□□ -0.75
CCDC7-202ENST00000302316 CLLU1Q5K131 121 aa10.36□□□□□ -0.75
CCDC7-202ENST00000302316 TMEM147Q9BVK8 224 aa10.36□□□□□ -0.75
CCDC7-202ENST00000302316 SH3BGRL3Q9H299 93 aa10.36□□□□□ -0.75
CCDC7-202ENST00000302316 INS-IGF2F8WCM5 200 aa10.36□□□□□ -0.75
CCDC7-202ENST00000302316 ATP6V0CP27449 155 aa10.36□□□□□ -0.75
CCDC7-202ENST00000302316 WT1-ASQ06250 92 aa10.36□□□□□ -0.75
CCDC7-202ENST00000302316 CYB5R2Q6BCY4 276 aa10.36□□□□□ -0.75
CCDC7-202ENST00000302316 MRPL41Q8IXM3 137 aaKnown RBP10.36□□□□□ -0.75
CCDC7-202ENST00000302316 SRSF12Q8WXF0 261 aaKnown RBP10.36□□□□□ -0.75
CCDC7-202ENST00000302316 SLC25A32Q9H2D1 315 aa10.36□□□□□ -0.75
CCDC7-202ENST00000302316 UQCC1Q9NVA1 299 aa10.36□□□□□ -0.75
CCDC7-202ENST00000302316 C1RLQ9NZP8 487 aa10.36□□□□□ -0.75
CCDC7-202ENST00000302316 CNIH1O95406 144 aa10.35□□□□□ -0.75
CCDC7-202ENST00000302316 FBP1P09467 338 aa10.35□□□□□ -0.75
CCDC7-202ENST00000302316 OR13C7P0DN81 318 aa10.35□□□□□ -0.75
CCDC7-202ENST00000302316 RNASE2P10153 161 aaKnown RBP10.35□□□□□ -0.75
CCDC7-202ENST00000302316 SSBP2P81877 361 aaPredicted RBP10.35□□□□□ -0.75
CCDC7-202ENST00000302316 RUNX1Q01196 453 aa10.35□□□□□ -0.75
CCDC7-202ENST00000302316 NDUFA5Q16718 116 aa10.35□□□□□ -0.75
CCDC7-202ENST00000302316 BSXQ3C1V8 233 aa10.35□□□□□ -0.75
CCDC7-202ENST00000302316 SCGB1C1Q8TD33 95 aa10.35□□□□□ -0.75
CCDC7-202ENST00000302316 MEGF9Q9H1U4 602 aa10.35□□□□□ -0.75
CCDC7-202ENST00000302316 SOX21Q9Y651 276 aaPredicted RBP10.35□□□□□ -0.75
CCDC7-202ENST00000302316 CELSR1Q9NYQ6 3014 aa10.35□□□□□ -0.75
CCDC7-202ENST00000302316 ITPR2Q14571 2701 aa10.35□□□□□ -0.75
CCDC7-202ENST00000302316 PRRC2AP48634 2157 aaKnown RBP10.34□□□□□ -0.75
CCDC7-202ENST00000302316 IGLC7A0M8Q6 106 aa10.34□□□□□ -0.75
CCDC7-202ENST00000302316 SMAD7O15105 426 aaKnown RBP10.34□□□□□ -0.75
CCDC7-202ENST00000302316 NMBP08949 121 aa10.34□□□□□ -0.75
CCDC7-202ENST00000302316 SEC11BP0C7V7 166 aa10.34□□□□□ -0.75
CCDC7-202ENST00000302316 SPP1P10451 314 aa10.34□□□□□ -0.75
CCDC7-202ENST00000302316 TUSC1Q2TAM9 212 aa10.34□□□□□ -0.75
CCDC7-202ENST00000302316 C2orf83Q53S99 150 aa10.34□□□□□ -0.75
CCDC7-202ENST00000302316 CIARTQ8N365 385 aaPredicted RBP10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms