RNA–Protein interactions for RNA: ENST00000274254.9

SKP2-201, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 1 (best) BASIC

Gene SKP2, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-201ENST00000274254 ID3Q02535 119 aa13.54□□□□□ -0.24
SKP2-201ENST00000274254 ASPHD1Q5U4P2 390 aa13.54□□□□□ -0.24
SKP2-201ENST00000274254 ABHD5Q8WTS1 349 aa13.54□□□□□ -0.24
SKP2-201ENST00000274254 NOL4LQ96MY1 436 aaPredicted RBP13.54□□□□□ -0.24
SKP2-201ENST00000274254 FYTTD1Q96QD9 318 aaKnown RBP13.54□□□□□ -0.24
SKP2-201ENST00000274254 GSKIPQ9P0R6 139 aa13.54□□□□□ -0.24
SKP2-201ENST00000274254 IGLC7A0M8Q6 106 aa13.53□□□□□ -0.24
SKP2-201ENST00000274254 HMX3A6NHT5 357 aa13.53□□□□□ -0.24
SKP2-201ENST00000274254 VDAC2P45880 294 aaPredicted RBP13.53□□□□□ -0.24
SKP2-201ENST00000274254 SRSF4Q08170 494 aaKnown RBP13.53□□□□□ -0.24
SKP2-201ENST00000274254 AKIRIN2Q53H80 203 aa13.53□□□□□ -0.24
SKP2-201ENST00000274254 STPG2Q8N412 459 aa13.53□□□□□ -0.24
SKP2-201ENST00000274254 LFNGQ8NES3 379 aa13.53□□□□□ -0.24
SKP2-201ENST00000274254 OR10W1Q8NGF6 305 aa13.53□□□□□ -0.24
SKP2-201ENST00000274254 OR4F5Q8NH21 305 aa13.53□□□□□ -0.24
SKP2-201ENST00000274254 LINC01006Q8NI28 216 aa13.53□□□□□ -0.24
SKP2-201ENST00000274254 LINC00527Q9UJ94 153 aa13.53□□□□□ -0.24
SKP2-201ENST00000274254 A0A1B0GVG6 124 aa13.52□□□□□ -0.25
SKP2-201ENST00000274254 INS-IGF2F8WCM5 200 aa13.52□□□□□ -0.25
SKP2-201ENST00000274254 G3V318 75 aa13.52□□□□□ -0.25
SKP2-201ENST00000274254 NKX2-1P43699 371 aaPredicted RBP13.52□□□□□ -0.25
SKP2-201ENST00000274254 SPINK9Q5DT21 86 aa13.52□□□□□ -0.25
SKP2-201ENST00000274254 ARSJQ5FYB0 599 aaPredicted RBP13.52□□□□□ -0.25
SKP2-201ENST00000274254 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.52□□□□□ -0.25
SKP2-201ENST00000274254 TMEM68Q96MH6 324 aa13.52□□□□□ -0.25
SKP2-201ENST00000274254 HINT2Q9BX68 163 aa13.52□□□□□ -0.25
SKP2-201ENST00000274254 NMES1Q9C002 83 aa13.52□□□□□ -0.25
SKP2-201ENST00000274254 WSB1Q9Y6I7 421 aa13.52□□□□□ -0.25
SKP2-201ENST00000274254 TRAV41A0A0B4J266 112 aa13.51□□□□□ -0.25
SKP2-201ENST00000274254 A0A1W2PN81 502 aa13.51□□□□□ -0.25
SKP2-201ENST00000274254 APELAP0DMC3 54 aa13.51□□□□□ -0.25
SKP2-201ENST00000274254 AREGP15514 252 aa13.51□□□□□ -0.25
SKP2-201ENST00000274254 CHRNA7P36544 502 aa13.51□□□□□ -0.25
SKP2-201ENST00000274254 CYCSP99999 105 aaKnown RBP13.51□□□□□ -0.25
SKP2-201ENST00000274254 CFHR3Q02985 330 aa13.51□□□□□ -0.25
SKP2-201ENST00000274254 WT1-ASQ06250 92 aa13.51□□□□□ -0.25
SKP2-201ENST00000274254 TMEM267Q0VDI3 215 aaPredicted RBP13.51□□□□□ -0.25
SKP2-201ENST00000274254 ECSCRQ19T08 205 aa13.51□□□□□ -0.25
SKP2-201ENST00000274254 UNQ5815/PRO19632Q6UWF5 114 aa13.51□□□□□ -0.25
SKP2-201ENST00000274254 HSD17B13Q7Z5P4 300 aaPredicted RBP13.51□□□□□ -0.25
SKP2-201ENST00000274254 WNT10AQ9GZT5 417 aa13.51□□□□□ -0.25
SKP2-201ENST00000274254 PLEKHA3Q9HB20 300 aa13.51□□□□□ -0.25
SKP2-201ENST00000274254 MBPP02686 304 aaPredicted RBP13.5□□□□□ -0.25
SKP2-201ENST00000274254 PPIFP30405 207 aaKnown RBP13.5□□□□□ -0.25
SKP2-201ENST00000274254 WDR89Q96FK6 387 aaPredicted RBP13.5□□□□□ -0.25
SKP2-201ENST00000274254 RBKSQ9H477 322 aa13.5□□□□□ -0.25
SKP2-201ENST00000274254 hCG_2014768A0A024R1R8 64 aa13.49□□□□□ -0.25
SKP2-201ENST00000274254 SYNGR2O43760 224 aa13.49□□□□□ -0.25
SKP2-201ENST00000274254 MED6O75586 246 aa13.49□□□□□ -0.25
SKP2-201ENST00000274254 KRTAP24-1Q3LI83 254 aa13.49□□□□□ -0.25
SKP2-201ENST00000274254 TTC9CQ8N5M4 171 aa13.49□□□□□ -0.25
SKP2-201ENST00000274254 GON7Q9BXV9 100 aa13.49□□□□□ -0.25
SKP2-201ENST00000274254 ZNF436Q9C0F3 470 aaPredicted RBP13.49□□□□□ -0.25
SKP2-201ENST00000274254 MAGT1Q9H0U3 335 aa13.49□□□□□ -0.25
SKP2-201ENST00000274254 CLPSL1A2RUU4 121 aa13.49□□□□□ -0.25
SKP2-201ENST00000274254 NPIPB5A8MRT5 1133 aa13.49□□□□□ -0.25
SKP2-201ENST00000274254 CEBPZOSA8MTT3 80 aa13.49□□□□□ -0.25
SKP2-201ENST00000274254 SOX15O60248 233 aa13.49□□□□□ -0.25
SKP2-201ENST00000274254 SCGB1D2O95969 90 aa13.49□□□□□ -0.25
SKP2-201ENST00000274254 CRYGCP07315 174 aa13.49□□□□□ -0.25
SKP2-201ENST00000274254 OR13C7P0DN81 318 aa13.49□□□□□ -0.25
SKP2-201ENST00000274254 CTRB1P17538 263 aa13.49□□□□□ -0.25
SKP2-201ENST00000274254 MDKP21741 143 aaPredicted RBP13.49□□□□□ -0.25
SKP2-201ENST00000274254 PSMB6P28072 239 aa13.49□□□□□ -0.25
SKP2-201ENST00000274254 HOXA1P49639 335 aaPredicted RBP13.49□□□□□ -0.25
SKP2-201ENST00000274254 POLR2GP62487 172 aaKnown RBP eCLIP13.49□□□□□ -0.25
SKP2-201ENST00000274254 CTRB2Q6GPI1 263 aa13.49□□□□□ -0.25
SKP2-201ENST00000274254 MRPL41Q8IXM3 137 aaKnown RBP13.49□□□□□ -0.25
SKP2-201ENST00000274254 OR2C3Q8N628 320 aa13.49□□□□□ -0.25
SKP2-201ENST00000274254 DTD1Q8TEA8 209 aa13.49□□□□□ -0.25
SKP2-201ENST00000274254 WIPF2Q8TF74 440 aaPredicted RBP13.49□□□□□ -0.25
SKP2-201ENST00000274254 CHAC2Q8WUX2 184 aa13.49□□□□□ -0.25
SKP2-201ENST00000274254 ASB13Q8WXK3 278 aa13.49□□□□□ -0.25
SKP2-201ENST00000274254 RCL1Q9Y2P8 373 aaKnown RBP13.49□□□□□ -0.25
SKP2-201ENST00000274254 K7EPK0 472 aa13.48□□□□□ -0.25
SKP2-201ENST00000274254 GIPP09681 153 aaPredicted RBP13.48□□□□□ -0.25
SKP2-201ENST00000274254 RAB32Q13637 225 aa13.48□□□□□ -0.25
SKP2-201ENST00000274254 C11orf87Q6NUJ2 197 aa13.48□□□□□ -0.25
SKP2-201ENST00000274254 FAM110DQ8TAY7 271 aaPredicted RBP13.48□□□□□ -0.25
SKP2-201ENST00000274254 PPP1R1CQ8WVI7 109 aa13.48□□□□□ -0.25
SKP2-201ENST00000274254 ENY2Q9NPA8 101 aa13.48□□□□□ -0.25
SKP2-201ENST00000274254 A0A1B0GUS0 222 aa13.47□□□□□ -0.25
SKP2-201ENST00000274254 TMEM89A2RUT3 159 aa13.47□□□□□ -0.25
SKP2-201ENST00000274254 PSMB11A5LHX3 300 aa13.47□□□□□ -0.25
SKP2-201ENST00000274254 FBXO24O75426 580 aa13.47□□□□□ -0.25
SKP2-201ENST00000274254 REG1AP05451 166 aa13.47□□□□□ -0.25
SKP2-201ENST00000274254 PROK1P58294 105 aa13.47□□□□□ -0.25
SKP2-201ENST00000274254 ERHP84090 104 aaKnown RBP13.47□□□□□ -0.25
SKP2-201ENST00000274254 BSXQ3C1V8 233 aa13.47□□□□□ -0.25
SKP2-201ENST00000274254 ZNF329Q86UD4 541 aa13.47□□□□□ -0.25
SKP2-201ENST00000274254 ZNF114Q8NC26 417 aa13.47□□□□□ -0.25
SKP2-201ENST00000274254 OR5T1Q8NG75 326 aa13.47□□□□□ -0.25
SKP2-201ENST00000274254 ZFP57Q9NU63 452 aa13.47□□□□□ -0.25
SKP2-201ENST00000274254 RNF114Q9Y508 228 aa13.47□□□□□ -0.25
SKP2-201ENST00000274254 WRBO00258 174 aa13.46□□□□□ -0.25
SKP2-201ENST00000274254 BRI3O95415 125 aa13.46□□□□□ -0.25
SKP2-201ENST00000274254 IGLV1-40P01703 118 aa13.46□□□□□ -0.25
SKP2-201ENST00000274254 IGHG4P01861 327 aa13.46□□□□□ -0.25
SKP2-201ENST00000274254 BCAP31P51572 246 aa13.46□□□□□ -0.25
SKP2-201ENST00000274254 FOXL1Q12952 345 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms