RNA–Protein interactions for RNA: ENST00000291552.8

U2AF1-201, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene U2AF1, Length 962 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-201ENST00000291552 FAM106AQ4KMX7 169 aa18.92■□□□□ 0.62
U2AF1-201ENST00000291552 TM4SF20Q53R12 229 aa18.92■□□□□ 0.62
U2AF1-201ENST00000291552 TMEM69Q5SWH9 247 aa18.92■□□□□ 0.62
U2AF1-201ENST00000291552 UXS1Q8NBZ7 420 aa18.92■□□□□ 0.62
U2AF1-201ENST00000291552 CD300LFQ8TDQ1 290 aa18.92■□□□□ 0.62
U2AF1-201ENST00000291552 PGLYRP1O75594 196 aaPredicted RBP18.91■□□□□ 0.62
U2AF1-201ENST00000291552 ZNF57Q68EA5 555 aaPredicted RBP18.91■□□□□ 0.62
U2AF1-201ENST00000291552 GDPD1Q8N9F7 314 aa18.91■□□□□ 0.62
U2AF1-201ENST00000291552 IGHV3-35A0A0C4DH35 117 aa18.9■□□□□ 0.62
U2AF1-201ENST00000291552 TEX50A0A1B0GTY4 177 aa18.9■□□□□ 0.62
U2AF1-201ENST00000291552 MARCH11A6NNE9 402 aa18.9■□□□□ 0.62
U2AF1-201ENST00000291552 F2RP25116 425 aa18.9■□□□□ 0.62
U2AF1-201ENST00000291552 MFAP2P55001 183 aa18.9■□□□□ 0.62
U2AF1-201ENST00000291552 ZNF585BQ52M93 769 aa18.9■□□□□ 0.62
U2AF1-201ENST00000291552 BTNL8Q6UX41 500 aa18.9■□□□□ 0.62
U2AF1-201ENST00000291552 BIRC6Q9NR09 4857 aa18.89■□□□□ 0.61
U2AF1-201ENST00000291552 EIF4EP06730 217 aaKnown RBP18.89■□□□□ 0.61
U2AF1-201ENST00000291552 C8orf88P0DMB2 117 aa18.89■□□□□ 0.61
U2AF1-201ENST00000291552 PTBP1P26599 531 aaKnown RBP eCLIP18.89■□□□□ 0.61
U2AF1-201ENST00000291552 LYSMD2Q8IV50 215 aa18.89■□□□□ 0.61
U2AF1-201ENST00000291552 OR5H2Q8NGV7 314 aa18.89■□□□□ 0.61
U2AF1-201ENST00000291552 FCAMRQ8WWV6 532 aa18.89■□□□□ 0.61
U2AF1-201ENST00000291552 ZNF436Q9C0F3 470 aaPredicted RBP18.89■□□□□ 0.61
U2AF1-201ENST00000291552 SCAF4O95104 1147 aaKnown RBP18.88■□□□□ 0.61
U2AF1-201ENST00000291552 SERPINE2P07093 398 aa18.88■□□□□ 0.61
U2AF1-201ENST00000291552 TRAPPC2P0DI81 140 aa18.88■□□□□ 0.61
U2AF1-201ENST00000291552 TRAPPC2BP0DI82 140 aa18.88■□□□□ 0.61
U2AF1-201ENST00000291552 OR13C7P0DN81 318 aa18.88■□□□□ 0.61
U2AF1-201ENST00000291552 LPAR6P43657 344 aa18.88■□□□□ 0.61
U2AF1-201ENST00000291552 TAS2R46P59540 309 aa18.88■□□□□ 0.61
U2AF1-201ENST00000291552 THOC7Q6I9Y2 204 aaKnown RBP18.88■□□□□ 0.61
U2AF1-201ENST00000291552 BORCS5Q969J3 196 aa18.88■□□□□ 0.61
U2AF1-201ENST00000291552 NDUFA4L2Q9NRX3 87 aa18.88■□□□□ 0.61
U2AF1-201ENST00000291552 NSG2Q9Y328 171 aa18.88■□□□□ 0.61
U2AF1-201ENST00000291552 PRSS3P35030 304 aa18.87■□□□□ 0.61
U2AF1-201ENST00000291552 HRH1P35367 487 aa18.87■□□□□ 0.61
U2AF1-201ENST00000291552 ERVK-16P61578 105 aa18.87■□□□□ 0.61
U2AF1-201ENST00000291552 SLC16A13Q7RTY0 426 aa18.87■□□□□ 0.61
U2AF1-201ENST00000291552 TSPAN14Q8NG11 270 aa18.87■□□□□ 0.61
U2AF1-201ENST00000291552 OR1L8Q8NGR8 309 aa18.87■□□□□ 0.61
U2AF1-201ENST00000291552 VN1R17PQ8TDU5 208 aa18.87■□□□□ 0.61
U2AF1-201ENST00000291552 SLC25A46Q96AG3 418 aa18.87■□□□□ 0.61
U2AF1-201ENST00000291552 DGCR14Q96DF8 476 aaKnown RBP18.87■□□□□ 0.61
U2AF1-201ENST00000291552 A0A087WXM4 84 aa18.86■□□□□ 0.61
U2AF1-201ENST00000291552 TGOLN2O43493 480 aa18.86■□□□□ 0.61
U2AF1-201ENST00000291552 G6PCP35575 357 aa18.86■□□□□ 0.61
U2AF1-201ENST00000291552 PLET1Q6UQ28 207 aa18.86■□□□□ 0.61
U2AF1-201ENST00000291552 CADM3Q8N126 398 aa18.86■□□□□ 0.61
U2AF1-201ENST00000291552 GPX8Q8TED1 209 aa18.86■□□□□ 0.61
U2AF1-201ENST00000291552 TMEM190Q8WZ59 177 aa18.86■□□□□ 0.61
U2AF1-201ENST00000291552 IGHV3-21A0A0B4J1V1 117 aa18.85■□□□□ 0.61
U2AF1-201ENST00000291552 DBX1A6NMT0 343 aa18.85■□□□□ 0.61
U2AF1-201ENST00000291552 F8W735 103 aaPredicted RBP18.85■□□□□ 0.61
U2AF1-201ENST00000291552 GPR31O00270 319 aa18.85■□□□□ 0.61
U2AF1-201ENST00000291552 KRASP01116 189 aa18.85■□□□□ 0.61
U2AF1-201ENST00000291552 HLA-DMAP28067 261 aa18.85■□□□□ 0.61
U2AF1-201ENST00000291552 NCS1P62166 190 aa18.85■□□□□ 0.61
U2AF1-201ENST00000291552 OR52B4Q8NGK2 314 aa18.85■□□□□ 0.61
U2AF1-201ENST00000291552 MARC2Q969Z3 335 aa18.85■□□□□ 0.61
U2AF1-201ENST00000291552 THYN1Q9P016 225 aa18.85■□□□□ 0.61
U2AF1-201ENST00000291552 F11RQ9Y624 299 aaKnown RBP18.85■□□□□ 0.61
U2AF1-201ENST00000291552 OR2T8A6NH00 312 aa18.84■□□□□ 0.61
U2AF1-201ENST00000291552 ELLP55199 621 aaPredicted RBP18.84■□□□□ 0.61
U2AF1-201ENST00000291552 PHLDA2Q53GA4 152 aa18.84■□□□□ 0.61
U2AF1-201ENST00000291552 LSM10Q969L4 123 aaKnown RBP18.84■□□□□ 0.61
U2AF1-201ENST00000291552 ZNF414Q96IQ9 312 aa18.84■□□□□ 0.61
U2AF1-201ENST00000291552 HINT2Q9BX68 163 aa18.84■□□□□ 0.61
U2AF1-201ENST00000291552 MRPL27Q9P0M9 148 aaKnown RBP18.84■□□□□ 0.61
U2AF1-201ENST00000291552 UFC1Q9Y3C8 167 aa18.84■□□□□ 0.61
U2AF1-201ENST00000291552 OR51B2Q9Y5P1 312 aa18.84■□□□□ 0.61
U2AF1-201ENST00000291552 K7EIM0 57 aa18.83■□□□□ 0.6
U2AF1-201ENST00000291552 TNFAIP8O95379 198 aa18.83■□□□□ 0.6
U2AF1-201ENST00000291552 SLC25A24Q6NUK1 477 aa18.83■□□□□ 0.6
U2AF1-201ENST00000291552 HSD17B13Q7Z5P4 300 aaPredicted RBP18.83■□□□□ 0.6
U2AF1-201ENST00000291552 CMTM1Q8IZ96 169 aa18.83■□□□□ 0.6
U2AF1-201ENST00000291552 OR6F1Q8NGZ6 308 aa18.83■□□□□ 0.6
U2AF1-201ENST00000291552 CHRDL1Q9BU40 450 aa18.83■□□□□ 0.6
U2AF1-201ENST00000291552 VCX3AQ9NNX9 186 aa18.83■□□□□ 0.6
U2AF1-201ENST00000291552 TRAV25A0A0B4J276 109 aa18.82■□□□□ 0.6
U2AF1-201ENST00000291552 FUNDC2Q9BWH2 189 aa18.82■□□□□ 0.6
U2AF1-201ENST00000291552 COMMD3Q9UBI1 195 aa18.82■□□□□ 0.6
U2AF1-201ENST00000291552 IGKV1-39P01597 117 aa18.81■□□□□ 0.6
U2AF1-201ENST00000291552 IGKV1D-39P04432 117 aa18.81■□□□□ 0.6
U2AF1-201ENST00000291552 ADMP35318 185 aa18.81■□□□□ 0.6
U2AF1-201ENST00000291552 SCARB1Q8WTV0 552 aa18.81■□□□□ 0.6
U2AF1-201ENST00000291552 BSCL2Q96G97 398 aaPredicted RBP18.81■□□□□ 0.6
U2AF1-201ENST00000291552 GGTLC1Q9BX51 225 aa18.81■□□□□ 0.6
U2AF1-201ENST00000291552 TMEM14BQ9NUH8 114 aa18.81■□□□□ 0.6
U2AF1-201ENST00000291552 C15orf61A6NNL5 157 aa18.8■□□□□ 0.6
U2AF1-201ENST00000291552 APOA1P02647 267 aa18.8■□□□□ 0.6
U2AF1-201ENST00000291552 VBP1P61758 197 aa18.8■□□□□ 0.6
U2AF1-201ENST00000291552 SNX29P2Q8IUI4 249 aa18.8■□□□□ 0.6
U2AF1-201ENST00000291552 OR1L6Q8NGR2 347 aa18.8■□□□□ 0.6
U2AF1-201ENST00000291552 C21orf62Q9NYP8 219 aa18.8■□□□□ 0.6
U2AF1-201ENST00000291552 IGHV3OR16-8A0A075B7F1 116 aa18.79■□□□□ 0.6
U2AF1-201ENST00000291552 CYB5BO43169 146 aa18.79■□□□□ 0.6
U2AF1-201ENST00000291552 SNAPC5O75971 98 aa18.79■□□□□ 0.6
U2AF1-201ENST00000291552 ELK1P19419 428 aa18.79■□□□□ 0.6
U2AF1-201ENST00000291552 ANKRD55Q3KP44 614 aa18.79■□□□□ 0.6
U2AF1-201ENST00000291552 RBPMS2Q6ZRY4 209 aaKnown RBP18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms