RNA–Protein interactions for RNA: ENST00000286349.3

TRIM42-201, Transcript of tripartite motif containing 42, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM42, Length 2,539 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42-201ENST00000286349 ERASQ7Z444 233 aa6.32□□□□□ -1.4
TRIM42-201ENST00000286349 WDR86Q86TI4 376 aa6.32□□□□□ -1.4
TRIM42-201ENST00000286349 TBC1D26Q86UD7 250 aa6.32□□□□□ -1.4
TRIM42-201ENST00000286349 OR5D13Q8NGL4 314 aa6.32□□□□□ -1.4
TRIM42-201ENST00000286349 SECTM1Q8WVN6 248 aa6.32□□□□□ -1.4
TRIM42-201ENST00000286349 RDH5Q92781 318 aa6.32□□□□□ -1.4
TRIM42-201ENST00000286349 ZNF488Q96MN9 340 aa6.32□□□□□ -1.4
TRIM42-201ENST00000286349 HS3ST6Q96QI5 342 aa6.32□□□□□ -1.4
TRIM42-201ENST00000286349 MAP1LC3CQ9BXW4 147 aa6.32□□□□□ -1.4
TRIM42-201ENST00000286349 TAAR3PQ9P1P4 343 aa6.32□□□□□ -1.4
TRIM42-201ENST00000286349 TRAPPC2LQ9UL33 140 aa6.32□□□□□ -1.4
TRIM42-201ENST00000286349 WIPI2Q9Y4P8 454 aa6.32□□□□□ -1.4
TRIM42-201ENST00000286349 PRR14LQ5THK1 2151 aa6.32□□□□□ -1.4
TRIM42-201ENST00000286349 IGHV1-69-2A0A0G2JMI3 117 aa6.31□□□□□ -1.4
TRIM42-201ENST00000286349 SMIM9A6NGZ8 99 aa6.31□□□□□ -1.4
TRIM42-201ENST00000286349 HAND1O96004 215 aa6.31□□□□□ -1.4
TRIM42-201ENST00000286349 LMO1P25800 156 aa6.31□□□□□ -1.4
TRIM42-201ENST00000286349 ELOBQ15370 118 aa6.31□□□□□ -1.4
TRIM42-201ENST00000286349 SP6Q3SY56 376 aa6.31□□□□□ -1.4
TRIM42-201ENST00000286349 GFRALQ6UXV0 394 aa6.31□□□□□ -1.4
TRIM42-201ENST00000286349 SSX8Q7RTT4 187 aa6.31□□□□□ -1.4
TRIM42-201ENST00000286349 NEGR1Q7Z3B1 354 aa6.31□□□□□ -1.4
TRIM42-201ENST00000286349 P2RX4Q99571 388 aa6.31□□□□□ -1.4
TRIM42-201ENST00000286349 CYTL1Q9NRR1 136 aa6.31□□□□□ -1.4
TRIM42-201ENST00000286349 KCNIP1Q9NZI2 227 aa6.31□□□□□ -1.4
TRIM42-201ENST00000286349 UQCR10Q9UDW1 63 aa6.31□□□□□ -1.4
TRIM42-201ENST00000286349 MRPS16Q9Y3D3 137 aaKnown RBP6.31□□□□□ -1.4
TRIM42-201ENST00000286349 SLC25A15Q9Y619 301 aa6.31□□□□□ -1.4
TRIM42-201ENST00000286349 IGHV1-18A0A0C4DH31 117 aa6.31□□□□□ -1.4
TRIM42-201ENST00000286349 H7BYZ3 331 aa6.31□□□□□ -1.4
TRIM42-201ENST00000286349 IFNL4K9M1U5 179 aa6.31□□□□□ -1.4
TRIM42-201ENST00000286349 GPR137BO60478 399 aa6.31□□□□□ -1.4
TRIM42-201ENST00000286349 AGFG2O95081 481 aa6.31□□□□□ -1.4
TRIM42-201ENST00000286349 IFNA1P01562 189 aa6.31□□□□□ -1.4
TRIM42-201ENST00000286349 GRPP07492 148 aa6.31□□□□□ -1.4
TRIM42-201ENST00000286349 MMP9P14780 707 aa6.31□□□□□ -1.4
TRIM42-201ENST00000286349 VDAC1P21796 283 aa6.31□□□□□ -1.4
TRIM42-201ENST00000286349 MPV17P39210 176 aa6.31□□□□□ -1.4
TRIM42-201ENST00000286349 PAX9P55771 341 aa6.31□□□□□ -1.4
TRIM42-201ENST00000286349 CD300EQ496F6 205 aaPredicted RBP6.31□□□□□ -1.4
TRIM42-201ENST00000286349 LRRC10Q5BKY1 277 aa6.31□□□□□ -1.4
TRIM42-201ENST00000286349 RNASEKQ6P5S7 137 aaKnown RBP6.31□□□□□ -1.4
TRIM42-201ENST00000286349 ZNF818PQ6ZRF7 136 aa6.31□□□□□ -1.4
TRIM42-201ENST00000286349 LYZL2Q7Z4W2 148 aa6.31□□□□□ -1.4
TRIM42-201ENST00000286349 FAM57AQ8TBR7 257 aa6.31□□□□□ -1.4
TRIM42-201ENST00000286349 TBX15Q96SF7 602 aa6.31□□□□□ -1.4
TRIM42-201ENST00000286349 MBNL3Q9NUK0 354 aaKnown RBP6.31□□□□□ -1.4
TRIM42-201ENST00000286349 LSM5Q9Y4Y9 91 aaKnown RBP6.31□□□□□ -1.4
TRIM42-201ENST00000286349 FAM215AQ9Y5M1 114 aa6.31□□□□□ -1.4
TRIM42-201ENST00000286349 BORCS7-ASMTA0A0B4J1R7 106 aa6.3□□□□□ -1.4
TRIM42-201ENST00000286349 TMEM30CPA0ZSE6 113 aa6.3□□□□□ -1.4
TRIM42-201ENST00000286349 SIRPB1O00241 398 aa6.3□□□□□ -1.4
TRIM42-201ENST00000286349 CRYGBP07316 175 aa6.3□□□□□ -1.4
TRIM42-201ENST00000286349 SLC25A6P12236 298 aa6.3□□□□□ -1.4
TRIM42-201ENST00000286349 TLE1Q04724 770 aa6.3□□□□□ -1.4
TRIM42-201ENST00000286349 HSD52Q0P140 79 aa6.3□□□□□ -1.4
TRIM42-201ENST00000286349 SLC35E4Q6ICL7 350 aa6.3□□□□□ -1.4
TRIM42-201ENST00000286349 FAM90A1Q86YD7 464 aa6.3□□□□□ -1.4
TRIM42-201ENST00000286349 MED12LQ86YW9 2145 aa6.3□□□□□ -1.4
TRIM42-201ENST00000286349 PNKDQ8N490 385 aa6.3□□□□□ -1.4
TRIM42-201ENST00000286349 OR10V1Q8NGI7 309 aa6.3□□□□□ -1.4
TRIM42-201ENST00000286349 ZNF418Q8TF45 676 aaPredicted RBP6.3□□□□□ -1.4
TRIM42-201ENST00000286349 SPATA25Q9BR10 227 aa6.3□□□□□ -1.4
TRIM42-201ENST00000286349 TAF9BQ9HBM6 251 aa6.3□□□□□ -1.4
TRIM42-201ENST00000286349 IGKV1-6A0A0C4DH72 117 aa6.3□□□□□ -1.4
TRIM42-201ENST00000286349 MSGN1A6NI15 193 aa6.3□□□□□ -1.4
TRIM42-201ENST00000286349 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.3□□□□□ -1.4
TRIM42-201ENST00000286349 MLNRO43193 412 aa6.3□□□□□ -1.4
TRIM42-201ENST00000286349 AMTP48728 403 aa6.3□□□□□ -1.4
TRIM42-201ENST00000286349 MSMO1Q15800 293 aa6.3□□□□□ -1.4
TRIM42-201ENST00000286349 TOMM20LQ6UXN7 152 aa6.3□□□□□ -1.4
TRIM42-201ENST00000286349 C20orf204Q6ZNR8 217 aa6.3□□□□□ -1.4
TRIM42-201ENST00000286349 Q8WTZ3 238 aa6.3□□□□□ -1.4
TRIM42-201ENST00000286349 RCHY1Q96PM5 261 aa6.3□□□□□ -1.4
TRIM42-201ENST00000286349 PATZ1Q9HBE1 687 aaKnown RBP6.3□□□□□ -1.4
TRIM42-201ENST00000286349 SHANK1Q9Y566 2161 aa6.3□□□□□ -1.4
TRIM42-201ENST00000286349 ZNF705FA8MVS1 300 aaPredicted RBP6.29□□□□□ -1.4
TRIM42-201ENST00000286349 PGLYRP1O75594 196 aaPredicted RBP6.29□□□□□ -1.4
TRIM42-201ENST00000286349 HBZP02008 142 aa6.29□□□□□ -1.4
TRIM42-201ENST00000286349 CRYAAP02489 173 aa6.29□□□□□ -1.4
TRIM42-201ENST00000286349 ZNF705DP0CH99 300 aaPredicted RBP6.29□□□□□ -1.4
TRIM42-201ENST00000286349 ZNF705BP0CI00 300 aaPredicted RBP6.29□□□□□ -1.4
TRIM42-201ENST00000286349 LPAR6P43657 344 aa6.29□□□□□ -1.4
TRIM42-201ENST00000286349 NKX2-1P43699 371 aaPredicted RBP6.29□□□□□ -1.4
TRIM42-201ENST00000286349 UQCRFS1P47985 274 aa6.29□□□□□ -1.4
TRIM42-201ENST00000286349 ACP7Q6ZNF0 438 aa6.29□□□□□ -1.4
TRIM42-201ENST00000286349 GTF2H5Q6ZYL4 71 aa6.29□□□□□ -1.4
TRIM42-201ENST00000286349 FA2HQ7L5A8 372 aa6.29□□□□□ -1.4
TRIM42-201ENST00000286349 OR4B1Q8NGF8 309 aa6.29□□□□□ -1.4
TRIM42-201ENST00000286349 OR9G4Q8NGQ1 327 aa6.29□□□□□ -1.4
TRIM42-201ENST00000286349 OR1B1Q8NGR6 318 aa6.29□□□□□ -1.4
TRIM42-201ENST00000286349 SNX22Q96L94 193 aa6.29□□□□□ -1.4
TRIM42-201ENST00000286349 C20orf24Q9BUV8 137 aa6.29□□□□□ -1.4
TRIM42-201ENST00000286349 VAMP8Q9BV40 100 aa6.29□□□□□ -1.4
TRIM42-201ENST00000286349 CTDSP1Q9GZU7 261 aa6.29□□□□□ -1.4
TRIM42-201ENST00000286349 CCL28Q9NRJ3 127 aa6.29□□□□□ -1.4
TRIM42-201ENST00000286349 LIN7CQ9NUP9 197 aaKnown RBP6.29□□□□□ -1.4
TRIM42-201ENST00000286349 TRAV38-1A0A0B4J264 116 aa6.29□□□□□ -1.4
TRIM42-201ENST00000286349 IGKV1D-13A0A0B4J2D9 117 aa6.29□□□□□ -1.4
TRIM42-201ENST00000286349 A0A1B0GUS0 222 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms