RNA–Protein interactions for RNA: ENST00000270061.11

SSBP4-201, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP4, Length 1,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-201ENST00000270061 A0A0U1RQK1 487 aa19.7■□□□□ 0.74
SSBP4-201ENST00000270061 H7C2Y5 167 aa19.7■□□□□ 0.74
SSBP4-201ENST00000270061 SHOXO15266 292 aa19.7■□□□□ 0.74
SSBP4-201ENST00000270061 KLRD1Q13241 179 aa19.7■□□□□ 0.74
SSBP4-201ENST00000270061 FAM74A1Q5RGS3 127 aa19.7■□□□□ 0.74
SSBP4-201ENST00000270061 PUSL1Q8N0Z8 303 aaKnown RBP19.7■□□□□ 0.74
SSBP4-201ENST00000270061 OR1S2Q8NGQ3 325 aa19.7■□□□□ 0.74
SSBP4-201ENST00000270061 TMED6Q8WW62 240 aa19.7■□□□□ 0.74
SSBP4-201ENST00000270061 MED9Q9NWA0 146 aa19.7■□□□□ 0.74
SSBP4-201ENST00000270061 FAM96BQ9Y3D0 163 aa19.7■□□□□ 0.74
SSBP4-201ENST00000270061 CEBPZOSA8MTT3 80 aa19.7■□□□□ 0.74
SSBP4-201ENST00000270061 UPK2O00526 184 aa19.7■□□□□ 0.74
SSBP4-201ENST00000270061 IFNA17P01571 189 aa19.7■□□□□ 0.74
SSBP4-201ENST00000270061 FOXL1Q12952 345 aa19.7■□□□□ 0.74
SSBP4-201ENST00000270061 SPANXN5Q5MJ07 72 aa19.7■□□□□ 0.74
SSBP4-201ENST00000270061 C3orf56Q8N813 242 aa19.7■□□□□ 0.74
SSBP4-201ENST00000270061 TNFRSF19Q9NS68 423 aa19.7■□□□□ 0.74
SSBP4-201ENST00000270061 FGF16O43320 207 aa19.69■□□□□ 0.74
SSBP4-201ENST00000270061 AWAT1Q58HT5 328 aa19.69■□□□□ 0.74
SSBP4-201ENST00000270061 HCP5Q6MZN7 132 aa19.69■□□□□ 0.74
SSBP4-201ENST00000270061 TMEM86BQ8N661 226 aa19.69■□□□□ 0.74
SSBP4-201ENST00000270061 RNF141Q8WVD5 230 aa19.69■□□□□ 0.74
SSBP4-201ENST00000270061 SSMEM1Q8WWF3 244 aa19.69■□□□□ 0.74
SSBP4-201ENST00000270061 HARBI1Q96MB7 349 aa19.69■□□□□ 0.74
SSBP4-201ENST00000270061 PRNDQ9UKY0 176 aa19.69■□□□□ 0.74
SSBP4-201ENST00000270061 DFFBO76075 338 aa19.68■□□□□ 0.74
SSBP4-201ENST00000270061 SEC11BP0C7V7 166 aa19.68■□□□□ 0.74
SSBP4-201ENST00000270061 UBE2E1P51965 193 aa19.68■□□□□ 0.74
SSBP4-201ENST00000270061 HSPE1P61604 102 aaKnown RBP19.68■□□□□ 0.74
SSBP4-201ENST00000270061 TMEM267Q0VDI3 215 aaPredicted RBP19.68■□□□□ 0.74
SSBP4-201ENST00000270061 CLINT1Q14677 625 aa19.68■□□□□ 0.74
SSBP4-201ENST00000270061 TMEM217Q8N7C4 229 aa19.68■□□□□ 0.74
SSBP4-201ENST00000270061 ATP5SQ99766 215 aa19.68■□□□□ 0.74
SSBP4-201ENST00000270061 ZNF257Q9Y2Q1 563 aa19.68■□□□□ 0.74
SSBP4-201ENST00000270061 STRAPQ9Y3F4 350 aaKnown RBP19.68■□□□□ 0.74
SSBP4-201ENST00000270061 A0A1W2PRD5 423 aa19.67■□□□□ 0.74
SSBP4-201ENST00000270061 A0A1W2PRF3 423 aa19.67■□□□□ 0.74
SSBP4-201ENST00000270061 A0A1W2PRM7 423 aa19.67■□□□□ 0.74
SSBP4-201ENST00000270061 ODF3BA8MYP8 253 aa19.67■□□□□ 0.74
SSBP4-201ENST00000270061 NPFFO15130 113 aa19.67■□□□□ 0.74
SSBP4-201ENST00000270061 METTL15P1P0C7V9 234 aa19.67■□□□□ 0.74
SSBP4-201ENST00000270061 S100A1P23297 94 aa19.67■□□□□ 0.74
SSBP4-201ENST00000270061 HBG1P69891 147 aa19.67■□□□□ 0.74
SSBP4-201ENST00000270061 HBG2P69892 147 aa19.67■□□□□ 0.74
SSBP4-201ENST00000270061 OR4A5Q8NH83 315 aa19.67■□□□□ 0.74
SSBP4-201ENST00000270061 IGHV1-3A0A0C4DH29 117 aa19.67■□□□□ 0.74
SSBP4-201ENST00000270061 FBP1P09467 338 aa19.67■□□□□ 0.74
SSBP4-201ENST00000270061 SAA1P0DJI8 122 aaPredicted RBP19.67■□□□□ 0.74
SSBP4-201ENST00000270061 RPEQ96AT9 228 aa19.67■□□□□ 0.74
SSBP4-201ENST00000270061 FKBP11Q9NYL4 201 aa19.67■□□□□ 0.74
SSBP4-201ENST00000270061 TCF19Q9Y242 345 aa19.67■□□□□ 0.74
SSBP4-201ENST00000270061 SCAF4O95104 1147 aaKnown RBP19.66■□□□□ 0.74
SSBP4-201ENST00000270061 ARG1P05089 322 aa19.66■□□□□ 0.74
SSBP4-201ENST00000270061 SPP1P10451 314 aa19.66■□□□□ 0.74
SSBP4-201ENST00000270061 HTR1DP28221 377 aa19.66■□□□□ 0.74
SSBP4-201ENST00000270061 VDAC2P45880 294 aaPredicted RBP19.66■□□□□ 0.74
SSBP4-201ENST00000270061 LGALS7P47929 136 aa19.66■□□□□ 0.74
SSBP4-201ENST00000270061 HAPLN4Q86UW8 402 aa19.66■□□□□ 0.74
SSBP4-201ENST00000270061 VSTM2AQ8TAG5 236 aa19.66■□□□□ 0.74
SSBP4-201ENST00000270061 OR4C12Q96R67 309 aa19.66■□□□□ 0.74
SSBP4-201ENST00000270061 DPM3Q9P2X0 92 aa19.66■□□□□ 0.74
SSBP4-201ENST00000270061 LEUTXA8MZ59 168 aa19.65■□□□□ 0.74
SSBP4-201ENST00000270061 KBTBD11O94819 623 aa19.65■□□□□ 0.74
SSBP4-201ENST00000270061 SAA4P35542 130 aa19.65■□□□□ 0.74
SSBP4-201ENST00000270061 RPS16P62249 146 aaKnown RBP19.65■□□□□ 0.74
SSBP4-201ENST00000270061 ARL16Q0P5N6 197 aa19.65■□□□□ 0.74
SSBP4-201ENST00000270061 CLCC1Q96S66 551 aa19.65■□□□□ 0.74
SSBP4-201ENST00000270061 TSNAXQ99598 290 aaKnown RBP19.65■□□□□ 0.74
SSBP4-201ENST00000270061 FAM181BA6NEQ2 426 aa19.65■□□□□ 0.74
SSBP4-201ENST00000270061 PMS2P5A8MQ11 134 aa19.65■□□□□ 0.74
SSBP4-201ENST00000270061 FGF2P09038 288 aa19.65■□□□□ 0.74
SSBP4-201ENST00000270061 SULT1A2P50226 295 aa19.65■□□□□ 0.74
SSBP4-201ENST00000270061 RPP30P78346 268 aaKnown RBP19.65■□□□□ 0.74
SSBP4-201ENST00000270061 TPTE2P1Q5T6R2 138 aa19.65■□□□□ 0.74
SSBP4-201ENST00000270061 RBMXL1Q96E39 390 aaKnown RBP19.65■□□□□ 0.74
SSBP4-201ENST00000270061 FAM210AQ96ND0 272 aa19.65■□□□□ 0.74
SSBP4-201ENST00000270061 HIPK2Q9H2X6 1198 aa19.65■□□□□ 0.74
SSBP4-201ENST00000270061 OR51B2Q9Y5P1 312 aa19.65■□□□□ 0.74
SSBP4-201ENST00000270061 FBXO24O75426 580 aa19.64■□□□□ 0.73
SSBP4-201ENST00000270061 IGLV2-23P01705 113 aa19.64■□□□□ 0.73
SSBP4-201ENST00000270061 IGHV4-59P01825 116 aa19.64■□□□□ 0.73
SSBP4-201ENST00000270061 CEACAM3P40198 252 aa19.64■□□□□ 0.73
SSBP4-201ENST00000270061 IER3P46695 156 aa19.64■□□□□ 0.73
SSBP4-201ENST00000270061 SPINK9Q5DT21 86 aa19.64■□□□□ 0.73
SSBP4-201ENST00000270061 TMEM167AQ8TBQ9 72 aa19.64■□□□□ 0.73
SSBP4-201ENST00000270061 CXorf58Q96LI9 332 aa19.64■□□□□ 0.73
SSBP4-201ENST00000270061 CRYBA1P05813 215 aa19.63■□□□□ 0.73
SSBP4-201ENST00000270061 ATP6V1FQ16864 119 aa19.63■□□□□ 0.73
SSBP4-201ENST00000270061 TAF15Q92804 592 aaKnown RBP eCLIP19.63■□□□□ 0.733e-6■■■□□ 16.3
SSBP4-201ENST00000270061 SAT2Q96F10 170 aaPredicted RBP19.63■□□□□ 0.73
SSBP4-201ENST00000270061 LDLRAD2Q5SZI1 272 aa19.62■□□□□ 0.73
SSBP4-201ENST00000270061 MOB3BQ86TA1 216 aa19.62■□□□□ 0.73
SSBP4-201ENST00000270061 COMMD7Q86VX2 200 aa19.62■□□□□ 0.73
SSBP4-201ENST00000270061 OR5B3Q8NH48 314 aa19.62■□□□□ 0.73
SSBP4-201ENST00000270061 RNF5Q99942 180 aa19.62■□□□□ 0.73
SSBP4-201ENST00000270061 PARD6GQ9BYG4 376 aaPredicted RBP19.62■□□□□ 0.73
SSBP4-201ENST00000270061 PLA2G2EQ9NZK7 142 aa19.62■□□□□ 0.73
SSBP4-201ENST00000270061 TET2Q6N021 2002 aaPredicted RBP19.62■□□□□ 0.73
SSBP4-201ENST00000270061 A0A1W2PPI3 338 aa19.62■□□□□ 0.73
SSBP4-201ENST00000270061 IFNA5P01569 189 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms