RNA–Protein interactions for RNA: ENST00000273179.9

CTDSPL-201, Transcript of CTD small phosphatase like, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CTDSPL, Length 4,459 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-201ENST00000273179 KCNS1Q96KK3 526 aa7.48□□□□□ -1.21
CTDSPL-201ENST00000273179 MCHR1Q99705 422 aa7.48□□□□□ -1.21
CTDSPL-201ENST00000273179 TET1Q8NFU7 2136 aa7.48□□□□□ -1.21
CTDSPL-201ENST00000273179 CPSF4LA6NMK7 179 aaKnown RBP7.47□□□□□ -1.21
CTDSPL-201ENST00000273179 PRRG2O14669 202 aa7.47□□□□□ -1.21
CTDSPL-201ENST00000273179 CXCL13O43927 109 aa7.47□□□□□ -1.21
CTDSPL-201ENST00000273179 CD8AP01732 235 aa7.47□□□□□ -1.21
CTDSPL-201ENST00000273179 MST1LQ2TV78 715 aa7.47□□□□□ -1.21
CTDSPL-201ENST00000273179 SLC35E4Q6ICL7 350 aa7.47□□□□□ -1.21
CTDSPL-201ENST00000273179 Q6ZVL8 140 aa7.47□□□□□ -1.21
CTDSPL-201ENST00000273179 STPG3Q8N7X2 389 aa7.47□□□□□ -1.21
CTDSPL-201ENST00000273179 Q8TCH9 128 aa7.47□□□□□ -1.21
CTDSPL-201ENST00000273179 MRPL18Q9H0U6 180 aaKnown RBP7.47□□□□□ -1.21
CTDSPL-201ENST00000273179 PLEKHA3Q9HB20 300 aa7.47□□□□□ -1.21
CTDSPL-201ENST00000273179 FBXL7Q9UJT9 491 aa7.47□□□□□ -1.21
CTDSPL-201ENST00000273179 CELA3BP08861 270 aa7.47□□□□□ -1.21
CTDSPL-201ENST00000273179 SRP19P09132 144 aaKnown RBP7.47□□□□□ -1.21
CTDSPL-201ENST00000273179 C3orf79P0CE67 100 aa7.47□□□□□ -1.21
CTDSPL-201ENST00000273179 C2orf68Q2NKX9 166 aa7.47□□□□□ -1.21
CTDSPL-201ENST00000273179 LINC01620Q4KN68 170 aa7.47□□□□□ -1.21
CTDSPL-201ENST00000273179 LY6G5CQ5SRR4 150 aa7.47□□□□□ -1.21
CTDSPL-201ENST00000273179 TSACCQ96A04 125 aaPredicted RBP7.47□□□□□ -1.21
CTDSPL-201ENST00000273179 ADOQ96SZ5 270 aa7.47□□□□□ -1.21
CTDSPL-201ENST00000273179 BUB3O43684 328 aa7.47□□□□□ -1.21
CTDSPL-201ENST00000273179 SPANXDQ9BXN6 97 aa7.47□□□□□ -1.21
CTDSPL-201ENST00000273179 GOLGA4Q13439 2230 aaKnown RBP7.47□□□□□ -1.21
CTDSPL-201ENST00000273179 VCYO14598 125 aa7.46□□□□□ -1.21
CTDSPL-201ENST00000273179 SPINT2O43291 252 aa7.46□□□□□ -1.21
CTDSPL-201ENST00000273179 MYOD1P15172 320 aa7.46□□□□□ -1.21
CTDSPL-201ENST00000273179 P2RX1P51575 399 aa7.46□□□□□ -1.21
CTDSPL-201ENST00000273179 ECSCRQ19T08 205 aa7.46□□□□□ -1.21
CTDSPL-201ENST00000273179 APCDD1LQ8NCL9 501 aa7.46□□□□□ -1.21
CTDSPL-201ENST00000273179 CCDC140Q96MF4 163 aa7.46□□□□□ -1.21
CTDSPL-201ENST00000273179 KIR2DL4Q99706 377 aa7.46□□□□□ -1.21
CTDSPL-201ENST00000273179 SH3BGRL3Q9H299 93 aa7.46□□□□□ -1.21
CTDSPL-201ENST00000273179 RPUSD1Q9UJJ7 312 aaKnown RBP7.46□□□□□ -1.21
CTDSPL-201ENST00000273179 KCNE3Q9Y6H6 103 aa7.46□□□□□ -1.21
CTDSPL-201ENST00000273179 F8VVB4 439 aa7.46□□□□□ -1.21
CTDSPL-201ENST00000273179 F8VWA3 439 aa7.46□□□□□ -1.21
CTDSPL-201ENST00000273179 FOXI1Q12951 378 aa7.46□□□□□ -1.21
CTDSPL-201ENST00000273179 OR1C1Q15619 314 aa7.46□□□□□ -1.21
CTDSPL-201ENST00000273179 RSPO2Q6UXX9 243 aaPredicted RBP7.46□□□□□ -1.21
CTDSPL-201ENST00000273179 APRG1Q8IVJ8 170 aa7.46□□□□□ -1.21
CTDSPL-201ENST00000273179 PDCD1LG2Q9BQ51 273 aa7.46□□□□□ -1.21
CTDSPL-201ENST00000273179 PDFQ9HBH1 243 aa7.46□□□□□ -1.21
CTDSPL-201ENST00000273179 VSIG4Q9Y279 399 aa7.46□□□□□ -1.21
CTDSPL-201ENST00000273179 PIKFYVEQ9Y2I7 2098 aa7.46□□□□□ -1.21
CTDSPL-201ENST00000273179 HLA-DRB1P01911 266 aa7.46□□□□□ -1.22
CTDSPL-201ENST00000273179 RND2P52198 227 aa7.46□□□□□ -1.22
CTDSPL-201ENST00000273179 KLRB1Q12918 225 aa7.46□□□□□ -1.22
CTDSPL-201ENST00000273179 SLC25A47Q6Q0C1 308 aa7.46□□□□□ -1.22
CTDSPL-201ENST00000273179 GABARAPL3Q9BY60 117 aa7.46□□□□□ -1.22
CTDSPL-201ENST00000273179 KNCNA6PVL3 124 aa7.46□□□□□ -1.22
CTDSPL-201ENST00000273179 CNTFRP26992 372 aa7.46□□□□□ -1.22
CTDSPL-201ENST00000273179 TRPT1Q86TN4 253 aaKnown RBP7.46□□□□□ -1.22
CTDSPL-201ENST00000273179 LRTM2Q8N967 370 aa7.46□□□□□ -1.22
CTDSPL-201ENST00000273179 OR10G8Q8NGN5 311 aa7.46□□□□□ -1.22
CTDSPL-201ENST00000273179 TRBV4-1A0A0J9YWV2 114 aa7.45□□□□□ -1.22
CTDSPL-201ENST00000273179 OOSP1A8MZH6 123 aa7.45□□□□□ -1.22
CTDSPL-201ENST00000273179 CR2P20023 1033 aa7.45□□□□□ -1.22
CTDSPL-201ENST00000273179 CD70P32970 193 aa7.45□□□□□ -1.22
CTDSPL-201ENST00000273179 NHP2Q9NX24 153 aaKnown RBP7.45□□□□□ -1.22
CTDSPL-201ENST00000273179 C21orf62Q9NYP8 219 aa7.45□□□□□ -1.22
CTDSPL-201ENST00000273179 NSG1A0A0A6YYJ2 146 aa7.45□□□□□ -1.22
CTDSPL-201ENST00000273179 FXYD1O00168 92 aa7.45□□□□□ -1.22
CTDSPL-201ENST00000273179 CRXO43186 299 aaPredicted RBP7.45□□□□□ -1.22
CTDSPL-201ENST00000273179 EMDP50402 254 aa7.45□□□□□ -1.22
CTDSPL-201ENST00000273179 PRDX1Q06830 199 aaKnown RBP7.45□□□□□ -1.22
CTDSPL-201ENST00000273179 FOXE3Q13461 319 aa7.45□□□□□ -1.22
CTDSPL-201ENST00000273179 SMIM14Q96QK8 99 aa7.45□□□□□ -1.22
CTDSPL-201ENST00000273179 OR10A2Q9H208 303 aa7.45□□□□□ -1.22
CTDSPL-201ENST00000273179 NXT2Q9NPJ8 142 aaKnown RBP7.45□□□□□ -1.22
CTDSPL-201ENST00000273179 SCN10AQ9Y5Y9 1956 aa7.45□□□□□ -1.22
CTDSPL-201ENST00000273179 ATG2BQ96BY7 2078 aa7.45□□□□□ -1.22
CTDSPL-201ENST00000273179 H3BMG7 143 aa7.45□□□□□ -1.22
CTDSPL-201ENST00000273179 UQCRQO14949 82 aa7.45□□□□□ -1.22
CTDSPL-201ENST00000273179 CRLF1O75462 422 aa7.45□□□□□ -1.22
CTDSPL-201ENST00000273179 IGLL1P15814 213 aa7.45□□□□□ -1.22
CTDSPL-201ENST00000273179 TMEM86BQ8N661 226 aa7.45□□□□□ -1.22
CTDSPL-201ENST00000273179 C2orf50Q96LR7 162 aa7.45□□□□□ -1.22
CTDSPL-201ENST00000273179 OR2A5Q96R48 311 aa7.45□□□□□ -1.22
CTDSPL-201ENST00000273179 PSMB2P49721 201 aa7.44□□□□□ -1.22
CTDSPL-201ENST00000273179 FBXW4P57775 412 aa7.44□□□□□ -1.22
CTDSPL-201ENST00000273179 PCBD1P61457 104 aa7.44□□□□□ -1.22
CTDSPL-201ENST00000273179 RPS28P62857 69 aaKnown RBP7.44□□□□□ -1.22
CTDSPL-201ENST00000273179 ZNF260Q3ZCT1 412 aa7.44□□□□□ -1.22
CTDSPL-201ENST00000273179 TMEM207Q6UWW9 146 aa7.44□□□□□ -1.22
CTDSPL-201ENST00000273179 ZNF689Q96CS4 500 aaPredicted RBP7.44□□□□□ -1.22
CTDSPL-201ENST00000273179 GPX7Q96SL4 187 aaPredicted RBP7.44□□□□□ -1.22
CTDSPL-201ENST00000273179 MGST2Q99735 147 aa7.44□□□□□ -1.22
CTDSPL-201ENST00000273179 TMEM222Q9H0R3 208 aa7.44□□□□□ -1.22
CTDSPL-201ENST00000273179 C3orf85A0A1B0GTC6 90 aa7.44□□□□□ -1.22
CTDSPL-201ENST00000273179 SHISA9B4DS77 424 aa7.44□□□□□ -1.22
CTDSPL-201ENST00000273179 KBTBD11O94819 623 aa7.44□□□□□ -1.22
CTDSPL-201ENST00000273179 CFHR1Q03591 330 aa7.44□□□□□ -1.22
CTDSPL-201ENST00000273179 Q6ZT83 130 aa7.44□□□□□ -1.22
CTDSPL-201ENST00000273179 FAM19A2Q8N3H0 131 aa7.44□□□□□ -1.22
CTDSPL-201ENST00000273179 C15orf53Q8NAA6 179 aa7.44□□□□□ -1.22
CTDSPL-201ENST00000273179 COMMD5Q9GZQ3 224 aa7.44□□□□□ -1.22
CTDSPL-201ENST00000273179 TRPM7Q96QT4 1865 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms