RNA–Protein interactions for RNA: ENST00000277549.9

CACNA1B-201, Transcript of calcium voltage-gated channel subunit alpha1 B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1B, Length 7,158 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1B-201ENST00000277549 M0QZK8 103 aa17.16■□□□□ 0.34
CACNA1B-201ENST00000277549 P2RY4P51582 365 aa17.16■□□□□ 0.34
CACNA1B-201ENST00000277549 SHANK3Q9BYB0 1731 aa17.16■□□□□ 0.34
CACNA1B-201ENST00000277549 CBLN1P23435 193 aa17.16■□□□□ 0.34
CACNA1B-201ENST00000277549 C12orf54Q6X4T0 127 aa17.16■□□□□ 0.34
CACNA1B-201ENST00000277549 CBLN4Q9NTU7 201 aa17.16■□□□□ 0.34
CACNA1B-201ENST00000277549 FAM206AQ9NX38 181 aa17.16■□□□□ 0.34
CACNA1B-201ENST00000277549 SP7Q8TDD2 431 aaPredicted RBP17.15■□□□□ 0.34
CACNA1B-201ENST00000277549 IMMP2LQ96T52 175 aa17.15■□□□□ 0.34
CACNA1B-201ENST00000277549 NRIP2Q9BQI9 281 aa17.15■□□□□ 0.34
CACNA1B-201ENST00000277549 TRAV2A0A0B4J234 112 aa17.15■□□□□ 0.34
CACNA1B-201ENST00000277549 SLC25A34Q6PIV7 304 aa17.15■□□□□ 0.34
CACNA1B-201ENST00000277549 PTGDSP41222 190 aa17.15■□□□□ 0.34
CACNA1B-201ENST00000277549 MEF2BQ02080 365 aaPredicted RBP17.15■□□□□ 0.34
CACNA1B-201ENST00000277549 TRAV14DV4A0A0A6YYC5 116 aa17.15■□□□□ 0.34
CACNA1B-201ENST00000277549 SERF2P84101 59 aa17.15■□□□□ 0.34
CACNA1B-201ENST00000277549 LBHQ53QV2 105 aaPredicted RBP17.15■□□□□ 0.34
CACNA1B-201ENST00000277549 OR11H12B2RN74 326 aa17.14■□□□□ 0.33
CACNA1B-201ENST00000277549 AGAP20933 346 aa17.14■□□□□ 0.33
CACNA1B-201ENST00000277549 OR11H1Q8NG94 326 aa17.14■□□□□ 0.33
CACNA1B-201ENST00000277549 OR11H2Q8NH07 326 aa17.14■□□□□ 0.33
CACNA1B-201ENST00000277549 CXCL2P19875 107 aa17.14■□□□□ 0.33
CACNA1B-201ENST00000277549 SCO2A0A1W2PP80 73 aa17.14■□□□□ 0.33
CACNA1B-201ENST00000277549 TMEM50AO95807 157 aa17.14■□□□□ 0.33
CACNA1B-201ENST00000277549 MEF2CQ06413 473 aaPredicted RBP17.14■□□□□ 0.33
CACNA1B-201ENST00000277549 LINC00299Q6ZSB3 139 aa17.14■□□□□ 0.33
CACNA1B-201ENST00000277549 TMEM54Q969K7 222 aa17.14■□□□□ 0.33
CACNA1B-201ENST00000277549 CD28P10747 220 aa17.14■□□□□ 0.33
CACNA1B-201ENST00000277549 PAPPA-AS1Q5QFB9 102 aa17.14■□□□□ 0.33
CACNA1B-201ENST00000277549 PAX2Q02962 417 aa17.13■□□□□ 0.33
CACNA1B-201ENST00000277549 C17orf98A8MV24 154 aa17.13■□□□□ 0.33
CACNA1B-201ENST00000277549 CACNA1CQ13936 2221 aa17.13■□□□□ 0.33
CACNA1B-201ENST00000277549 TMEM250H0YL14 139 aa17.13■□□□□ 0.33
CACNA1B-201ENST00000277549 CKS1BP61024 79 aa17.13■□□□□ 0.33
CACNA1B-201ENST00000277549 CYB5R2Q6BCY4 276 aa17.13■□□□□ 0.33
CACNA1B-201ENST00000277549 Q9H3A6 140 aa17.13■□□□□ 0.33
CACNA1B-201ENST00000277549 FAM169BQ8N8A8 192 aa17.13■□□□□ 0.33
CACNA1B-201ENST00000277549 HLA-DQA1P01909 254 aa17.12■□□□□ 0.33
CACNA1B-201ENST00000277549 RHOGP84095 191 aa17.12■□□□□ 0.33
CACNA1B-201ENST00000277549 ADAMTSL1Q8N6G6 1762 aa17.12■□□□□ 0.33
CACNA1B-201ENST00000277549 NBEAP1P0C6P0 100 aa17.12■□□□□ 0.33
CACNA1B-201ENST00000277549 CGB7P0DN87 165 aa17.12■□□□□ 0.33
CACNA1B-201ENST00000277549 GATA4P43694 442 aa17.12■□□□□ 0.33
CACNA1B-201ENST00000277549 ZXDCQ2QGD7 858 aaPredicted RBP17.12■□□□□ 0.33
CACNA1B-201ENST00000277549 FAM110DQ8TAY7 271 aaPredicted RBP17.12■□□□□ 0.33
CACNA1B-201ENST00000277549 PMCHL2Q9BQD1 86 aa17.12■□□□□ 0.33
CACNA1B-201ENST00000277549 INS-IGF2F8WCM5 200 aa17.12■□□□□ 0.33
CACNA1B-201ENST00000277549 INSP01308 110 aa17.12■□□□□ 0.33
CACNA1B-201ENST00000277549 CFHR3Q02985 330 aa17.12■□□□□ 0.33
CACNA1B-201ENST00000277549 RNASE6Q93091 150 aaKnown RBP17.12■□□□□ 0.33
CACNA1B-201ENST00000277549 C14orf144Q96I85 54 aa17.12■□□□□ 0.33
CACNA1B-201ENST00000277549 GPR132Q9UNW8 380 aa17.12■□□□□ 0.33
CACNA1B-201ENST00000277549 MIR17HGQ75NE6 70 aa17.12■□□□□ 0.33
CACNA1B-201ENST00000277549 GATD1Q8NB37 220 aa17.12■□□□□ 0.33
CACNA1B-201ENST00000277549 PRSS23O95084 383 aa17.12■□□□□ 0.33
CACNA1B-201ENST00000277549 EGR4Q05215 589 aa17.12■□□□□ 0.33
CACNA1B-201ENST00000277549 VCX2Q9H322 139 aa17.12■□□□□ 0.33
CACNA1B-201ENST00000277549 LILRA1O75019 489 aa17.11■□□□□ 0.33
CACNA1B-201ENST00000277549 UMODP07911 640 aa17.11■□□□□ 0.33
CACNA1B-201ENST00000277549 VMO1Q7Z5L0 202 aa17.11■□□□□ 0.33
CACNA1B-201ENST00000277549 TGFBR3LH3BV60 316 aa17.11■□□□□ 0.33
CACNA1B-201ENST00000277549 SAPCD1Q5SSQ6 148 aa17.11■□□□□ 0.33
CACNA1B-201ENST00000277549 ASPHD2Q6ICH7 369 aa17.11■□□□□ 0.33
CACNA1B-201ENST00000277549 IFI27L2Q9H2X8 130 aa17.11■□□□□ 0.33
CACNA1B-201ENST00000277549 DTX2Q86UW9 622 aa17.11■□□□□ 0.33
CACNA1B-201ENST00000277549 IGLV1-36A0A0B4J1U3 117 aa17.11■□□□□ 0.33
CACNA1B-201ENST00000277549 RAG2P55895 527 aa17.11■□□□□ 0.33
CACNA1B-201ENST00000277549 ACTL10Q5JWF8 245 aa17.11■□□□□ 0.33
CACNA1B-201ENST00000277549 SCN1AP35498 2009 aa17.1■□□□□ 0.33
CACNA1B-201ENST00000277549 LINC00614P0C842 121 aa17.1■□□□□ 0.33
CACNA1B-201ENST00000277549 FER1L6-AS1Q8NA97 138 aa17.1■□□□□ 0.33
CACNA1B-201ENST00000277549 AQP3Q92482 292 aa17.1■□□□□ 0.33
CACNA1B-201ENST00000277549 GLRXP35754 106 aa17.1■□□□□ 0.33
CACNA1B-201ENST00000277549 C8orf82Q6P1X6 216 aaPredicted RBP17.1■□□□□ 0.33
CACNA1B-201ENST00000277549 ST20Q9HBF5 79 aa17.1■□□□□ 0.33
CACNA1B-201ENST00000277549 A0A087WX48 190 aa17.1■□□□□ 0.33
CACNA1B-201ENST00000277549 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP17.1■□□□□ 0.33
CACNA1B-201ENST00000277549 NDPQ00604 133 aa17.1■□□□□ 0.33
CACNA1B-201ENST00000277549 MRPL32Q9BYC8 188 aaKnown RBP17.1■□□□□ 0.33
CACNA1B-201ENST00000277549 HBDP02042 147 aa17.1■□□□□ 0.33
CACNA1B-201ENST00000277549 SCN2AQ99250 2005 aa17.1■□□□□ 0.33
CACNA1B-201ENST00000277549 FUT5Q11128 374 aa17.09■□□□□ 0.33
CACNA1B-201ENST00000277549 PKD1L3Q7Z443 1732 aa17.09■□□□□ 0.33
CACNA1B-201ENST00000277549 TRIP12Q14669 1992 aaPredicted RBP17.09■□□□□ 0.33
CACNA1B-201ENST00000277549 TRGV1A0A0A0MS02 117 aa17.09■□□□□ 0.33
CACNA1B-201ENST00000277549 PMCHL1Q16048 86 aa17.09■□□□□ 0.33
CACNA1B-201ENST00000277549 DOCK5Q9H7D0 1870 aa17.09■□□□□ 0.33
CACNA1B-201ENST00000277549 RP1L1Q8IWN7 2480 aaPredicted RBP17.09■□□□□ 0.33
CACNA1B-201ENST00000277549 MYO16Q9Y6X6 1858 aa17.09■□□□□ 0.33
CACNA1B-201ENST00000277549 NBR2O15453 112 aa17.09■□□□□ 0.33
CACNA1B-201ENST00000277549 LCNL1Q6ZST4 164 aa17.09■□□□□ 0.33
CACNA1B-201ENST00000277549 OR52E5Q8NH55 327 aa17.09■□□□□ 0.33
CACNA1B-201ENST00000277549 AICDAQ9GZX7 198 aa17.09■□□□□ 0.33
CACNA1B-201ENST00000277549 EDA2RQ9HAV5 297 aa17.09■□□□□ 0.33
CACNA1B-201ENST00000277549 C12orf77C9JDV5 145 aa17.09■□□□□ 0.33
CACNA1B-201ENST00000277549 SAMD13Q5VXD3 122 aa17.09■□□□□ 0.33
CACNA1B-201ENST00000277549 TBR1Q16650 682 aa17.09■□□□□ 0.33
CACNA1B-201ENST00000277549 C17orf100A8MU93 164 aa17.08■□□□□ 0.33
CACNA1B-201ENST00000277549 PLAC1Q9HBJ0 212 aa17.08■□□□□ 0.33
CACNA1B-201ENST00000277549 LHBP01229 141 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms