RNA–Protein interactions for RNA: ENST00000290037.10

SEC16A-202, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEC16A, Length 8,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-202ENST00000290037 SCTP09683 121 aa12.55□□□□□ -0.4
SEC16A-202ENST00000290037 FTH1P19P0C7X4 201 aa12.55□□□□□ -0.4
SEC16A-202ENST00000290037 MBD3L1Q8WWY6 194 aa12.55□□□□□ -0.4
SEC16A-202ENST00000290037 OPN3Q9H1Y3 402 aaPredicted RBP12.55□□□□□ -0.4
SEC16A-202ENST00000290037 PLP1P60201 277 aa12.54□□□□□ -0.4
SEC16A-202ENST00000290037 RHOGP84095 191 aa12.54□□□□□ -0.4
SEC16A-202ENST00000290037 IL4P05112 153 aa12.54□□□□□ -0.4
SEC16A-202ENST00000290037 ZNF250P15622 560 aa12.54□□□□□ -0.4
SEC16A-202ENST00000290037 DRAM1Q8N682 238 aa12.54□□□□□ -0.4
SEC16A-202ENST00000290037 IGHV1-69-2A0A0G2JMI3 117 aa12.54□□□□□ -0.4
SEC16A-202ENST00000290037 DPRXA6NFQ7 191 aa12.54□□□□□ -0.4
SEC16A-202ENST00000290037 C15orf61A6NNL5 157 aa12.54□□□□□ -0.4
SEC16A-202ENST00000290037 A0A0G2JK05 382 aa12.54□□□□□ -0.4
SEC16A-202ENST00000290037 OR4C46A6NHA9 309 aa12.54□□□□□ -0.4
SEC16A-202ENST00000290037 A1L4Q6 167 aa12.54□□□□□ -0.4
SEC16A-202ENST00000290037 CCL4P13236 92 aa12.54□□□□□ -0.4
SEC16A-202ENST00000290037 ZNF25P17030 456 aaPredicted RBP12.54□□□□□ -0.4
SEC16A-202ENST00000290037 TMEM101Q96IK0 257 aa12.54□□□□□ -0.4
SEC16A-202ENST00000290037 RPP21Q9H633 154 aaKnown RBP12.54□□□□□ -0.4
SEC16A-202ENST00000290037 TRBV24-1A0A075B6N3 115 aa12.54□□□□□ -0.4
SEC16A-202ENST00000290037 EFEMP2O95967 443 aa12.54□□□□□ -0.4
SEC16A-202ENST00000290037 ZNF497Q6ZNH5 498 aa12.54□□□□□ -0.4
SEC16A-202ENST00000290037 ZNF818PQ6ZRF7 136 aa12.54□□□□□ -0.4
SEC16A-202ENST00000290037 FOXL1Q12952 345 aa12.54□□□□□ -0.4
SEC16A-202ENST00000290037 MBNL2Q5VZF2 373 aaKnown RBP12.54□□□□□ -0.4
SEC16A-202ENST00000290037 SLC25A48Q6ZT89 311 aaKnown RBP12.54□□□□□ -0.4
SEC16A-202ENST00000290037 EGR4Q05215 589 aa12.53□□□□□ -0.4
SEC16A-202ENST00000290037 HIST1H4GQ99525 98 aa12.53□□□□□ -0.4
SEC16A-202ENST00000290037 RPP25Q9BUL9 199 aaKnown RBP12.53□□□□□ -0.4
SEC16A-202ENST00000290037 TLNRD1Q9H1K6 362 aa12.53□□□□□ -0.4
SEC16A-202ENST00000290037 COX6B1P14854 86 aa12.53□□□□□ -0.4
SEC16A-202ENST00000290037 CSRP1P21291 193 aaKnown RBP12.53□□□□□ -0.4
SEC16A-202ENST00000290037 RAXQ9Y2V3 346 aa12.53□□□□□ -0.4
SEC16A-202ENST00000290037 PEX7O00628 323 aa12.53□□□□□ -0.4
SEC16A-202ENST00000290037 ISOC2Q96AB3 205 aa12.53□□□□□ -0.4
SEC16A-202ENST00000290037 SDF2L1Q9HCN8 221 aa12.53□□□□□ -0.4
SEC16A-202ENST00000290037 SEMA5BQ9P283 1151 aa12.53□□□□□ -0.4
SEC16A-202ENST00000290037 NUDT10Q8NFP7 164 aa12.53□□□□□ -0.4
SEC16A-202ENST00000290037 OR9G4Q8NGQ1 327 aa12.53□□□□□ -0.4
SEC16A-202ENST00000290037 MEGF10Q96KG7 1140 aa12.53□□□□□ -0.4
SEC16A-202ENST00000290037 DUSP14O95147 198 aaKnown RBP12.53□□□□□ -0.4
SEC16A-202ENST00000290037 PEMTQ9UBM1 199 aa12.53□□□□□ -0.4
SEC16A-202ENST00000290037 C7orf71A4D174 169 aa12.52□□□□□ -0.4
SEC16A-202ENST00000290037 CENPWQ5EE01 88 aa12.52□□□□□ -0.4
SEC16A-202ENST00000290037 JKAMPQ9P055 326 aa12.52□□□□□ -0.4
SEC16A-202ENST00000290037 CX3CL1P78423 397 aa12.52□□□□□ -0.4
SEC16A-202ENST00000290037 CT83Q5H943 113 aa12.52□□□□□ -0.4
SEC16A-202ENST00000290037 LEPP41159 167 aa12.52□□□□□ -0.4
SEC16A-202ENST00000290037 FAM159AQ6UWV7 190 aa12.52□□□□□ -0.4
SEC16A-202ENST00000290037 ABHD12Q8N2K0 398 aa12.52□□□□□ -0.4
SEC16A-202ENST00000290037 MOSP00540 346 aa12.52□□□□□ -0.41
SEC16A-202ENST00000290037 NCMAPQ5T1S8 102 aa12.52□□□□□ -0.41
SEC16A-202ENST00000290037 ADIPOQQ15848 244 aa12.52□□□□□ -0.41
SEC16A-202ENST00000290037 GEMIN7Q9H840 131 aaKnown RBP12.52□□□□□ -0.41
SEC16A-202ENST00000290037 SIGLEC5O15389 551 aa12.52□□□□□ -0.41
SEC16A-202ENST00000290037 ALKBH6Q3KRA9 238 aa12.52□□□□□ -0.41
SEC16A-202ENST00000290037 SRSF5Q13243 272 aaKnown RBP12.51□□□□□ -0.41
SEC16A-202ENST00000290037 TMEM170AQ8WVE7 144 aa12.51□□□□□ -0.41
SEC16A-202ENST00000290037 GPR61Q9BZJ8 451 aa12.51□□□□□ -0.41
SEC16A-202ENST00000290037 MSL2Q9HCI7 577 aa12.51□□□□□ -0.41
SEC16A-202ENST00000290037 CCL2P13500 99 aa12.51□□□□□ -0.41
SEC16A-202ENST00000290037 SRSF2Q01130 221 aaKnown RBP12.51□□□□□ -0.41
SEC16A-202ENST00000290037 AUP1Q9Y679 476 aa12.51□□□□□ -0.41
SEC16A-202ENST00000290037 TNRC6AQ8NDV7 1962 aaKnown RBP12.51□□□□□ -0.41
SEC16A-202ENST00000290037 PPP1R32Q7Z5V6 425 aa12.51□□□□□ -0.41
SEC16A-202ENST00000290037 ADRA2AP08913 450 aa12.51□□□□□ -0.41
SEC16A-202ENST00000290037 POLEQ07864 2286 aa12.51□□□□□ -0.41
SEC16A-202ENST00000290037 RND2P52198 227 aa12.51□□□□□ -0.41
SEC16A-202ENST00000290037 ITLN1Q8WWA0 313 aa12.51□□□□□ -0.41
SEC16A-202ENST00000290037 FOXA2Q9Y261 457 aaPredicted RBP12.51□□□□□ -0.41
SEC16A-202ENST00000290037 MINOS1Q5TGZ0 78 aa12.51□□□□□ -0.41
SEC16A-202ENST00000290037 MINOS1-NBL1R4GNA1 71 aa12.51□□□□□ -0.41
SEC16A-202ENST00000290037 GTF3C1Q12789 2109 aa12.51□□□□□ -0.41
SEC16A-202ENST00000290037 PGPA6NDG6 321 aa12.5□□□□□ -0.41
SEC16A-202ENST00000290037 NBEAP1P0C6P0 100 aa12.5□□□□□ -0.41
SEC16A-202ENST00000290037 ZNF880Q6PDB4 577 aa12.5□□□□□ -0.41
SEC16A-202ENST00000290037 SPSB3Q6PJ21 355 aa12.5□□□□□ -0.41
SEC16A-202ENST00000290037 EP300Q09472 2414 aaPredicted RBP12.5□□□□□ -0.41
SEC16A-202ENST00000290037 ERVH48-1M5A8F1 160 aa12.5□□□□□ -0.41
SEC16A-202ENST00000290037 SRP19P09132 144 aaKnown RBP12.5□□□□□ -0.41
SEC16A-202ENST00000290037 LYL1P12980 280 aa12.5□□□□□ -0.41
SEC16A-202ENST00000290037 UNC119Q13432 240 aa12.5□□□□□ -0.41
SEC16A-202ENST00000290037 PDE6HQ13956 83 aa12.5□□□□□ -0.41
SEC16A-202ENST00000290037 ECSCRQ19T08 205 aa12.5□□□□□ -0.41
SEC16A-202ENST00000290037 UBE2CO00762 179 aa12.5□□□□□ -0.41
SEC16A-202ENST00000290037 SDHCQ99643 169 aaPredicted RBP12.5□□□□□ -0.41
SEC16A-202ENST00000290037 DTX2Q86UW9 622 aa12.5□□□□□ -0.41
SEC16A-202ENST00000290037 MS4A3Q96HJ5 214 aa12.5□□□□□ -0.41
SEC16A-202ENST00000290037 HINT1P49773 126 aaPredicted RBP12.5□□□□□ -0.41
SEC16A-202ENST00000290037 MRPL14Q6P1L8 145 aaKnown RBP12.5□□□□□ -0.41
SEC16A-202ENST00000290037 FAM231BA6NCW3 169 aa12.5□□□□□ -0.41
SEC16A-202ENST00000290037 MGPP08493 103 aa12.49□□□□□ -0.41
SEC16A-202ENST00000290037 CD40P25942 277 aa12.49□□□□□ -0.41
SEC16A-202ENST00000290037 SNAI3Q3KNW1 292 aa12.49□□□□□ -0.41
SEC16A-202ENST00000290037 ZNF407Q9C0G0 2248 aa12.49□□□□□ -0.41
SEC16A-202ENST00000290037 MIC13Q5XKP0 118 aa12.49□□□□□ -0.41
SEC16A-202ENST00000290037 ZNF600Q6ZNG1 722 aa12.49□□□□□ -0.41
SEC16A-202ENST00000290037 GFRA4Q9GZZ7 299 aa12.49□□□□□ -0.41
SEC16A-202ENST00000290037 SRIP30626 198 aa12.49□□□□□ -0.41
SEC16A-202ENST00000290037 PDCD1Q15116 288 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms