RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 FAM90A12PA8MX19 464 aa10.19□□□□□ -0.78
SMG6-201ENST00000263073 FAM90A5PA8MXJ8 464 aa10.19□□□□□ -0.78
SMG6-201ENST00000263073 FAM90A23PA8MXZ1 464 aa10.19□□□□□ -0.78
SMG6-201ENST00000263073 PEX7O00628 323 aa10.19□□□□□ -0.78
SMG6-201ENST00000263073 RAMP3O60896 148 aa10.19□□□□□ -0.78
SMG6-201ENST00000263073 FAM90A15PP0C7V4 464 aa10.19□□□□□ -0.78
SMG6-201ENST00000263073 FAM90A13PP0C7W8 464 aa10.19□□□□□ -0.78
SMG6-201ENST00000263073 FAM90A14PP0C7W9 464 aa10.19□□□□□ -0.78
SMG6-201ENST00000263073 FAM90A24PP0C7X0 464 aa10.19□□□□□ -0.78
SMG6-201ENST00000263073 PLAURQ03405 335 aa10.19□□□□□ -0.78
SMG6-201ENST00000263073 JPT1Q9UK76 154 aa10.19□□□□□ -0.78
SMG6-201ENST00000263073 NRXN2Q9P2S2 1712 aa10.19□□□□□ -0.78
SMG6-201ENST00000263073 TMEM250H0YL14 139 aa10.19□□□□□ -0.78
SMG6-201ENST00000263073 IGHV4-39P01824 125 aa10.19□□□□□ -0.78
SMG6-201ENST00000263073 SMRP1Q8NCR6 262 aa10.19□□□□□ -0.78
SMG6-201ENST00000263073 A0A1B0GV72 72 aa10.19□□□□□ -0.78
SMG6-201ENST00000263073 NPIPB6E9PJ23 425 aa10.19□□□□□ -0.78
SMG6-201ENST00000263073 ZNF324BQ6AW86 544 aaPredicted RBP10.19□□□□□ -0.78
SMG6-201ENST00000263073 COL4A5P29400 1685 aa10.18□□□□□ -0.78
SMG6-201ENST00000263073 HAX1O00165 279 aa10.18□□□□□ -0.78
SMG6-201ENST00000263073 VENTXO95231 258 aa10.18□□□□□ -0.78
SMG6-201ENST00000263073 NBEAP1P0C6P0 100 aa10.18□□□□□ -0.78
SMG6-201ENST00000263073 ZNF525Q8N782 197 aa10.18□□□□□ -0.78
SMG6-201ENST00000263073 LDLRAD2Q5SZI1 272 aa10.18□□□□□ -0.78
SMG6-201ENST00000263073 GFI1Q99684 422 aa10.18□□□□□ -0.78
SMG6-201ENST00000263073 FBXL15Q9H469 300 aa10.18□□□□□ -0.78
SMG6-201ENST00000263073 GEMIN7Q9H840 131 aaKnown RBP10.18□□□□□ -0.78
SMG6-201ENST00000263073 CELA3BP08861 270 aa10.18□□□□□ -0.78
SMG6-201ENST00000263073 PPIFP30405 207 aaKnown RBP10.18□□□□□ -0.78
SMG6-201ENST00000263073 SUMO2P61956 95 aaKnown RBP10.18□□□□□ -0.78
SMG6-201ENST00000263073 RTN4RL2Q86UN3 420 aa10.18□□□□□ -0.78
SMG6-201ENST00000263073 NHP2Q9NX24 153 aaKnown RBP10.18□□□□□ -0.78
SMG6-201ENST00000263073 IGKV1D-8A0A087WSZ0 117 aa10.17□□□□□ -0.78
SMG6-201ENST00000263073 LHX2P50458 406 aa10.17□□□□□ -0.78
SMG6-201ENST00000263073 FBLN7Q53RD9 439 aa10.17□□□□□ -0.78
SMG6-201ENST00000263073 DMRTC2Q8IXT2 367 aaPredicted RBP10.17□□□□□ -0.78
SMG6-201ENST00000263073 CHRNA10Q9GZZ6 450 aa10.17□□□□□ -0.78
SMG6-201ENST00000263073 UNC13CQ8NB66 2214 aa10.17□□□□□ -0.78
SMG6-201ENST00000263073 LEPP41159 167 aa10.17□□□□□ -0.78
SMG6-201ENST00000263073 FXYD7P58549 80 aa10.17□□□□□ -0.78
SMG6-201ENST00000263073 JKAMPQ9P055 326 aa10.17□□□□□ -0.78
SMG6-201ENST00000263073 FAM181BA6NEQ2 426 aa10.17□□□□□ -0.78
SMG6-201ENST00000263073 EVI2AP22794 236 aa10.17□□□□□ -0.78
SMG6-201ENST00000263073 ZNF124Q15973 351 aa10.17□□□□□ -0.78
SMG6-201ENST00000263073 C5orf24Q7Z6I8 188 aa10.17□□□□□ -0.78
SMG6-201ENST00000263073 TEX45Q8NA69 505 aa10.17□□□□□ -0.78
SMG6-201ENST00000263073 GLMPQ8WWB7 406 aa10.17□□□□□ -0.78
SMG6-201ENST00000263073 C18orf12Q96KH6 178 aa10.17□□□□□ -0.78
SMG6-201ENST00000263073 SCGB3A1Q96QR1 104 aa10.17□□□□□ -0.78
SMG6-201ENST00000263073 NDUFAF3Q9BU61 184 aa10.17□□□□□ -0.78
SMG6-201ENST00000263073 A0A0A6YYD4 124 aa10.17□□□□□ -0.78
SMG6-201ENST00000263073 DDB2Q92466 427 aa10.17□□□□□ -0.78
SMG6-201ENST00000263073 MRPL32Q9BYC8 188 aaKnown RBP10.17□□□□□ -0.78
SMG6-201ENST00000263073 RPP21Q9H633 154 aaKnown RBP10.17□□□□□ -0.78
SMG6-201ENST00000263073 TNS1Q9HBL0 1735 aaKnown RBP10.17□□□□□ -0.78
SMG6-201ENST00000263073 UBE2CO00762 179 aa10.17□□□□□ -0.78
SMG6-201ENST00000263073 CEACAM1P13688 526 aa10.17□□□□□ -0.78
SMG6-201ENST00000263073 PCOLCEQ15113 449 aa10.17□□□□□ -0.78
SMG6-201ENST00000263073 FAM216BQ8N7L0 139 aa10.17□□□□□ -0.78
SMG6-201ENST00000263073 OR5AN1Q8NGI8 311 aa10.17□□□□□ -0.78
SMG6-201ENST00000263073 SCARF2Q96GP6 870 aaPredicted RBP10.17□□□□□ -0.78
SMG6-201ENST00000263073 HIST1H2BLQ99880 126 aa10.17□□□□□ -0.78
SMG6-201ENST00000263073 PLXNB2O15031 1838 aa10.17□□□□□ -0.78
SMG6-201ENST00000263073 COL11A1P12107 1806 aaPredicted RBP10.17□□□□□ -0.78
SMG6-201ENST00000263073 SYNGR3O43761 229 aa10.16□□□□□ -0.78
SMG6-201ENST00000263073 PYYP10082 97 aa10.16□□□□□ -0.78
SMG6-201ENST00000263073 SFTPCP11686 197 aa10.16□□□□□ -0.78
SMG6-201ENST00000263073 GPR183P32249 361 aa10.16□□□□□ -0.78
SMG6-201ENST00000263073 NUP37Q8NFH4 326 aa10.16□□□□□ -0.78
SMG6-201ENST00000263073 NEUROG3Q9Y4Z2 214 aa10.16□□□□□ -0.78
SMG6-201ENST00000263073 CACNA1IQ9P0X4 2223 aa10.16□□□□□ -0.78
SMG6-201ENST00000263073 A0A1W2PQM1 296 aa10.16□□□□□ -0.78
SMG6-201ENST00000263073 ATP5G2Q06055 141 aa10.16□□□□□ -0.78
SMG6-201ENST00000263073 TTC9CQ8N5M4 171 aa10.16□□□□□ -0.78
SMG6-201ENST00000263073 FADS6Q8N9I5 356 aa10.16□□□□□ -0.78
SMG6-201ENST00000263073 TMEM170AQ8WVE7 144 aa10.16□□□□□ -0.78
SMG6-201ENST00000263073 SIGLEC12Q96PQ1 595 aa10.16□□□□□ -0.78
SMG6-201ENST00000263073 IFI27L2Q9H2X8 130 aa10.16□□□□□ -0.78
SMG6-201ENST00000263073 CRIM1Q9NZV1 1036 aa10.16□□□□□ -0.78
SMG6-201ENST00000263073 A0A087WWC5 75 aa10.16□□□□□ -0.78
SMG6-201ENST00000263073 TMEM262E9PQX1 116 aa10.16□□□□□ -0.78
SMG6-201ENST00000263073 FAM71F2Q6NXP2 309 aa10.16□□□□□ -0.78
SMG6-201ENST00000263073 SAXO1Q8IYX7 474 aa10.16□□□□□ -0.78
SMG6-201ENST00000263073 RNASEH2CQ8TDP1 164 aaKnown RBP10.16□□□□□ -0.78
SMG6-201ENST00000263073 WFDC12Q8WWY7 111 aa10.16□□□□□ -0.78
SMG6-201ENST00000263073 KIR2DL4Q99706 377 aa10.16□□□□□ -0.78
SMG6-201ENST00000263073 FOXD3Q9UJU5 478 aaPredicted RBP10.16□□□□□ -0.78
SMG6-201ENST00000263073 ASXL3Q9C0F0 2248 aa10.16□□□□□ -0.78
SMG6-201ENST00000263073 RPS20P60866 119 aaKnown RBP10.16□□□□□ -0.78
SMG6-201ENST00000263073 DUX5Q96PT3 197 aa10.16□□□□□ -0.78
SMG6-201ENST00000263073 ATAD5Q96QE3 1844 aa10.16□□□□□ -0.78
SMG6-201ENST00000263073 EPOPA6NHQ4 379 aa10.16□□□□□ -0.78
SMG6-201ENST00000263073 NAPSAO96009 420 aa10.16□□□□□ -0.78
SMG6-201ENST00000263073 ACP7Q6ZNF0 438 aa10.16□□□□□ -0.78
SMG6-201ENST00000263073 PLPPR1Q8TBJ4 325 aa10.16□□□□□ -0.78
SMG6-201ENST00000263073 TM2D1Q9BX74 207 aa10.16□□□□□ -0.78
SMG6-201ENST00000263073 A0A1B0GTI1 187 aa10.15□□□□□ -0.78
SMG6-201ENST00000263073 C5orf67F2Z3F1 127 aa10.15□□□□□ -0.78
SMG6-201ENST00000263073 PTGDSP41222 190 aa10.15□□□□□ -0.78
SMG6-201ENST00000263073 Q9H3A6 140 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms