RNA–Protein interactions for RNA: ENST00000294623.8

FUBP1-201, Transcript of far upstream element binding protein 1, humanhuman

TSL 1 (best)

Gene FUBP1, Length 2,201 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FUBP1-201ENST00000294623 DUTP33316 252 aaKnown RBP11.77□□□□□ -0.53
FUBP1-201ENST00000294623 MRPL32Q9BYC8 188 aaKnown RBP11.77□□□□□ -0.53
FUBP1-201ENST00000294623 DEPPQ9NTK1 212 aa11.77□□□□□ -0.53
FUBP1-201ENST00000294623 SERTAD4Q9NUC0 356 aa11.77□□□□□ -0.53
FUBP1-201ENST00000294623 GTF3C1Q12789 2109 aa11.77□□□□□ -0.53
FUBP1-201ENST00000294623 A0A1B0GXF2 115 aa11.76□□□□□ -0.53
FUBP1-201ENST00000294623 SPINK4O60575 86 aa11.76□□□□□ -0.53
FUBP1-201ENST00000294623 GFRA3O60609 400 aa11.76□□□□□ -0.53
FUBP1-201ENST00000294623 CELA3BP08861 270 aa11.76□□□□□ -0.53
FUBP1-201ENST00000294623 HIST1H1EP10412 219 aaKnown RBP11.76□□□□□ -0.53
FUBP1-201ENST00000294623 MFAP2P55001 183 aa11.76□□□□□ -0.53
FUBP1-201ENST00000294623 TCL1AP56279 114 aa11.76□□□□□ -0.53
FUBP1-201ENST00000294623 BRWD1-AS2P59051 145 aa11.76□□□□□ -0.53
FUBP1-201ENST00000294623 ERVK-16P61578 105 aa11.76□□□□□ -0.53
FUBP1-201ENST00000294623 NHLH1Q02575 133 aa11.76□□□□□ -0.53
FUBP1-201ENST00000294623 CFHR1Q03591 330 aa11.76□□□□□ -0.53
FUBP1-201ENST00000294623 FXYD3Q14802 87 aa11.76□□□□□ -0.53
FUBP1-201ENST00000294623 BPIFA4PQ86YQ2 179 aa11.76□□□□□ -0.53
FUBP1-201ENST00000294623 PLEKHA3Q9HB20 300 aa11.76□□□□□ -0.53
FUBP1-201ENST00000294623 PCDH15Q96QU1 1955 aa11.76□□□□□ -0.53
FUBP1-201ENST00000294623 LOC102723996A0A087X1L8 192 aa11.76□□□□□ -0.53
FUBP1-201ENST00000294623 PSG5Q15238 335 aa11.76□□□□□ -0.53
FUBP1-201ENST00000294623 TMEM97Q5BJF2 176 aa11.76□□□□□ -0.53
FUBP1-201ENST00000294623 SPATA12Q7Z6I5 190 aa11.76□□□□□ -0.53
FUBP1-201ENST00000294623 OR2T6Q8NHC8 308 aa11.76□□□□□ -0.53
FUBP1-201ENST00000294623 H1FXQ92522 213 aaKnown RBP11.76□□□□□ -0.53
FUBP1-201ENST00000294623 C5orf30Q96GV9 206 aa11.76□□□□□ -0.53
FUBP1-201ENST00000294623 CDX2Q99626 313 aaPredicted RBP11.76□□□□□ -0.53
FUBP1-201ENST00000294623 ZNF835Q9Y2P0 537 aa11.76□□□□□ -0.53
FUBP1-201ENST00000294623 CEP192Q8TEP8 1941 aa11.76□□□□□ -0.53
FUBP1-201ENST00000294623 NGFP01138 241 aa11.75□□□□□ -0.53
FUBP1-201ENST00000294623 P04436 131 aa11.75□□□□□ -0.53
FUBP1-201ENST00000294623 CD27P26842 260 aa11.75□□□□□ -0.53
FUBP1-201ENST00000294623 RIPPLY3P57055 190 aa11.75□□□□□ -0.53
FUBP1-201ENST00000294623 B3GALT5-AS1P59052 145 aa11.75□□□□□ -0.53
FUBP1-201ENST00000294623 OR1C1Q15619 314 aa11.75□□□□□ -0.53
FUBP1-201ENST00000294623 DEFB133Q30KQ1 61 aa11.75□□□□□ -0.53
FUBP1-201ENST00000294623 CT83Q5H943 113 aa11.75□□□□□ -0.53
FUBP1-201ENST00000294623 PRAMEF5Q5TYX0 476 aa11.75□□□□□ -0.53
FUBP1-201ENST00000294623 PRAMEF6Q5VXH4 476 aa11.75□□□□□ -0.53
FUBP1-201ENST00000294623 OR1N2Q8NGR9 330 aa11.75□□□□□ -0.53
FUBP1-201ENST00000294623 GUCD1Q96NT3 240 aa11.75□□□□□ -0.53
FUBP1-201ENST00000294623 SIVA1O15304 175 aa11.75□□□□□ -0.53
FUBP1-201ENST00000294623 MGST1P10620 155 aaKnown RBP11.75□□□□□ -0.53
FUBP1-201ENST00000294623 GDF1P27539 372 aa11.75□□□□□ -0.53
FUBP1-201ENST00000294623 HTR1DP28221 377 aa11.75□□□□□ -0.53
FUBP1-201ENST00000294623 SLC23A3Q6PIS1 610 aa11.75□□□□□ -0.53
FUBP1-201ENST00000294623 C5orf17Q8NAS9 161 aa11.75□□□□□ -0.53
FUBP1-201ENST00000294623 ZNF488Q96MN9 340 aa11.75□□□□□ -0.53
FUBP1-201ENST00000294623 DUSP13Q9UII6 198 aa11.75□□□□□ -0.53
FUBP1-201ENST00000294623 ARHGAP21Q5T5U3 1957 aa11.74□□□□□ -0.53
FUBP1-201ENST00000294623 IGKV3D-15A0A087WSY6 115 aa11.74□□□□□ -0.53
FUBP1-201ENST00000294623 C5orf49A4QMS7 147 aa11.74□□□□□ -0.53
FUBP1-201ENST00000294623 OR9G9P0C7N8 305 aa11.74□□□□□ -0.53
FUBP1-201ENST00000294623 CA6P23280 308 aa11.74□□□□□ -0.53
FUBP1-201ENST00000294623 LGALS7P47929 136 aa11.74□□□□□ -0.53
FUBP1-201ENST00000294623 SSR4P51571 173 aa11.74□□□□□ -0.53
FUBP1-201ENST00000294623 RPS16P62249 146 aaKnown RBP11.74□□□□□ -0.53
FUBP1-201ENST00000294623 TMEM240Q5SV17 173 aa11.74□□□□□ -0.53
FUBP1-201ENST00000294623 GGNQ86UU5 652 aa11.74□□□□□ -0.53
FUBP1-201ENST00000294623 NUP35Q8NFH5 326 aa11.74□□□□□ -0.53
FUBP1-201ENST00000294623 PROK2Q9HC23 129 aa11.74□□□□□ -0.53
FUBP1-201ENST00000294623 CRIM1Q9NZV1 1036 aa11.74□□□□□ -0.53
FUBP1-201ENST00000294623 ADH4P08319 380 aa11.74□□□□□ -0.53
FUBP1-201ENST00000294623 HBBP68871 147 aa11.74□□□□□ -0.53
FUBP1-201ENST00000294623 PLP2Q04941 152 aa11.74□□□□□ -0.53
FUBP1-201ENST00000294623 PSMG4Q5JS54 123 aa11.74□□□□□ -0.53
FUBP1-201ENST00000294623 LINC01545Q5VT33 79 aa11.74□□□□□ -0.53
FUBP1-201ENST00000294623 SPATA31B1PQ5VZV4 182 aa11.74□□□□□ -0.53
FUBP1-201ENST00000294623 ZNF808Q8N4W9 903 aaPredicted RBP11.74□□□□□ -0.53
FUBP1-201ENST00000294623 CLCF1Q9UBD9 225 aa11.74□□□□□ -0.53
FUBP1-201ENST00000294623 SEC16AO15027 2179 aa11.73□□□□□ -0.53
FUBP1-201ENST00000294623 IGHV1-24A0A0C4DH33 117 aa11.73□□□□□ -0.53
FUBP1-201ENST00000294623 C12orf77C9JDV5 145 aa11.73□□□□□ -0.53
FUBP1-201ENST00000294623 SAP30O75446 220 aa11.73□□□□□ -0.53
FUBP1-201ENST00000294623 OTX2P32243 289 aa11.73□□□□□ -0.53
FUBP1-201ENST00000294623 SLC35B1P78383 322 aa11.73□□□□□ -0.53
FUBP1-201ENST00000294623 WIPI1Q5MNZ9 446 aaPredicted RBP11.73□□□□□ -0.53
FUBP1-201ENST00000294623 SSMEM1Q8WWF3 244 aa11.73□□□□□ -0.53
FUBP1-201ENST00000294623 SARAFQ96BY9 339 aa11.73□□□□□ -0.53
FUBP1-201ENST00000294623 SSBP4Q9BWG4 385 aaPredicted RBP11.73□□□□□ -0.53
FUBP1-201ENST00000294623 WDR54Q9H977 334 aa11.73□□□□□ -0.53
FUBP1-201ENST00000294623 JKAMPQ9P055 326 aa11.73□□□□□ -0.53
FUBP1-201ENST00000294623 PSG11Q9UQ72 335 aa11.73□□□□□ -0.53
FUBP1-201ENST00000294623 MYO7AQ13402 2215 aa11.73□□□□□ -0.53
FUBP1-201ENST00000294623 PSMB11A5LHX3 300 aa11.72□□□□□ -0.53
FUBP1-201ENST00000294623 FAM231BA6NCW3 169 aa11.72□□□□□ -0.53
FUBP1-201ENST00000294623 M0R296 226 aa11.72□□□□□ -0.53
FUBP1-201ENST00000294623 CCL3P10147 92 aa11.72□□□□□ -0.53
FUBP1-201ENST00000294623 GATA2P23769 480 aaPredicted RBP11.72□□□□□ -0.53
FUBP1-201ENST00000294623 S100A7P31151 101 aa11.72□□□□□ -0.53
FUBP1-201ENST00000294623 RPL8P62917 257 aaKnown RBP11.72□□□□□ -0.53
FUBP1-201ENST00000294623 MRPL49Q13405 166 aaKnown RBP11.72□□□□□ -0.53
FUBP1-201ENST00000294623 GABRA6Q16445 453 aa11.72□□□□□ -0.53
FUBP1-201ENST00000294623 MIR17HGQ75NE6 70 aa11.72□□□□□ -0.53
FUBP1-201ENST00000294623 TMEM251Q8N6I4 163 aa11.72□□□□□ -0.53
FUBP1-201ENST00000294623 OR9G4Q8NGQ1 327 aa11.72□□□□□ -0.53
FUBP1-201ENST00000294623 OR2K2Q8NGT1 345 aa11.72□□□□□ -0.53
FUBP1-201ENST00000294623 C1orf159Q96HA4 380 aa11.72□□□□□ -0.53
FUBP1-201ENST00000294623 NDFIP1Q9BT67 221 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms