RNA–Protein interactions for RNA: ENST00000297350.8

TNFRSF11B-201, Transcript of TNF receptor superfamily member 11b, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF11B, Length 2,402 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11B-201ENST00000297350 J3QR06 171 aa8.2□□□□□ -1.1
TNFRSF11B-201ENST00000297350 GPX4P36969 197 aaPredicted RBP8.2□□□□□ -1.1
TNFRSF11B-201ENST00000297350 C4orf17Q53FE4 359 aa8.2□□□□□ -1.1
TNFRSF11B-201ENST00000297350 GCSAMLQ5JQS6 135 aa8.2□□□□□ -1.1
TNFRSF11B-201ENST00000297350 FAM209BQ5JX69 171 aa8.2□□□□□ -1.1
TNFRSF11B-201ENST00000297350 GFI1BQ5VTD9 330 aa8.2□□□□□ -1.1
TNFRSF11B-201ENST00000297350 VHLLQ6RSH7 139 aa8.2□□□□□ -1.1
TNFRSF11B-201ENST00000297350 NECAP1Q8NC96 275 aa8.2□□□□□ -1.1
TNFRSF11B-201ENST00000297350 MRPL32Q9BYC8 188 aaKnown RBP8.2□□□□□ -1.1
TNFRSF11B-201ENST00000297350 TECRQ9NZ01 308 aaKnown RBP8.2□□□□□ -1.1
TNFRSF11B-201ENST00000297350 FUT9Q9Y231 359 aa8.2□□□□□ -1.1
TNFRSF11B-201ENST00000297350 C16orf97H3BN30 126 aa8.2□□□□□ -1.1
TNFRSF11B-201ENST00000297350 UBE2G2P60604 165 aa8.2□□□□□ -1.1
TNFRSF11B-201ENST00000297350 COX19Q49B96 90 aa8.2□□□□□ -1.1
TNFRSF11B-201ENST00000297350 LINC00311Q8N616 119 aa8.2□□□□□ -1.1
TNFRSF11B-201ENST00000297350 RBMXL3Q8N7X1 1067 aaKnown RBP8.2□□□□□ -1.1
TNFRSF11B-201ENST00000297350 ZNF596Q8TC21 504 aa8.2□□□□□ -1.1
TNFRSF11B-201ENST00000297350 C1orf159Q96HA4 380 aa8.2□□□□□ -1.1
TNFRSF11B-201ENST00000297350 ELOVL1Q9BW60 279 aa8.2□□□□□ -1.1
TNFRSF11B-201ENST00000297350 PRDM13Q9H4Q3 707 aa8.2□□□□□ -1.1
TNFRSF11B-201ENST00000297350 TET2Q6N021 2002 aaPredicted RBP8.19□□□□□ -1.1
TNFRSF11B-201ENST00000297350 DIDO1Q9BTC0 2240 aaKnown RBP8.19□□□□□ -1.1
TNFRSF11B-201ENST00000297350 TRBV9A0A0B4J1U6 114 aa8.19□□□□□ -1.1
TNFRSF11B-201ENST00000297350 TRAV20A0A0B4J274 112 aa8.19□□□□□ -1.1
TNFRSF11B-201ENST00000297350 A0A1W2PN81 502 aa8.19□□□□□ -1.1
TNFRSF11B-201ENST00000297350 PRRG2O14669 202 aa8.19□□□□□ -1.1
TNFRSF11B-201ENST00000297350 OR10J4P0C629 311 aa8.19□□□□□ -1.1
TNFRSF11B-201ENST00000297350 CT45A6P0DMU7 189 aa8.19□□□□□ -1.1
TNFRSF11B-201ENST00000297350 CT45A5P0DMU8 189 aa8.19□□□□□ -1.1
TNFRSF11B-201ENST00000297350 CT45A7P0DMV0 189 aa8.19□□□□□ -1.1
TNFRSF11B-201ENST00000297350 IL3RAP26951 378 aa8.19□□□□□ -1.1
TNFRSF11B-201ENST00000297350 CHRNA7P36544 502 aa8.19□□□□□ -1.1
TNFRSF11B-201ENST00000297350 CNN1P51911 297 aaKnown RBP8.19□□□□□ -1.1
TNFRSF11B-201ENST00000297350 YPEL3P61236 119 aaPredicted RBP8.19□□□□□ -1.1
TNFRSF11B-201ENST00000297350 RPL15P61313 204 aaKnown RBP8.19□□□□□ -1.1
TNFRSF11B-201ENST00000297350 TMEM177Q53S58 311 aa8.19□□□□□ -1.1
TNFRSF11B-201ENST00000297350 SPRNQ5BIV9 151 aa8.19□□□□□ -1.1
TNFRSF11B-201ENST00000297350 FAM78BQ5VT40 261 aa8.19□□□□□ -1.1
TNFRSF11B-201ENST00000297350 OR10G8Q8NGN5 311 aa8.19□□□□□ -1.1
TNFRSF11B-201ENST00000297350 C17orf100A8MU93 164 aa8.19□□□□□ -1.1
TNFRSF11B-201ENST00000297350 MKRN2OSH3BPM6 223 aa8.19□□□□□ -1.1
TNFRSF11B-201ENST00000297350 AMBPP02760 352 aa8.19□□□□□ -1.1
TNFRSF11B-201ENST00000297350 LINC00869P0C866 280 aa8.19□□□□□ -1.1
TNFRSF11B-201ENST00000297350 USF1P22415 310 aaPredicted RBP8.19□□□□□ -1.1
TNFRSF11B-201ENST00000297350 DEFA6Q01524 100 aa8.19□□□□□ -1.1
TNFRSF11B-201ENST00000297350 RELQ04864 619 aaPredicted RBP8.19□□□□□ -1.1
TNFRSF11B-201ENST00000297350 ANKRD39Q53RE8 183 aa8.19□□□□□ -1.1
TNFRSF11B-201ENST00000297350 TEX38Q6PEX7 206 aa8.19□□□□□ -1.1
TNFRSF11B-201ENST00000297350 C1orf229Q6ZS94 237 aaPredicted RBP8.19□□□□□ -1.1
TNFRSF11B-201ENST00000297350 PDPNQ86YL7 162 aa8.19□□□□□ -1.1
TNFRSF11B-201ENST00000297350 MRPL41Q8IXM3 137 aaKnown RBP8.19□□□□□ -1.1
TNFRSF11B-201ENST00000297350 PLPPR2Q96GM1 343 aa8.19□□□□□ -1.1
TNFRSF11B-201ENST00000297350 CCL13Q99616 98 aa8.19□□□□□ -1.1
TNFRSF11B-201ENST00000297350 RAI1Q7Z5J4 1906 aaPredicted RBP8.18□□□□□ -1.1
TNFRSF11B-201ENST00000297350 DSCAMO60469 2012 aa8.18□□□□□ -1.1
TNFRSF11B-201ENST00000297350 OR5G3P0C626 314 aa8.18□□□□□ -1.1
TNFRSF11B-201ENST00000297350 FAM216BQ8N7L0 139 aa8.18□□□□□ -1.1
TNFRSF11B-201ENST00000297350 OR5AN1Q8NGI8 311 aa8.18□□□□□ -1.1
TNFRSF11B-201ENST00000297350 SSMEM1Q8WWF3 244 aa8.18□□□□□ -1.1
TNFRSF11B-201ENST00000297350 TMEM186Q96B77 213 aa8.18□□□□□ -1.1
TNFRSF11B-201ENST00000297350 NOL4LQ96MY1 436 aaPredicted RBP8.18□□□□□ -1.1
TNFRSF11B-201ENST00000297350 ZNF714Q96N38 554 aa8.18□□□□□ -1.1
TNFRSF11B-201ENST00000297350 TRAPPC1Q9Y5R8 145 aa8.18□□□□□ -1.1
TNFRSF11B-201ENST00000297350 A0A0U1RQK1 487 aa8.18□□□□□ -1.1
TNFRSF11B-201ENST00000297350 SCO2A0A1W2PP80 73 aa8.18□□□□□ -1.1
TNFRSF11B-201ENST00000297350 A0A1W2PRE2 83 aa8.18□□□□□ -1.1
TNFRSF11B-201ENST00000297350 ZNF320A2RRD8 509 aa8.18□□□□□ -1.1
TNFRSF11B-201ENST00000297350 DLL1O00548 723 aa8.18□□□□□ -1.1
TNFRSF11B-201ENST00000297350 SELLP14151 372 aa8.18□□□□□ -1.1
TNFRSF11B-201ENST00000297350 PAX1P15863 534 aa8.18□□□□□ -1.1
TNFRSF11B-201ENST00000297350 SUB1P53999 127 aaKnown RBP eCLIP8.18□□□□□ -1.1
TNFRSF11B-201ENST00000297350 RPL31P62899 125 aaKnown RBP8.18□□□□□ -1.1
TNFRSF11B-201ENST00000297350 ERHP84090 104 aaKnown RBP8.18□□□□□ -1.1
TNFRSF11B-201ENST00000297350 PDZD11Q5EBL8 140 aa8.18□□□□□ -1.1
TNFRSF11B-201ENST00000297350 SGMS2Q8NHU3 365 aa8.18□□□□□ -1.1
TNFRSF11B-201ENST00000297350 LEAP2Q969E1 77 aa8.18□□□□□ -1.1
TNFRSF11B-201ENST00000297350 NGBQ9NPG2 151 aa8.18□□□□□ -1.1
TNFRSF11B-201ENST00000297350 IL36BQ9NZH7 164 aa8.18□□□□□ -1.1
TNFRSF11B-201ENST00000297350 YTHDF2Q9Y5A9 579 aaKnown RBP8.18□□□□□ -1.1
TNFRSF11B-201ENST00000297350 TEX50A0A1B0GTY4 177 aa8.17□□□□□ -1.1
TNFRSF11B-201ENST00000297350 DEFA4P12838 97 aa8.17□□□□□ -1.1
TNFRSF11B-201ENST00000297350 GNG10P50151 68 aa8.17□□□□□ -1.1
TNFRSF11B-201ENST00000297350 ZNF137PP52743 207 aa8.17□□□□□ -1.1
TNFRSF11B-201ENST00000297350 CD69Q07108 199 aa8.17□□□□□ -1.1
TNFRSF11B-201ENST00000297350 ZNF124Q15973 351 aa8.17□□□□□ -1.1
TNFRSF11B-201ENST00000297350 LBHQ53QV2 105 aaPredicted RBP8.17□□□□□ -1.1
TNFRSF11B-201ENST00000297350 TMEM167AQ8TBQ9 72 aa8.17□□□□□ -1.1
TNFRSF11B-201ENST00000297350 TMEM190Q8WZ59 177 aa8.17□□□□□ -1.1
TNFRSF11B-201ENST00000297350 NABP2Q9BQ15 211 aa8.17□□□□□ -1.1
TNFRSF11B-201ENST00000297350 DERL1Q9BUN8 251 aa8.17□□□□□ -1.1
TNFRSF11B-201ENST00000297350 COMMD5Q9GZQ3 224 aa8.17□□□□□ -1.1
TNFRSF11B-201ENST00000297350 JKAMPQ9P055 326 aa8.17□□□□□ -1.1
TNFRSF11B-201ENST00000297350 TRBV20OR9-2A0A075B6H5 130 aa8.17□□□□□ -1.1
TNFRSF11B-201ENST00000297350 SAA1P0DJI8 122 aaPredicted RBP8.17□□□□□ -1.1
TNFRSF11B-201ENST00000297350 RNASE2P10153 161 aaKnown RBP8.17□□□□□ -1.1
TNFRSF11B-201ENST00000297350 NDUFB7P17568 137 aa8.17□□□□□ -1.1
TNFRSF11B-201ENST00000297350 IGFBP2P18065 325 aa8.17□□□□□ -1.1
TNFRSF11B-201ENST00000297350 SELENOTP62341 195 aa8.17□□□□□ -1.1
TNFRSF11B-201ENST00000297350 RPL8P62917 257 aaKnown RBP8.17□□□□□ -1.1
TNFRSF11B-201ENST00000297350 FAM27E3Q08E93 113 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms