RNA–Protein interactions for RNA: ENST00000265745.13

VPS41-201, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 2

Gene VPS41, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-201ENST00000265745 EEF1AKMT3Q96AZ1 226 aa7.33□□□□□ -1.24
VPS41-201ENST00000265745 YIPF6Q96EC8 236 aa7.33□□□□□ -1.24
VPS41-201ENST00000265745 NEURL2Q9BR09 285 aa7.33□□□□□ -1.24
VPS41-201ENST00000265745 SRSF8Q9BRL6 282 aaKnown RBP7.33□□□□□ -1.24
VPS41-201ENST00000265745 IFT46Q9NQC8 304 aa7.33□□□□□ -1.24
VPS41-201ENST00000265745 ZC4H2Q9NQZ6 224 aa7.33□□□□□ -1.24
VPS41-201ENST00000265745 TMEM140Q9NV12 185 aa7.33□□□□□ -1.24
VPS41-201ENST00000265745 S4R3C0 116 aa7.33□□□□□ -1.24
VPS41-201ENST00000265745 TRBV7-1A0A0A6YYK4 115 aa7.32□□□□□ -1.24
VPS41-201ENST00000265745 ZNF320A2RRD8 509 aa7.32□□□□□ -1.24
VPS41-201ENST00000265745 TMEM213A2RRL7 107 aa7.32□□□□□ -1.24
VPS41-201ENST00000265745 MFSD2BA6NFX1 497 aa7.32□□□□□ -1.24
VPS41-201ENST00000265745 PGLYRP1O75594 196 aaPredicted RBP7.32□□□□□ -1.24
VPS41-201ENST00000265745 TPPPO94811 219 aa7.32□□□□□ -1.24
VPS41-201ENST00000265745 S1PR2O95136 353 aa7.32□□□□□ -1.24
VPS41-201ENST00000265745 PTBP1P26599 531 aaKnown RBP eCLIP7.32□□□□□ -1.24
VPS41-201ENST00000265745 CD81P60033 236 aa7.32□□□□□ -1.24
VPS41-201ENST00000265745 HERV-K104P61576 105 aa7.32□□□□□ -1.24
VPS41-201ENST00000265745 LSM3P62310 102 aaKnown RBP7.32□□□□□ -1.24
VPS41-201ENST00000265745 UBE2NLQ5JXB2 153 aa7.32□□□□□ -1.24
VPS41-201ENST00000265745 TMEM69Q5SWH9 247 aa7.32□□□□□ -1.24
VPS41-201ENST00000265745 AADACL3Q5VUY0 350 aa7.32□□□□□ -1.24
VPS41-201ENST00000265745 LYSMD2Q8IV50 215 aa7.32□□□□□ -1.24
VPS41-201ENST00000265745 DYNLRB2Q8TF09 96 aa7.32□□□□□ -1.24
VPS41-201ENST00000265745 BORCS5Q969J3 196 aa7.32□□□□□ -1.24
VPS41-201ENST00000265745 MOB3AQ96BX8 217 aa7.32□□□□□ -1.24
VPS41-201ENST00000265745 ISOC1Q96CN7 298 aa7.32□□□□□ -1.24
VPS41-201ENST00000265745 CXorf58Q96LI9 332 aa7.32□□□□□ -1.24
VPS41-201ENST00000265745 ZNF2Q9BSG1 426 aaPredicted RBP7.32□□□□□ -1.24
VPS41-201ENST00000265745 COMMD5Q9GZQ3 224 aa7.32□□□□□ -1.24
VPS41-201ENST00000265745 HIPK2Q9H2X6 1198 aa7.32□□□□□ -1.24
VPS41-201ENST00000265745 PLEKHA3Q9HB20 300 aa7.32□□□□□ -1.24
VPS41-201ENST00000265745 PALMDQ9NP74 551 aa7.32□□□□□ -1.24
VPS41-201ENST00000265745 SLC2A8Q9NY64 477 aa7.32□□□□□ -1.24
VPS41-201ENST00000265745 EHFQ9NZC4 300 aa7.32□□□□□ -1.24
VPS41-201ENST00000265745 A0A087WXM4 84 aa7.31□□□□□ -1.24
VPS41-201ENST00000265745 TEX50A0A1B0GTY4 177 aa7.31□□□□□ -1.24
VPS41-201ENST00000265745 RBMY1BA6NDE4 496 aaKnown RBP7.31□□□□□ -1.24
VPS41-201ENST00000265745 RBMY1EA6NEQ0 496 aaKnown RBP7.31□□□□□ -1.24
VPS41-201ENST00000265745 A8MWP6 167 aa7.31□□□□□ -1.24
VPS41-201ENST00000265745 OR11H12B2RN74 326 aa7.31□□□□□ -1.24
VPS41-201ENST00000265745 PMP2P02689 132 aa7.31□□□□□ -1.24
VPS41-201ENST00000265745 IFNA6P05013 189 aa7.31□□□□□ -1.24
VPS41-201ENST00000265745 RBMY1DP0C7P1 496 aaKnown RBP7.31□□□□□ -1.24
VPS41-201ENST00000265745 RPA2P15927 270 aa7.31□□□□□ -1.24
VPS41-201ENST00000265745 F2RP25116 425 aa7.31□□□□□ -1.24
VPS41-201ENST00000265745 PRSS3P35030 304 aa7.31□□□□□ -1.24
VPS41-201ENST00000265745 TAS2R20P59543 309 aa7.31□□□□□ -1.24
VPS41-201ENST00000265745 GUCA2BQ16661 112 aa7.31□□□□□ -1.24
VPS41-201ENST00000265745 ZFAND6Q6FIF0 208 aa7.31□□□□□ -1.24
VPS41-201ENST00000265745 WFDC3Q8IUB2 231 aa7.31□□□□□ -1.24
VPS41-201ENST00000265745 CADM3Q8N126 398 aa7.31□□□□□ -1.24
VPS41-201ENST00000265745 DEFB125Q8N687 156 aa7.31□□□□□ -1.24
VPS41-201ENST00000265745 UXS1Q8NBZ7 420 aa7.31□□□□□ -1.24
VPS41-201ENST00000265745 DMBX1Q8NFW5 382 aa7.31□□□□□ -1.24
VPS41-201ENST00000265745 TSPAN14Q8NG11 270 aa7.31□□□□□ -1.24
VPS41-201ENST00000265745 OR10W1Q8NGF6 305 aa7.31□□□□□ -1.24
VPS41-201ENST00000265745 OR6F1Q8NGZ6 308 aa7.31□□□□□ -1.24
VPS41-201ENST00000265745 ZNF502Q8TBZ5 544 aa7.31□□□□□ -1.24
VPS41-201ENST00000265745 FCAMRQ8WWV6 532 aa7.31□□□□□ -1.24
VPS41-201ENST00000265745 CACNG8Q8WXS5 425 aa7.31□□□□□ -1.24
VPS41-201ENST00000265745 SLC25A46Q96AG3 418 aa7.31□□□□□ -1.24
VPS41-201ENST00000265745 DGCR14Q96DF8 476 aaKnown RBP7.31□□□□□ -1.24
VPS41-201ENST00000265745 QTRT1Q9BXR0 403 aaKnown RBP7.31□□□□□ -1.24
VPS41-201ENST00000265745 COMMD9Q9P000 198 aa7.31□□□□□ -1.24
VPS41-201ENST00000265745 CEPT1Q9Y6K0 416 aa7.31□□□□□ -1.24
VPS41-201ENST00000265745 KRASP01116 189 aa7.3□□□□□ -1.24
VPS41-201ENST00000265745 RLN1P04808 185 aa7.3□□□□□ -1.24
VPS41-201ENST00000265745 SERPINE2P07093 398 aa7.3□□□□□ -1.24
VPS41-201ENST00000265745 TRAPPC2P0DI81 140 aa7.3□□□□□ -1.24
VPS41-201ENST00000265745 TRAPPC2BP0DI82 140 aa7.3□□□□□ -1.24
VPS41-201ENST00000265745 C8orf88P0DMB2 117 aa7.3□□□□□ -1.24
VPS41-201ENST00000265745 OR13C7P0DN81 318 aa7.3□□□□□ -1.24
VPS41-201ENST00000265745 LPAR6P43657 344 aa7.3□□□□□ -1.24
VPS41-201ENST00000265745 TAS2R46P59540 309 aa7.3□□□□□ -1.24
VPS41-201ENST00000265745 WT1-ASQ06250 92 aa7.3□□□□□ -1.24
VPS41-201ENST00000265745 ZNF585BQ52M93 769 aa7.3□□□□□ -1.24
VPS41-201ENST00000265745 ZNF57Q68EA5 555 aaPredicted RBP7.3□□□□□ -1.24
VPS41-201ENST00000265745 THOC7Q6I9Y2 204 aaKnown RBP7.3□□□□□ -1.24
VPS41-201ENST00000265745 UNQ9165/PRO28630Q6UXU0 137 aa7.3□□□□□ -1.24
VPS41-201ENST00000265745 HSD17B13Q7Z5P4 300 aaPredicted RBP7.3□□□□□ -1.24
VPS41-201ENST00000265745 CMTM1Q8IZ96 169 aa7.3□□□□□ -1.24
VPS41-201ENST00000265745 TMEM61Q8N0U2 210 aa7.3□□□□□ -1.24
VPS41-201ENST00000265745 GDPD1Q8N9F7 314 aa7.3□□□□□ -1.24
VPS41-201ENST00000265745 OR5H2Q8NGV7 314 aa7.3□□□□□ -1.24
VPS41-201ENST00000265745 VN1R17PQ8TDU5 208 aa7.3□□□□□ -1.24
VPS41-201ENST00000265745 WFDC10AQ9H1F0 79 aa7.3□□□□□ -1.24
VPS41-201ENST00000265745 VCX3AQ9NNX9 186 aa7.3□□□□□ -1.24
VPS41-201ENST00000265745 NDUFA4L2Q9NRX3 87 aa7.3□□□□□ -1.24
VPS41-201ENST00000265745 THYN1Q9P016 225 aa7.3□□□□□ -1.24
VPS41-201ENST00000265745 MLXQ9UH92 298 aa7.3□□□□□ -1.24
VPS41-201ENST00000265745 SELENOKQ9Y6D0 94 aa7.3□□□□□ -1.24
VPS41-201ENST00000265745 LCE6AA0A183 80 aa7.29□□□□□ -1.24
VPS41-201ENST00000265745 MARCH11A6NNE9 402 aa7.29□□□□□ -1.24
VPS41-201ENST00000265745 GPR31O00270 319 aa7.29□□□□□ -1.24
VPS41-201ENST00000265745 TNFAIP8O95379 198 aa7.29□□□□□ -1.24
VPS41-201ENST00000265745 EIF4EP06730 217 aaKnown RBP7.29□□□□□ -1.24
VPS41-201ENST00000265745 HLA-DMAP28067 261 aa7.29□□□□□ -1.24
VPS41-201ENST00000265745 GPR183P32249 361 aa7.29□□□□□ -1.24
VPS41-201ENST00000265745 HRH1P35367 487 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms