RNA–Protein interactions for RNA: ENST00000265810.8

PDLIM2-201, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-201ENST00000265810 TEX36Q5VZQ5 186 aa11.89□□□□□ -0.51
PDLIM2-201ENST00000265810 HIF1ANQ9NWT6 349 aa11.89□□□□□ -0.51
PDLIM2-201ENST00000265810 IGKV3-7A0A075B6H7 116 aa11.89□□□□□ -0.51
PDLIM2-201ENST00000265810 HYPMO75409 117 aa11.89□□□□□ -0.51
PDLIM2-201ENST00000265810 COMPP49747 757 aaPredicted RBP11.89□□□□□ -0.51
PDLIM2-201ENST00000265810 C22orf34Q6ZV56 151 aa11.89□□□□□ -0.51
PDLIM2-201ENST00000265810 KDF1Q8NAX2 398 aaPredicted RBP11.89□□□□□ -0.51
PDLIM2-201ENST00000265810 TMEM218A2RU14 115 aa11.89□□□□□ -0.51
PDLIM2-201ENST00000265810 C15orf61A6NNL5 157 aa11.89□□□□□ -0.51
PDLIM2-201ENST00000265810 DSCR9P59020 149 aa11.89□□□□□ -0.51
PDLIM2-201ENST00000265810 PPP1R27Q86WC6 154 aa11.89□□□□□ -0.51
PDLIM2-201ENST00000265810 ITLN2Q8WWU7 325 aaPredicted RBP11.89□□□□□ -0.51
PDLIM2-201ENST00000265810 LINC00052Q96N35 136 aa11.89□□□□□ -0.51
PDLIM2-201ENST00000265810 ZNF430Q9H8G1 570 aaPredicted RBP11.89□□□□□ -0.51
PDLIM2-201ENST00000265810 KIAA1324LA8MWY0 1029 aaPredicted RBP11.88□□□□□ -0.51
PDLIM2-201ENST00000265810 NBR2O15453 112 aa11.88□□□□□ -0.51
PDLIM2-201ENST00000265810 SELENOTP62341 195 aa11.88□□□□□ -0.51
PDLIM2-201ENST00000265810 SCGB2A2Q13296 93 aa11.88□□□□□ -0.51
PDLIM2-201ENST00000265810 GINS3Q9BRX5 216 aa11.88□□□□□ -0.51
PDLIM2-201ENST00000265810 TOLLIPQ9H0E2 274 aa11.88□□□□□ -0.51
PDLIM2-201ENST00000265810 SAV1Q9H4B6 383 aaPredicted RBP11.88□□□□□ -0.51
PDLIM2-201ENST00000265810 TRIOO75962 3097 aa11.88□□□□□ -0.51
PDLIM2-201ENST00000265810 DLX1P56177 255 aa11.88□□□□□ -0.51
PDLIM2-201ENST00000265810 SLC25A48Q6ZT89 311 aaKnown RBP11.88□□□□□ -0.51
PDLIM2-201ENST00000265810 C16orf82Q7Z2V1 217 aa11.88□□□□□ -0.51
PDLIM2-201ENST00000265810 DMRTC2Q8IXT2 367 aaPredicted RBP11.88□□□□□ -0.51
PDLIM2-201ENST00000265810 TEX29Q8N6K0 151 aa11.88□□□□□ -0.51
PDLIM2-201ENST00000265810 OR4A5Q8NH83 315 aa11.88□□□□□ -0.51
PDLIM2-201ENST00000265810 WDR61Q9GZS3 305 aaKnown RBP11.88□□□□□ -0.51
PDLIM2-201ENST00000265810 IFI27L2Q9H2X8 130 aa11.88□□□□□ -0.51
PDLIM2-201ENST00000265810 FOXI3A8MTJ6 420 aaPredicted RBP11.88□□□□□ -0.51
PDLIM2-201ENST00000265810 ZNF383Q8NA42 475 aa11.88□□□□□ -0.51
PDLIM2-201ENST00000265810 BIN3Q9NQY0 253 aa11.88□□□□□ -0.51
PDLIM2-201ENST00000265810 VAX2Q9UIW0 290 aa11.88□□□□□ -0.51
PDLIM2-201ENST00000265810 GAB2Q9UQC2 676 aa11.88□□□□□ -0.51
PDLIM2-201ENST00000265810 S4R3C0 116 aa11.88□□□□□ -0.51
PDLIM2-201ENST00000265810 IGHV3-35A0A0C4DH35 117 aa11.87□□□□□ -0.51
PDLIM2-201ENST00000265810 J3QKU1 62 aa11.87□□□□□ -0.51
PDLIM2-201ENST00000265810 NMSQ5H8A3 153 aa11.87□□□□□ -0.51
PDLIM2-201ENST00000265810 MANBALQ9NQG1 85 aa11.87□□□□□ -0.51
PDLIM2-201ENST00000265810 CXorf1O96002 111 aa11.87□□□□□ -0.51
PDLIM2-201ENST00000265810 GRAMD2BQ96HH9 432 aa11.87□□□□□ -0.51
PDLIM2-201ENST00000265810 NDFIP1Q9BT67 221 aa11.87□□□□□ -0.51
PDLIM2-201ENST00000265810 RD3LP0DJH9 198 aa11.87□□□□□ -0.51
PDLIM2-201ENST00000265810 LOXP28300 417 aaPredicted RBP11.87□□□□□ -0.51
PDLIM2-201ENST00000265810 MFAP4P55083 255 aa11.87□□□□□ -0.51
PDLIM2-201ENST00000265810 TMEM241Q24JQ0 296 aa11.87□□□□□ -0.51
PDLIM2-201ENST00000265810 TMEM204Q9BSN7 226 aa11.87□□□□□ -0.51
PDLIM2-201ENST00000265810 DLK1P80370 383 aa11.87□□□□□ -0.51
PDLIM2-201ENST00000265810 RAB24Q969Q5 203 aa11.87□□□□□ -0.51
PDLIM2-201ENST00000265810 PRRC2CQ9Y520 2896 aaKnown RBP11.86□□□□□ -0.51
PDLIM2-201ENST00000265810 IGHV1-3A0A0C4DH29 117 aa11.86□□□□□ -0.51
PDLIM2-201ENST00000265810 WNT2P09544 360 aa11.86□□□□□ -0.51
PDLIM2-201ENST00000265810 ATP5IP56385 69 aaPredicted RBP11.86□□□□□ -0.51
PDLIM2-201ENST00000265810 DPPA3Q6W0C5 159 aa11.86□□□□□ -0.51
PDLIM2-201ENST00000265810 OR5R1Q8NH85 324 aa11.86□□□□□ -0.51
PDLIM2-201ENST00000265810 HIGD1AQ9Y241 93 aa11.86□□□□□ -0.51
PDLIM2-201ENST00000265810 OR2J3O76001 311 aa11.86□□□□□ -0.51
PDLIM2-201ENST00000265810 ZNF90Q03938 601 aa11.86□□□□□ -0.51
PDLIM2-201ENST00000265810 C10orf55Q5SWW7 151 aa11.86□□□□□ -0.51
PDLIM2-201ENST00000265810 ZNF880Q6PDB4 577 aa11.86□□□□□ -0.51
PDLIM2-201ENST00000265810 SRSF12Q8WXF0 261 aaKnown RBP11.86□□□□□ -0.51
PDLIM2-201ENST00000265810 GAR1Q9NY12 217 aaKnown RBP11.86□□□□□ -0.51
PDLIM2-201ENST00000265810 TRAV3A0A0B4J244 114 aa11.86□□□□□ -0.51
PDLIM2-201ENST00000265810 DBX1A6NMT0 343 aa11.86□□□□□ -0.51
PDLIM2-201ENST00000265810 B4DSR2 109 aa11.86□□□□□ -0.51
PDLIM2-201ENST00000265810 ERVFC1-1P60608 527 aa11.86□□□□□ -0.51
PDLIM2-201ENST00000265810 C17orf58Q2M2W7 97 aa11.86□□□□□ -0.51
PDLIM2-201ENST00000265810 RPRMQ9NS64 109 aa11.86□□□□□ -0.51
PDLIM2-201ENST00000265810 LOXL3P58215 753 aa11.86□□□□□ -0.51
PDLIM2-201ENST00000265810 BRD3OSQ6XYD6 125 aa11.86□□□□□ -0.51
PDLIM2-201ENST00000265810 ZMAT5Q9UDW3 170 aaKnown RBP11.86□□□□□ -0.51
PDLIM2-201ENST00000265810 A0A0G2JRQ6 117 aa11.85□□□□□ -0.51
PDLIM2-201ENST00000265810 BUB1B-PAK6H3BSN5 160 aa11.85□□□□□ -0.51
PDLIM2-201ENST00000265810 M0R1W7 72 aa11.85□□□□□ -0.51
PDLIM2-201ENST00000265810 MMP23AO75900 390 aa11.85□□□□□ -0.51
PDLIM2-201ENST00000265810 DANCRP0C864 163 aa11.85□□□□□ -0.51
PDLIM2-201ENST00000265810 ARPC1AQ92747 370 aa11.85□□□□□ -0.51
PDLIM2-201ENST00000265810 HSPB7Q9UBY9 170 aa11.85□□□□□ -0.51
PDLIM2-201ENST00000265810 SZT2Q5T011 3432 aa11.85□□□□□ -0.51
PDLIM2-201ENST00000265810 RANP62826 216 aaKnown RBP11.85□□□□□ -0.51
PDLIM2-201ENST00000265810 STXBP6Q8NFX7 210 aa11.85□□□□□ -0.51
PDLIM2-201ENST00000265810 CLDND2Q8NHS1 167 aa11.85□□□□□ -0.51
PDLIM2-201ENST00000265810 FAM157CP0CG43 387 aa11.85□□□□□ -0.51
PDLIM2-201ENST00000265810 AGAP20933 346 aa11.85□□□□□ -0.51
PDLIM2-201ENST00000265810 BMI1P35226 326 aa11.85□□□□□ -0.51
PDLIM2-201ENST00000265810 TFF3Q07654 80 aa11.85□□□□□ -0.51
PDLIM2-201ENST00000265810 FBXL19-AS1Q494R0 122 aa11.85□□□□□ -0.51
PDLIM2-201ENST00000265810 ZNF585BQ52M93 769 aa11.85□□□□□ -0.51
PDLIM2-201ENST00000265810 OR10W1Q8NGF6 305 aa11.85□□□□□ -0.51
PDLIM2-201ENST00000265810 EAF1Q96JC9 268 aaPredicted RBP11.85□□□□□ -0.51
PDLIM2-201ENST00000265810 PAXXQ9BUH6 204 aa11.85□□□□□ -0.51
PDLIM2-201ENST00000265810 PPP5D1E7EU14 171 aa11.84□□□□□ -0.51
PDLIM2-201ENST00000265810 SUMO1P63165 101 aaKnown RBP11.84□□□□□ -0.51
PDLIM2-201ENST00000265810 SLC35B1P78383 322 aa11.84□□□□□ -0.51
PDLIM2-201ENST00000265810 KHDC3LQ587J8 217 aa11.84□□□□□ -0.51
PDLIM2-201ENST00000265810 TPTE2P1Q5T6R2 138 aa11.84□□□□□ -0.51
PDLIM2-201ENST00000265810 Q6ZRM9 215 aa11.84□□□□□ -0.51
PDLIM2-201ENST00000265810 A0A1W2PPQ1 181 aa11.84□□□□□ -0.51
PDLIM2-201ENST00000265810 H0YJW9 148 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms