RNA–Protein interactions for RNA: ENST00000272793.9

UBR3-201, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UBR3, Length 8,005 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-201ENST00000272793 RPRMQ9NS64 109 aa13.55□□□□□ -0.24
UBR3-201ENST00000272793 TGIF1Q15583 401 aa13.55□□□□□ -0.24
UBR3-201ENST00000272793 A0A0B4J2E0 115 aa13.55□□□□□ -0.24
UBR3-201ENST00000272793 A0A1B0GX12 115 aa13.55□□□□□ -0.24
UBR3-201ENST00000272793 LEPROTO15243 131 aa13.55□□□□□ -0.24
UBR3-201ENST00000272793 POU2AF1Q16633 256 aa13.55□□□□□ -0.24
UBR3-201ENST00000272793 MPTX1A8MV57 137 aa13.54□□□□□ -0.24
UBR3-201ENST00000272793 LEAP2Q969E1 77 aa13.54□□□□□ -0.24
UBR3-201ENST00000272793 V9GYH0 126 aa13.54□□□□□ -0.24
UBR3-201ENST00000272793 MMD2Q8IY49 270 aa13.54□□□□□ -0.24
UBR3-201ENST00000272793 IL11P20809 199 aa13.54□□□□□ -0.24
UBR3-201ENST00000272793 C10orf35Q96D05 121 aa13.54□□□□□ -0.24
UBR3-201ENST00000272793 RPL36A-HNRNPH2H7BZ11 118 aa13.54□□□□□ -0.24
UBR3-201ENST00000272793 CLPSP04118 112 aa13.54□□□□□ -0.24
UBR3-201ENST00000272793 NDUFAF3Q9BU61 184 aa13.54□□□□□ -0.24
UBR3-201ENST00000272793 MDS2Q8NDY4 140 aa13.54□□□□□ -0.24
UBR3-201ENST00000272793 NALCNQ8IZF0 1738 aa13.54□□□□□ -0.24
UBR3-201ENST00000272793 TRAV9-2A0A087WT02 112 aa13.54□□□□□ -0.24
UBR3-201ENST00000272793 ALKAL1Q6UXT8 129 aa13.54□□□□□ -0.24
UBR3-201ENST00000272793 HIGD1CA8MV81 97 aa13.53□□□□□ -0.24
UBR3-201ENST00000272793 RPP21Q9H633 154 aaKnown RBP13.53□□□□□ -0.24
UBR3-201ENST00000272793 DRD3P35462 400 aa13.53□□□□□ -0.24
UBR3-201ENST00000272793 A0A087WX48 190 aa13.53□□□□□ -0.24
UBR3-201ENST00000272793 PNLIPP16233 465 aa13.53□□□□□ -0.24
UBR3-201ENST00000272793 CXCL2P19875 107 aa13.53□□□□□ -0.24
UBR3-201ENST00000272793 CCL1P22362 96 aa13.53□□□□□ -0.24
UBR3-201ENST00000272793 INO80CQ6PI98 192 aaPredicted RBP13.53□□□□□ -0.24
UBR3-201ENST00000272793 TMEM91Q6ZNR0 172 aa13.53□□□□□ -0.24
UBR3-201ENST00000272793 FER1L6-AS1Q8NA97 138 aa13.53□□□□□ -0.24
UBR3-201ENST00000272793 IMMP2LQ96T52 175 aa13.53□□□□□ -0.24
UBR3-201ENST00000272793 CGB7P0DN87 165 aa13.53□□□□□ -0.24
UBR3-201ENST00000272793 ATP5J2P56134 94 aa13.53□□□□□ -0.24
UBR3-201ENST00000272793 TDHQ8IZJ6 230 aa13.53□□□□□ -0.24
UBR3-201ENST00000272793 ZFP64Q9NPA5 681 aa13.53□□□□□ -0.24
UBR3-201ENST00000272793 SRSF1Q07955 248 aaKnown RBP eCLIP13.53□□□□□ -0.24
UBR3-201ENST00000272793 ZNF107Q9UII5 783 aaPredicted RBP13.53□□□□□ -0.24
UBR3-201ENST00000272793 IGLV3-10A0A075B6K4 115 aa13.53□□□□□ -0.24
UBR3-201ENST00000272793 TPTE2P1Q5T6R2 138 aa13.53□□□□□ -0.24
UBR3-201ENST00000272793 A0A1W2PPI3 338 aa13.52□□□□□ -0.24
UBR3-201ENST00000272793 DEFB104AQ8WTQ1 72 aa13.52□□□□□ -0.24
UBR3-201ENST00000272793 OVOL2Q9BRP0 275 aa13.52□□□□□ -0.24
UBR3-201ENST00000272793 PRSS41Q7RTY9 318 aa13.52□□□□□ -0.25
UBR3-201ENST00000272793 LINC00518Q8N0U6 118 aa13.52□□□□□ -0.25
UBR3-201ENST00000272793 PLXNA1Q9UIW2 1896 aa13.52□□□□□ -0.25
UBR3-201ENST00000272793 FXYD1O00168 92 aa13.52□□□□□ -0.25
UBR3-201ENST00000272793 ERVK11-1P61568 191 aa13.52□□□□□ -0.25
UBR3-201ENST00000272793 LRRC61Q9BV99 259 aa13.52□□□□□ -0.25
UBR3-201ENST00000272793 IGKCP01834 107 aa13.52□□□□□ -0.25
UBR3-201ENST00000272793 CGB3P0DN86 165 aa13.52□□□□□ -0.25
UBR3-201ENST00000272793 DEFB121Q5J5C9 76 aa13.52□□□□□ -0.25
UBR3-201ENST00000272793 ZNF479Q96JC4 524 aa13.52□□□□□ -0.25
UBR3-201ENST00000272793 DSCR8Q96T75 97 aa13.52□□□□□ -0.25
UBR3-201ENST00000272793 MRM2Q9UI43 246 aaKnown RBP13.52□□□□□ -0.25
UBR3-201ENST00000272793 KLHDC2Q9Y2U9 406 aa13.52□□□□□ -0.25
UBR3-201ENST00000272793 LOC105371242A0A075B767 164 aa13.51□□□□□ -0.25
UBR3-201ENST00000272793 CDC42EP2O14613 210 aa13.51□□□□□ -0.25
UBR3-201ENST00000272793 HOXD4P09016 255 aaPredicted RBP13.51□□□□□ -0.25
UBR3-201ENST00000272793 RALGAPA2Q2PPJ7 1873 aa13.51□□□□□ -0.25
UBR3-201ENST00000272793 TJP1Q07157 1748 aa13.51□□□□□ -0.25
UBR3-201ENST00000272793 H0Y980 276 aa13.51□□□□□ -0.25
UBR3-201ENST00000272793 NTN1O95631 604 aa13.51□□□□□ -0.25
UBR3-201ENST00000272793 IGHG3P01860 377 aa13.51□□□□□ -0.25
UBR3-201ENST00000272793 CD5P06127 495 aa13.51□□□□□ -0.25
UBR3-201ENST00000272793 UMODP07911 640 aa13.51□□□□□ -0.25
UBR3-201ENST00000272793 PAX1P15863 534 aa13.51□□□□□ -0.25
UBR3-201ENST00000272793 PGFP49763 221 aa13.51□□□□□ -0.25
UBR3-201ENST00000272793 LAMTOR2Q9Y2Q5 125 aa13.51□□□□□ -0.25
UBR3-201ENST00000272793 SRD5A1P18405 259 aa13.51□□□□□ -0.25
UBR3-201ENST00000272793 LMO7DNF2Z398 122 aa13.51□□□□□ -0.25
UBR3-201ENST00000272793 GPHA2Q96T91 129 aa13.51□□□□□ -0.25
UBR3-201ENST00000272793 CISD1Q9NZ45 108 aaKnown RBP13.51□□□□□ -0.25
UBR3-201ENST00000272793 LAMB2P55268 1798 aa13.51□□□□□ -0.25
UBR3-201ENST00000272793 SCTP09683 121 aa13.5□□□□□ -0.25
UBR3-201ENST00000272793 UNC119Q13432 240 aa13.5□□□□□ -0.25
UBR3-201ENST00000272793 C9orf50Q5SZB4 431 aa13.5□□□□□ -0.25
UBR3-201ENST00000272793 TLNRD1Q9H1K6 362 aa13.5□□□□□ -0.25
UBR3-201ENST00000272793 LILRA1O75019 489 aa13.5□□□□□ -0.25
UBR3-201ENST00000272793 FMC1Q96HJ9 113 aa13.5□□□□□ -0.25
UBR3-201ENST00000272793 UBE2E2Q96LR5 201 aa13.5□□□□□ -0.25
UBR3-201ENST00000272793 TMEM238C9JI98 176 aa13.5□□□□□ -0.25
UBR3-201ENST00000272793 NDUFC2O95298 119 aa13.5□□□□□ -0.25
UBR3-201ENST00000272793 FAM57AQ8TBR7 257 aa13.5□□□□□ -0.25
UBR3-201ENST00000272793 SFXN3Q9BWM7 321 aa13.5□□□□□ -0.25
UBR3-201ENST00000272793 TRAV13-1A0A0B4J241 112 aa13.5□□□□□ -0.25
UBR3-201ENST00000272793 DCAF12L2Q5VW00 463 aa13.5□□□□□ -0.25
UBR3-201ENST00000272793 WFDC12Q8WWY7 111 aa13.5□□□□□ -0.25
UBR3-201ENST00000272793 KCNK17Q96T54 332 aa13.5□□□□□ -0.25
UBR3-201ENST00000272793 ARFGEF1Q9Y6D6 1849 aa13.5□□□□□ -0.25
UBR3-201ENST00000272793 THAP8Q8NA92 274 aa13.49□□□□□ -0.25
UBR3-201ENST00000272793 DPTQ07507 201 aa13.49□□□□□ -0.25
UBR3-201ENST00000272793 DLX4Q92988 240 aaPredicted RBP13.49□□□□□ -0.25
UBR3-201ENST00000272793 MIXL1Q9H2W2 232 aa13.49□□□□□ -0.25
UBR3-201ENST00000272793 FOXA2Q9Y261 457 aaPredicted RBP13.49□□□□□ -0.25
UBR3-201ENST00000272793 TRIP6Q15654 476 aaKnown RBP13.49□□□□□ -0.25
UBR3-201ENST00000272793 TMEM167AQ8TBQ9 72 aa13.49□□□□□ -0.25
UBR3-201ENST00000272793 PRADC1Q9BSG0 188 aa13.49□□□□□ -0.25
UBR3-201ENST00000272793 IGHV3-73A0A0B4J1V6 119 aa13.49□□□□□ -0.25
UBR3-201ENST00000272793 MRPL32Q9BYC8 188 aaKnown RBP13.49□□□□□ -0.25
UBR3-201ENST00000272793 FBXW9Q5XUX1 488 aa13.49□□□□□ -0.25
UBR3-201ENST00000272793 SBF1O95248 1867 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms