RNA–Protein interactions for RNA: ENST00000264723.8

CSPG5-201, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CSPG5, Length 4,080 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-201ENST00000264723 ZNF586Q9NXT0 402 aa16.53■□□□□ 0.24
CSPG5-201ENST00000264723 LINC00473A8K010 186 aa16.52■□□□□ 0.24
CSPG5-201ENST00000264723 H3BTX0 84 aa16.52■□□□□ 0.24
CSPG5-201ENST00000264723 MYOD1P15172 320 aa16.52■□□□□ 0.24
CSPG5-201ENST00000264723 PRR31Q5SQ13 230 aa16.52■□□□□ 0.24
CSPG5-201ENST00000264723 HIST3H2BBQ8N257 126 aa16.52■□□□□ 0.24
CSPG5-201ENST00000264723 HIST1H2BLQ99880 126 aa16.52■□□□□ 0.24
CSPG5-201ENST00000264723 SPTBN4Q9H254 2564 aa16.52■□□□□ 0.24
CSPG5-201ENST00000264723 LYNX1G3V0Z9 82 aa16.52■□□□□ 0.24
CSPG5-201ENST00000264723 LYNX1P0DP58 116 aa16.52■□□□□ 0.24
CSPG5-201ENST00000264723 CCL3L1P16619 93 aa16.52■□□□□ 0.24
CSPG5-201ENST00000264723 ZNF726P1Q15940 193 aa16.52■□□□□ 0.24
CSPG5-201ENST00000264723 DOLPP1Q86YN1 238 aa16.52■□□□□ 0.24
CSPG5-201ENST00000264723 C1orf174Q8IYL3 243 aa16.52■□□□□ 0.24
CSPG5-201ENST00000264723 OR1B1Q8NGR6 318 aa16.52■□□□□ 0.24
CSPG5-201ENST00000264723 WDR86Q86TI4 376 aa16.52■□□□□ 0.23
CSPG5-201ENST00000264723 C1orf162Q8NEQ5 155 aaPredicted RBP16.52■□□□□ 0.23
CSPG5-201ENST00000264723 TNCP24821 2201 aa16.52■□□□□ 0.23
CSPG5-201ENST00000264723 TRAV3A0A0B4J244 114 aa16.51■□□□□ 0.23
CSPG5-201ENST00000264723 REG1AP05451 166 aa16.51■□□□□ 0.23
CSPG5-201ENST00000264723 PLA2G2CQ5R387 149 aa16.51■□□□□ 0.23
CSPG5-201ENST00000264723 PQLC2Q6ZP29 291 aa16.51■□□□□ 0.23
CSPG5-201ENST00000264723 FAM57AQ8TBR7 257 aa16.51■□□□□ 0.23
CSPG5-201ENST00000264723 HSPB9Q9BQS6 159 aa16.51■□□□□ 0.23
CSPG5-201ENST00000264723 PAX5Q02548 391 aa16.51■□□□□ 0.23
CSPG5-201ENST00000264723 MMDQ15546 238 aa16.51■□□□□ 0.23
CSPG5-201ENST00000264723 VSTM2AQ8TAG5 236 aa16.51■□□□□ 0.23
CSPG5-201ENST00000264723 VAMP8Q9BV40 100 aa16.51■□□□□ 0.23
CSPG5-201ENST00000264723 TMEM250H0YL14 139 aa16.51■□□□□ 0.23
CSPG5-201ENST00000264723 IGKV1D-33P01593 117 aa16.51■□□□□ 0.23
CSPG5-201ENST00000264723 IGKV1-33P01594 117 aa16.51■□□□□ 0.23
CSPG5-201ENST00000264723 ARF6P62330 175 aa16.51■□□□□ 0.23
CSPG5-201ENST00000264723 KDF1Q8NAX2 398 aaPredicted RBP16.51■□□□□ 0.23
CSPG5-201ENST00000264723 OR1L8Q8NGR8 309 aa16.51■□□□□ 0.23
CSPG5-201ENST00000264723 SLC45A2Q9UMX9 530 aa16.51■□□□□ 0.23
CSPG5-201ENST00000264723 CD81P60033 236 aa16.5■□□□□ 0.23
CSPG5-201ENST00000264723 LYZP61626 148 aa16.5■□□□□ 0.23
CSPG5-201ENST00000264723 PEAR1Q5VY43 1037 aaPredicted RBP16.5■□□□□ 0.23
CSPG5-201ENST00000264723 A0A1W2PNU3 283 aaPredicted RBP16.5■□□□□ 0.23
CSPG5-201ENST00000264723 ZNF729A6NN14 1252 aaPredicted RBP16.5■□□□□ 0.23
CSPG5-201ENST00000264723 CGAP01215 116 aa16.5■□□□□ 0.23
CSPG5-201ENST00000264723 WT1P19544 449 aaPredicted RBP16.5■□□□□ 0.23
CSPG5-201ENST00000264723 OR8B3Q8NGG8 313 aa16.5■□□□□ 0.23
CSPG5-201ENST00000264723 OR8B2Q96RD0 313 aa16.5■□□□□ 0.23
CSPG5-201ENST00000264723 IDI2-AS1Q9NZ38 188 aa16.5■□□□□ 0.23
CSPG5-201ENST00000264723 IL19Q9UHD0 177 aa16.5■□□□□ 0.23
CSPG5-201ENST00000264723 JPT1Q9UK76 154 aa16.5■□□□□ 0.23
CSPG5-201ENST00000264723 TMEM183AQ8IXX5 376 aa16.5■□□□□ 0.23
CSPG5-201ENST00000264723 A0A1W2PN81 502 aa16.5■□□□□ 0.23
CSPG5-201ENST00000264723 HSBP1O75506 76 aa16.5■□□□□ 0.23
CSPG5-201ENST00000264723 RPEL1Q2QD12 228 aa16.5■□□□□ 0.23
CSPG5-201ENST00000264723 HAPLN4Q86UW8 402 aa16.5■□□□□ 0.23
CSPG5-201ENST00000264723 C1QL4Q86Z23 238 aa16.5■□□□□ 0.23
CSPG5-201ENST00000264723 MBD3L1Q8WWY6 194 aa16.5■□□□□ 0.23
CSPG5-201ENST00000264723 SSBP3Q9BWW4 388 aaPredicted RBP16.5■□□□□ 0.23
CSPG5-201ENST00000264723 A0A1B0GUS0 222 aa16.49■□□□□ 0.23
CSPG5-201ENST00000264723 RANP62826 216 aaKnown RBP16.49■□□□□ 0.23
CSPG5-201ENST00000264723 STPG3Q8N7X2 389 aa16.49■□□□□ 0.23
CSPG5-201ENST00000264723 MLNRO43193 412 aa16.49■□□□□ 0.23
CSPG5-201ENST00000264723 CA2P00918 260 aa16.49■□□□□ 0.23
CSPG5-201ENST00000264723 IGFBP2P18065 325 aa16.49■□□□□ 0.23
CSPG5-201ENST00000264723 IFNL4K9M1U5 179 aa16.49■□□□□ 0.23
CSPG5-201ENST00000264723 GCSAMQ8N6F7 178 aa16.49■□□□□ 0.23
CSPG5-201ENST00000264723 CHD8Q9HCK8 2581 aa16.49■□□□□ 0.23
CSPG5-201ENST00000264723 ANKRD11Q6UB99 2663 aaPredicted RBP16.48■□□□□ 0.23
CSPG5-201ENST00000264723 TMPRSS3P57727 454 aa16.48■□□□□ 0.23
CSPG5-201ENST00000264723 CYB5R2Q6BCY4 276 aa16.48■□□□□ 0.23
CSPG5-201ENST00000264723 SPACA3Q8IXA5 215 aa16.48■□□□□ 0.23
CSPG5-201ENST00000264723 COQ2Q96H96 371 aa16.48■□□□□ 0.23
CSPG5-201ENST00000264723 RAXQ9Y2V3 346 aa16.48■□□□□ 0.23
CSPG5-201ENST00000264723 TCAPO15273 167 aa16.48■□□□□ 0.23
CSPG5-201ENST00000264723 SLC25A5P05141 298 aaKnown RBP16.48■□□□□ 0.23
CSPG5-201ENST00000264723 HIST1H1BP16401 226 aaKnown RBP16.48■□□□□ 0.23
CSPG5-201ENST00000264723 RAB4AP20338 218 aa16.48■□□□□ 0.23
CSPG5-201ENST00000264723 MUC15Q8N387 334 aa16.48■□□□□ 0.23
CSPG5-201ENST00000264723 HSPB7Q9UBY9 170 aa16.48■□□□□ 0.23
CSPG5-201ENST00000264723 SFRP2Q96HF1 295 aa16.48■□□□□ 0.23
CSPG5-201ENST00000264723 Q56UQ5 140 aa16.47■□□□□ 0.23
CSPG5-201ENST00000264723 LHFPL4Q7Z7J7 247 aa16.47■□□□□ 0.23
CSPG5-201ENST00000264723 LYPD6BQ8NI32 183 aa16.47■□□□□ 0.23
CSPG5-201ENST00000264723 GATCO43716 136 aaKnown RBP16.47■□□□□ 0.23
CSPG5-201ENST00000264723 HSPE1P61604 102 aaKnown RBP16.47■□□□□ 0.23
CSPG5-201ENST00000264723 RNASEKQ6P5S7 137 aaKnown RBP16.47■□□□□ 0.23
CSPG5-201ENST00000264723 IGHV2-5P01817 119 aa16.47■□□□□ 0.23
CSPG5-201ENST00000264723 SNRNP40Q96DI7 357 aaKnown RBP16.47■□□□□ 0.23
CSPG5-201ENST00000264723 SEBOXQ9HB31 216 aaPredicted RBP16.47■□□□□ 0.23
CSPG5-201ENST00000264723 PLSCR4Q9NRQ2 329 aa16.47■□□□□ 0.23
CSPG5-201ENST00000264723 TECRQ9NZ01 308 aaKnown RBP16.47■□□□□ 0.23
CSPG5-201ENST00000264723 PTPN13Q12923 2485 aa16.47■□□□□ 0.23
CSPG5-201ENST00000264723 TDGF1P13385 188 aa16.46■□□□□ 0.23
CSPG5-201ENST00000264723 LINC00469Q8N7U9 141 aa16.46■□□□□ 0.23
CSPG5-201ENST00000264723 IL6RP08887 468 aaPredicted RBP16.46■□□□□ 0.23
CSPG5-201ENST00000264723 RPL8P62917 257 aaKnown RBP16.46■□□□□ 0.23
CSPG5-201ENST00000264723 ZNF146Q15072 292 aa16.46■□□□□ 0.23
CSPG5-201ENST00000264723 SPATA31B1PQ5VZV4 182 aa16.46■□□□□ 0.23
CSPG5-201ENST00000264723 HIF1ANQ9NWT6 349 aa16.46■□□□□ 0.23
CSPG5-201ENST00000264723 AMBPP02760 352 aa16.46■□□□□ 0.23
CSPG5-201ENST00000264723 HLA-DRB5Q30154 266 aa16.46■□□□□ 0.23
CSPG5-201ENST00000264723 OR5AU1Q8NGC0 362 aa16.46■□□□□ 0.23
CSPG5-201ENST00000264723 IGHV1-69-2A0A0G2JMI3 117 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms