RNA–Protein interactions for RNA: ENST00000296215.7

SNIP1-201, Transcript of Smad nuclear interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNIP1, Length 4,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-201ENST00000296215 H0YJW9 148 aa9.89□□□□□ -0.83
SNIP1-201ENST00000296215 SAA2-SAA4A0A096LPE2 208 aa9.89□□□□□ -0.83
SNIP1-201ENST00000296215 PGLYRP1O75594 196 aaPredicted RBP9.89□□□□□ -0.83
SNIP1-201ENST00000296215 PRSS2P07478 247 aa9.89□□□□□ -0.83
SNIP1-201ENST00000296215 TFF3Q07654 80 aa9.89□□□□□ -0.83
SNIP1-201ENST00000296215 SPEM2Q0P670 501 aa9.89□□□□□ -0.83
SNIP1-201ENST00000296215 KLF17Q5JT82 389 aaPredicted RBP9.89□□□□□ -0.83
SNIP1-201ENST00000296215 CSDC2Q9Y534 153 aaKnown RBP9.89□□□□□ -0.83
SNIP1-201ENST00000296215 LOXHD1Q8IVV2 1947 aa9.89□□□□□ -0.83
SNIP1-201ENST00000296215 COL14A1Q05707 1796 aaKnown RBP9.89□□□□□ -0.83
SNIP1-201ENST00000296215 CCDC179H3BU77 68 aa9.89□□□□□ -0.83
SNIP1-201ENST00000296215 HBDP02042 147 aa9.89□□□□□ -0.83
SNIP1-201ENST00000296215 CTRLP40313 264 aa9.89□□□□□ -0.83
SNIP1-201ENST00000296215 PRSS53Q2L4Q9 553 aa9.89□□□□□ -0.83
SNIP1-201ENST00000296215 EBLN2Q6P2I7 272 aa9.89□□□□□ -0.83
SNIP1-201ENST00000296215 HEATR5AQ86XA9 2040 aa9.89□□□□□ -0.83
SNIP1-201ENST00000296215 CENPVL1A0A0U1RR11 272 aa9.89□□□□□ -0.83
SNIP1-201ENST00000296215 YPEL1O60688 119 aa9.89□□□□□ -0.83
SNIP1-201ENST00000296215 CD27P26842 260 aa9.89□□□□□ -0.83
SNIP1-201ENST00000296215 BCORP1Q8N888 145 aa9.89□□□□□ -0.83
SNIP1-201ENST00000296215 YPEL2Q96QA6 119 aa9.89□□□□□ -0.83
SNIP1-201ENST00000296215 SPANXB1Q9NS25 103 aaPredicted RBP9.89□□□□□ -0.83
SNIP1-201ENST00000296215 DEC1Q9P2X7 70 aa9.89□□□□□ -0.83
SNIP1-201ENST00000296215 MED12Q93074 2177 aa9.88□□□□□ -0.83
SNIP1-201ENST00000296215 MOSP00540 346 aa9.88□□□□□ -0.83
SNIP1-201ENST00000296215 CGAP01215 116 aa9.88□□□□□ -0.83
SNIP1-201ENST00000296215 CDAP32320 146 aa9.88□□□□□ -0.83
SNIP1-201ENST00000296215 H1FXQ92522 213 aaKnown RBP9.88□□□□□ -0.83
SNIP1-201ENST00000296215 DOCK9Q9BZ29 2069 aa9.88□□□□□ -0.83
SNIP1-201ENST00000296215 LAMTOR5O43504 91 aa9.88□□□□□ -0.83
SNIP1-201ENST00000296215 DPM2O94777 84 aa9.88□□□□□ -0.83
SNIP1-201ENST00000296215 FAM166AQ6J272 317 aa9.88□□□□□ -0.83
SNIP1-201ENST00000296215 GTSCR1Q86UQ5 136 aa9.88□□□□□ -0.83
SNIP1-201ENST00000296215 DNAJC30Q96LL9 226 aa9.88□□□□□ -0.83
SNIP1-201ENST00000296215 IL23AQ9NPF7 189 aa9.88□□□□□ -0.83
SNIP1-201ENST00000296215 STARD5Q9NSY2 213 aa9.88□□□□□ -0.83
SNIP1-201ENST00000296215 LTBRP36941 435 aa9.88□□□□□ -0.83
SNIP1-201ENST00000296215 PGFP49763 221 aa9.88□□□□□ -0.83
SNIP1-201ENST00000296215 VWC2Q2TAL6 325 aa9.88□□□□□ -0.83
SNIP1-201ENST00000296215 PIGYQ3MUY2 71 aa9.88□□□□□ -0.83
SNIP1-201ENST00000296215 SPATA12Q7Z6I5 190 aa9.88□□□□□ -0.83
SNIP1-201ENST00000296215 PPDPFQ9H3Y8 114 aa9.88□□□□□ -0.83
SNIP1-201ENST00000296215 RAXQ9Y2V3 346 aa9.88□□□□□ -0.83
SNIP1-201ENST00000296215 TAF1P21675 1872 aa9.88□□□□□ -0.83
SNIP1-201ENST00000296215 A0A1W2PPC4 97 aa9.87□□□□□ -0.83
SNIP1-201ENST00000296215 GGTLC3B5MD39 225 aa9.87□□□□□ -0.83
SNIP1-201ENST00000296215 SEC61GP60059 68 aa9.87□□□□□ -0.83
SNIP1-201ENST00000296215 SRSF1Q07955 248 aaKnown RBP eCLIP9.87□□□□□ -0.83
SNIP1-201ENST00000296215 DEFB123Q8N688 67 aa9.87□□□□□ -0.83
SNIP1-201ENST00000296215 H3BTX0 84 aa9.87□□□□□ -0.83
SNIP1-201ENST00000296215 FNDC7Q5VTL7 733 aa9.87□□□□□ -0.83
SNIP1-201ENST00000296215 CIARTQ8N365 385 aaPredicted RBP9.87□□□□□ -0.83
SNIP1-201ENST00000296215 S1PR3Q99500 378 aa9.87□□□□□ -0.83
SNIP1-201ENST00000296215 ATP23Q9Y6H3 246 aa9.87□□□□□ -0.83
SNIP1-201ENST00000296215 GBF1Q92538 1859 aa9.87□□□□□ -0.83
SNIP1-201ENST00000296215 K7EQS6 105 aa9.87□□□□□ -0.83
SNIP1-201ENST00000296215 IGKCP01834 107 aa9.87□□□□□ -0.83
SNIP1-201ENST00000296215 DEFB110Q30KQ9 67 aa9.87□□□□□ -0.83
SNIP1-201ENST00000296215 C2orf82Q6UX34 121 aa9.87□□□□□ -0.83
SNIP1-201ENST00000296215 ZNF818PQ6ZRF7 136 aa9.87□□□□□ -0.83
SNIP1-201ENST00000296215 FGF11Q92914 225 aa9.87□□□□□ -0.83
SNIP1-201ENST00000296215 ERHP84090 104 aaKnown RBP9.87□□□□□ -0.83
SNIP1-201ENST00000296215 ZNF474Q6S9Z5 364 aaPredicted RBP9.87□□□□□ -0.83
SNIP1-201ENST00000296215 ARFGEF2Q9Y6D5 1785 aa9.87□□□□□ -0.83
SNIP1-201ENST00000296215 NPIPB11E5RHQ5 1161 aa9.86□□□□□ -0.83
SNIP1-201ENST00000296215 REG1BP48304 166 aa9.86□□□□□ -0.83
SNIP1-201ENST00000296215 ZNF138P52744 262 aa9.86□□□□□ -0.83
SNIP1-201ENST00000296215 PAX9P55771 341 aa9.86□□□□□ -0.83
SNIP1-201ENST00000296215 MOGAT3Q86VF5 341 aa9.86□□□□□ -0.83
SNIP1-201ENST00000296215 ZNF683Q8IZ20 524 aa9.86□□□□□ -0.83
SNIP1-201ENST00000296215 PAXXQ9BUH6 204 aa9.86□□□□□ -0.83
SNIP1-201ENST00000296215 OTOFQ9HC10 1997 aa9.86□□□□□ -0.83
SNIP1-201ENST00000296215 C9JCJ5 164 aa9.86□□□□□ -0.83
SNIP1-201ENST00000296215 DLL1O00548 723 aa9.86□□□□□ -0.83
SNIP1-201ENST00000296215 NMSQ5H8A3 153 aa9.86□□□□□ -0.83
SNIP1-201ENST00000296215 ATP5L2Q7Z4Y8 100 aa9.86□□□□□ -0.83
SNIP1-201ENST00000296215 PPP1R32Q7Z5V6 425 aa9.86□□□□□ -0.83
SNIP1-201ENST00000296215 FGFRL1Q8N441 504 aa9.86□□□□□ -0.83
SNIP1-201ENST00000296215 NUP35Q8NFH5 326 aa9.86□□□□□ -0.83
SNIP1-201ENST00000296215 NRTNQ99748 197 aa9.86□□□□□ -0.83
SNIP1-201ENST00000296215 SCRT2Q9NQ03 307 aa9.86□□□□□ -0.83
SNIP1-201ENST00000296215 PTGDSP41222 190 aa9.86□□□□□ -0.83
SNIP1-201ENST00000296215 MEOX1P50221 254 aa9.86□□□□□ -0.83
SNIP1-201ENST00000296215 EGR4Q05215 589 aa9.86□□□□□ -0.83
SNIP1-201ENST00000296215 CXCL17Q6UXB2 119 aa9.86□□□□□ -0.83
SNIP1-201ENST00000296215 SRSF12Q8WXF0 261 aaKnown RBP9.86□□□□□ -0.83
SNIP1-201ENST00000296215 ATAD5Q96QE3 1844 aa9.86□□□□□ -0.83
SNIP1-201ENST00000296215 URB1O60287 2271 aaKnown RBP9.86□□□□□ -0.83
SNIP1-201ENST00000296215 RARRES3Q9UL19 164 aa9.86□□□□□ -0.83
SNIP1-201ENST00000296215 KIAA0100Q14667 2235 aaKnown RBP9.85□□□□□ -0.83
SNIP1-201ENST00000296215 H0YGG7 62 aa9.85□□□□□ -0.83
SNIP1-201ENST00000296215 FCGR3BO75015 233 aa9.85□□□□□ -0.83
SNIP1-201ENST00000296215 NDUFA3O95167 84 aa9.85□□□□□ -0.83
SNIP1-201ENST00000296215 TEN1Q86WV5 123 aa9.85□□□□□ -0.83
SNIP1-201ENST00000296215 NEU4Q8WWR8 484 aaPredicted RBP9.85□□□□□ -0.83
SNIP1-201ENST00000296215 R3HDMLQ9H3Y0 253 aa9.85□□□□□ -0.83
SNIP1-201ENST00000296215 C5P01031 1676 aa9.85□□□□□ -0.83
SNIP1-201ENST00000296215 A0A1B0GUT8 65 aa9.85□□□□□ -0.83
SNIP1-201ENST00000296215 IGLL5B9A064 214 aa9.85□□□□□ -0.83
SNIP1-201ENST00000296215 ZG16O60844 167 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms