RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.91□□□□□ -1.3
PTPDC1-201ENST00000288976 ZBTB34Q8NCN2 500 aa6.91□□□□□ -1.3
PTPDC1-201ENST00000288976 CCL28Q9NRJ3 127 aa6.91□□□□□ -1.3
PTPDC1-201ENST00000288976 TRAV40A0A0B4J280 105 aa6.91□□□□□ -1.3
PTPDC1-201ENST00000288976 XKRY2A2RUG3 117 aa6.91□□□□□ -1.3
PTPDC1-201ENST00000288976 ZNF727A8MUV8 499 aa6.91□□□□□ -1.3
PTPDC1-201ENST00000288976 SCTP09683 121 aa6.91□□□□□ -1.3
PTPDC1-201ENST00000288976 RAB5AP20339 215 aa6.91□□□□□ -1.3
PTPDC1-201ENST00000288976 CD1BP29016 333 aa6.91□□□□□ -1.3
PTPDC1-201ENST00000288976 RND3P61587 244 aa6.91□□□□□ -1.3
PTPDC1-201ENST00000288976 RELBQ01201 579 aa6.91□□□□□ -1.3
PTPDC1-201ENST00000288976 ACOT6Q3I5F7 207 aaPredicted RBP6.91□□□□□ -1.3
PTPDC1-201ENST00000288976 CXorf66Q5JRM2 361 aaPredicted RBP6.91□□□□□ -1.3
PTPDC1-201ENST00000288976 OR4X2Q8NGF9 303 aa6.91□□□□□ -1.3
PTPDC1-201ENST00000288976 OR52B4Q8NGK2 314 aa6.91□□□□□ -1.3
PTPDC1-201ENST00000288976 OR4C13Q8NGP0 309 aa6.91□□□□□ -1.3
PTPDC1-201ENST00000288976 OR2W1Q9Y3N9 320 aa6.91□□□□□ -1.3
PTPDC1-201ENST00000288976 TRAV20A0A0B4J274 112 aa6.9□□□□□ -1.3
PTPDC1-201ENST00000288976 REG1AP05451 166 aa6.9□□□□□ -1.3
PTPDC1-201ENST00000288976 FGF2P09038 288 aa6.9□□□□□ -1.3
PTPDC1-201ENST00000288976 ALX4Q9H161 411 aaPredicted RBP6.9□□□□□ -1.3
PTPDC1-201ENST00000288976 DSCAML1Q8TD84 2053 aa6.9□□□□□ -1.3
PTPDC1-201ENST00000288976 RNF223E7ERA6 249 aa6.9□□□□□ -1.3
PTPDC1-201ENST00000288976 RPL12P30050 165 aaKnown RBP6.9□□□□□ -1.3
PTPDC1-201ENST00000288976 IGSF11Q5DX21 431 aa6.9□□□□□ -1.3
PTPDC1-201ENST00000288976 EBLN2Q6P2I7 272 aa6.9□□□□□ -1.3
PTPDC1-201ENST00000288976 C12orf54Q6X4T0 127 aa6.9□□□□□ -1.3
PTPDC1-201ENST00000288976 MRGPRFQ96AM1 343 aa6.9□□□□□ -1.3
PTPDC1-201ENST00000288976 CYYR1Q96J86 154 aa6.9□□□□□ -1.3
PTPDC1-201ENST00000288976 ACTR3CQ9C0K3 210 aaPredicted RBP6.9□□□□□ -1.3
PTPDC1-201ENST00000288976 UQCC1Q9NVA1 299 aa6.9□□□□□ -1.3
PTPDC1-201ENST00000288976 IGHV4-61A0A0C4DH41 118 aa6.9□□□□□ -1.31
PTPDC1-201ENST00000288976 J3QLI3 93 aa6.9□□□□□ -1.31
PTPDC1-201ENST00000288976 SSTR5P35346 364 aa6.9□□□□□ -1.31
PTPDC1-201ENST00000288976 ZNF90Q03938 601 aa6.9□□□□□ -1.31
PTPDC1-201ENST00000288976 OR1L1Q8NH94 360 aa6.9□□□□□ -1.31
PTPDC1-201ENST00000288976 RXFP4Q8TDU9 374 aa6.9□□□□□ -1.31
PTPDC1-201ENST00000288976 CXorf58Q96LI9 332 aa6.9□□□□□ -1.31
PTPDC1-201ENST00000288976 IGHV3-66A0A0C4DH42 116 aa6.9□□□□□ -1.31
PTPDC1-201ENST00000288976 LOC102723971A0A1B0GUV8 181 aa6.9□□□□□ -1.31
PTPDC1-201ENST00000288976 J3QR06 171 aa6.9□□□□□ -1.31
PTPDC1-201ENST00000288976 CTSDP07339 412 aaPredicted RBP6.9□□□□□ -1.31
PTPDC1-201ENST00000288976 CNN1P51911 297 aaKnown RBP6.9□□□□□ -1.31
PTPDC1-201ENST00000288976 MARVELD1Q9BSK0 173 aa6.9□□□□□ -1.31
PTPDC1-201ENST00000288976 H7BYZ3 331 aa6.89□□□□□ -1.31
PTPDC1-201ENST00000288976 PPYP01298 95 aa6.89□□□□□ -1.31
PTPDC1-201ENST00000288976 IGHV3-23P01764 117 aa6.89□□□□□ -1.31
PTPDC1-201ENST00000288976 IGHV1-8P0DP01 117 aa6.89□□□□□ -1.31
PTPDC1-201ENST00000288976 SRD5A1P18405 259 aa6.89□□□□□ -1.31
PTPDC1-201ENST00000288976 UBE2L3P68036 154 aaKnown RBP6.89□□□□□ -1.31
PTPDC1-201ENST00000288976 FAM106AQ4KMX7 169 aa6.89□□□□□ -1.31
PTPDC1-201ENST00000288976 NCR3LG1Q68D85 454 aa6.89□□□□□ -1.31
PTPDC1-201ENST00000288976 LAMTOR1Q6IAA8 161 aa6.89□□□□□ -1.31
PTPDC1-201ENST00000288976 CLEC9AQ6UXN8 241 aa6.89□□□□□ -1.31
PTPDC1-201ENST00000288976 LINC01356Q8N9X3 169 aa6.89□□□□□ -1.31
PTPDC1-201ENST00000288976 BEND2Q8NDZ0 799 aa6.89□□□□□ -1.31
PTPDC1-201ENST00000288976 IL22RA2Q969J5 263 aa6.89□□□□□ -1.31
PTPDC1-201ENST00000288976 PFDN5Q99471 154 aa6.89□□□□□ -1.31
PTPDC1-201ENST00000288976 TMEM231Q9H6L2 316 aa6.89□□□□□ -1.31
PTPDC1-201ENST00000288976 LEUTXA8MZ59 168 aa6.89□□□□□ -1.31
PTPDC1-201ENST00000288976 B4DSR2 109 aa6.89□□□□□ -1.31
PTPDC1-201ENST00000288976 C22orf46C9J442 243 aa6.89□□□□□ -1.31
PTPDC1-201ENST00000288976 MGPP08493 103 aa6.89□□□□□ -1.31
PTPDC1-201ENST00000288976 CAMPP49913 170 aa6.89□□□□□ -1.31
PTPDC1-201ENST00000288976 POLR2GP62487 172 aaKnown RBP eCLIP6.89□□□□□ -1.31
PTPDC1-201ENST00000288976 MORN2Q502X0 79 aa6.89□□□□□ -1.31
PTPDC1-201ENST00000288976 FAM78BQ5VT40 261 aa6.89□□□□□ -1.31
PTPDC1-201ENST00000288976 BRD3OSQ6XYD6 125 aa6.89□□□□□ -1.31
PTPDC1-201ENST00000288976 ZNF645Q8N7E2 425 aa6.89□□□□□ -1.31
PTPDC1-201ENST00000288976 BVESQ8NE79 360 aa6.89□□□□□ -1.31
PTPDC1-201ENST00000288976 ADTRPQ96IZ2 230 aa6.89□□□□□ -1.31
PTPDC1-201ENST00000288976 PIPOXQ9P0Z9 390 aa6.89□□□□□ -1.31
PTPDC1-201ENST00000288976 WASHC3Q9Y3C0 194 aa6.89□□□□□ -1.31
PTPDC1-201ENST00000288976 A0A0B4J293 547 aa6.89□□□□□ -1.31
PTPDC1-201ENST00000288976 C1orf196B1AJZ1 125 aa6.89□□□□□ -1.31
PTPDC1-201ENST00000288976 H3BTX0 84 aa6.89□□□□□ -1.31
PTPDC1-201ENST00000288976 TRGV3P03979 118 aa6.89□□□□□ -1.31
PTPDC1-201ENST00000288976 RAB5BP61020 215 aa6.89□□□□□ -1.31
PTPDC1-201ENST00000288976 RPL30P62888 115 aaKnown RBP6.89□□□□□ -1.31
PTPDC1-201ENST00000288976 DHODHQ02127 395 aa6.89□□□□□ -1.31
PTPDC1-201ENST00000288976 ETFRF1Q6IPR1 90 aa6.89□□□□□ -1.31
PTPDC1-201ENST00000288976 OR1L8Q8NGR8 309 aa6.89□□□□□ -1.31
PTPDC1-201ENST00000288976 OR4A5Q8NH83 315 aa6.89□□□□□ -1.31
PTPDC1-201ENST00000288976 SIRPDQ9H106 197 aa6.89□□□□□ -1.31
PTPDC1-201ENST00000288976 GPR132Q9UNW8 380 aa6.89□□□□□ -1.31
PTPDC1-201ENST00000288976 CSN3P07498 182 aa6.88□□□□□ -1.31
PTPDC1-201ENST00000288976 OR5AC1P0C628 307 aa6.88□□□□□ -1.31
PTPDC1-201ENST00000288976 NQO2P16083 231 aa6.88□□□□□ -1.31
PTPDC1-201ENST00000288976 ZFP36P26651 326 aaKnown RBP6.88□□□□□ -1.31
PTPDC1-201ENST00000288976 G0S2P27469 103 aa6.88□□□□□ -1.31
PTPDC1-201ENST00000288976 PSMB6P28072 239 aa6.88□□□□□ -1.31
PTPDC1-201ENST00000288976 HIST2H2BCQ6DN03 193 aa6.88□□□□□ -1.31
PTPDC1-201ENST00000288976 SLC25A48Q6ZT89 311 aaKnown RBP6.88□□□□□ -1.31
PTPDC1-201ENST00000288976 FGFRL1Q8N441 504 aa6.88□□□□□ -1.31
PTPDC1-201ENST00000288976 C16orf92Q96LL3 132 aa6.88□□□□□ -1.31
PTPDC1-201ENST00000288976 JMJD8Q96S16 334 aa6.88□□□□□ -1.31
PTPDC1-201ENST00000288976 REG4Q9BYZ8 158 aa6.88□□□□□ -1.31
PTPDC1-201ENST00000288976 TMEM133Q9H2Q1 129 aa6.88□□□□□ -1.31
PTPDC1-201ENST00000288976 RAB18Q9NP72 206 aa6.88□□□□□ -1.31
PTPDC1-201ENST00000288976 FKBP11Q9NYL4 201 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms