RNA–Protein interactions for RNA: ENST00000262539.7

PTPN3-201, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 5 BASIC

Gene PTPN3, Length 6,832 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-201ENST00000262539 EEF1AKMT3Q96AZ1 226 aa6.9□□□□□ -1.31
PTPN3-201ENST00000262539 TMEM204Q9BSN7 226 aa6.9□□□□□ -1.31
PTPN3-201ENST00000262539 MAP1LC3BQ9GZQ8 125 aa6.9□□□□□ -1.31
PTPN3-201ENST00000262539 GSX1Q9H4S2 264 aaPredicted RBP6.9□□□□□ -1.31
PTPN3-201ENST00000262539 IGHV1-69-2A0A0G2JMI3 117 aa6.9□□□□□ -1.31
PTPN3-201ENST00000262539 MED19A0JLT2 244 aaPredicted RBP6.9□□□□□ -1.31
PTPN3-201ENST00000262539 B4DEV8 164 aa6.9□□□□□ -1.31
PTPN3-201ENST00000262539 WISP1O95388 367 aa6.9□□□□□ -1.31
PTPN3-201ENST00000262539 MAS1LP35410 378 aa6.9□□□□□ -1.31
PTPN3-201ENST00000262539 FAM74A3Q4VXF1 159 aa6.9□□□□□ -1.31
PTPN3-201ENST00000262539 PUSL1Q8N0Z8 303 aaKnown RBP6.9□□□□□ -1.31
PTPN3-201ENST00000262539 OR10C1Q96KK4 312 aa6.9□□□□□ -1.31
PTPN3-201ENST00000262539 VGLL1Q99990 258 aa6.9□□□□□ -1.31
PTPN3-201ENST00000262539 KIF26BQ2KJY2 2108 aa6.89□□□□□ -1.31
PTPN3-201ENST00000262539 FNDC10F2Z333 226 aa6.89□□□□□ -1.31
PTPN3-201ENST00000262539 FREM3P0C091 2139 aa6.89□□□□□ -1.31
PTPN3-201ENST00000262539 PSG2P11465 335 aa6.89□□□□□ -1.31
PTPN3-201ENST00000262539 CXCL2P19875 107 aa6.89□□□□□ -1.31
PTPN3-201ENST00000262539 NPBWR2P48146 333 aa6.89□□□□□ -1.31
PTPN3-201ENST00000262539 HSPE1P61604 102 aaKnown RBP6.89□□□□□ -1.31
PTPN3-201ENST00000262539 TMEM155Q4W5P6 130 aa6.89□□□□□ -1.31
PTPN3-201ENST00000262539 ZNF474Q6S9Z5 364 aaPredicted RBP6.89□□□□□ -1.31
PTPN3-201ENST00000262539 OR4C13Q8NGP0 309 aa6.89□□□□□ -1.31
PTPN3-201ENST00000262539 CBY3A6NI87 242 aa6.89□□□□□ -1.31
PTPN3-201ENST00000262539 FOXG1P55316 489 aaPredicted RBP6.89□□□□□ -1.31
PTPN3-201ENST00000262539 POU2AF1Q16633 256 aa6.89□□□□□ -1.31
PTPN3-201ENST00000262539 STPG3Q8N7X2 389 aa6.89□□□□□ -1.31
PTPN3-201ENST00000262539 NEU1Q99519 415 aa6.89□□□□□ -1.31
PTPN3-201ENST00000262539 KBTBD11O94819 623 aa6.89□□□□□ -1.31
PTPN3-201ENST00000262539 BTF3P20290 206 aaKnown RBP6.89□□□□□ -1.31
PTPN3-201ENST00000262539 TCTAP57738 103 aa6.89□□□□□ -1.31
PTPN3-201ENST00000262539 HEPN1Q6WQI6 88 aa6.89□□□□□ -1.31
PTPN3-201ENST00000262539 SELENOHQ8IZQ5 122 aaKnown RBP6.89□□□□□ -1.31
PTPN3-201ENST00000262539 DOCK9Q9BZ29 2069 aa6.89□□□□□ -1.31
PTPN3-201ENST00000262539 J3QR06 171 aa6.89□□□□□ -1.31
PTPN3-201ENST00000262539 NTF4P34130 210 aa6.89□□□□□ -1.31
PTPN3-201ENST00000262539 SUPT4H1P63272 117 aaKnown RBP6.89□□□□□ -1.31
PTPN3-201ENST00000262539 ZNF56Q15929 161 aa6.89□□□□□ -1.31
PTPN3-201ENST00000262539 NMSQ5H8A3 153 aa6.89□□□□□ -1.31
PTPN3-201ENST00000262539 GTSCR1Q86UQ5 136 aa6.89□□□□□ -1.31
PTPN3-201ENST00000262539 LINC00311Q8N616 119 aa6.89□□□□□ -1.31
PTPN3-201ENST00000262539 TMEM106BQ9NUM4 274 aa6.89□□□□□ -1.31
PTPN3-201ENST00000262539 CEP295Q9C0D2 2601 aa6.89□□□□□ -1.31
PTPN3-201ENST00000262539 TRAV1-1A0A0B4J248 108 aa6.89□□□□□ -1.31
PTPN3-201ENST00000262539 TSPOP30536 169 aa6.89□□□□□ -1.31
PTPN3-201ENST00000262539 HCP5Q6MZN7 132 aa6.89□□□□□ -1.31
PTPN3-201ENST00000262539 LYZL2Q7Z4W2 148 aa6.89□□□□□ -1.31
PTPN3-201ENST00000262539 DRAM1Q8N682 238 aa6.89□□□□□ -1.31
PTPN3-201ENST00000262539 ZNF502Q8TBZ5 544 aa6.89□□□□□ -1.31
PTPN3-201ENST00000262539 RAB37Q96AX2 223 aa6.89□□□□□ -1.31
PTPN3-201ENST00000262539 IGHV3-23P01764 117 aa6.88□□□□□ -1.31
PTPN3-201ENST00000262539 CCKARP32238 428 aa6.88□□□□□ -1.31
PTPN3-201ENST00000262539 RPL27AP46776 148 aaKnown RBP6.88□□□□□ -1.31
PTPN3-201ENST00000262539 TMEM101Q96IK0 257 aa6.88□□□□□ -1.31
PTPN3-201ENST00000262539 SEC11CQ9BY50 192 aa6.88□□□□□ -1.31
PTPN3-201ENST00000262539 SCTP09683 121 aa6.88□□□□□ -1.31
PTPN3-201ENST00000262539 DLK1P80370 383 aa6.88□□□□□ -1.31
PTPN3-201ENST00000262539 MEIG1Q5JSS6 88 aa6.88□□□□□ -1.31
PTPN3-201ENST00000262539 FAM74A4Q5TZK3 123 aa6.88□□□□□ -1.31
PTPN3-201ENST00000262539 C18orf12Q96KH6 178 aa6.88□□□□□ -1.31
PTPN3-201ENST00000262539 ZNF488Q96MN9 340 aa6.88□□□□□ -1.31
PTPN3-201ENST00000262539 MAP1LC3CQ9BXW4 147 aa6.88□□□□□ -1.31
PTPN3-201ENST00000262539 CTXND1A0A1B0GTU2 59 aa6.88□□□□□ -1.31
PTPN3-201ENST00000262539 TMEM189A5PLL7 270 aa6.88□□□□□ -1.31
PTPN3-201ENST00000262539 TEX36Q5VZQ5 186 aa6.88□□□□□ -1.31
PTPN3-201ENST00000262539 TPRX1Q8N7U7 411 aa6.88□□□□□ -1.31
PTPN3-201ENST00000262539 CACNG8Q8WXS5 425 aa6.88□□□□□ -1.31
PTPN3-201ENST00000262539 NKX2-6A6NCS4 301 aa6.88□□□□□ -1.31
PTPN3-201ENST00000262539 NCMAPQ5T1S8 102 aa6.88□□□□□ -1.31
PTPN3-201ENST00000262539 RELL2Q8NC24 303 aaPredicted RBP6.88□□□□□ -1.31
PTPN3-201ENST00000262539 OR13C6PQ8NH95 151 aa6.88□□□□□ -1.31
PTPN3-201ENST00000262539 DYRK2Q92630 601 aa6.88□□□□□ -1.31
PTPN3-201ENST00000262539 A0A1B0GW64 132 aa6.88□□□□□ -1.31
PTPN3-201ENST00000262539 TMEM250H0YL14 139 aa6.88□□□□□ -1.31
PTPN3-201ENST00000262539 GPX1P07203 203 aa6.88□□□□□ -1.31
PTPN3-201ENST00000262539 RELQ04864 619 aaPredicted RBP6.88□□□□□ -1.31
PTPN3-201ENST00000262539 PMS2P11Q13670 270 aa6.88□□□□□ -1.31
PTPN3-201ENST00000262539 TMEM241Q24JQ0 296 aa6.88□□□□□ -1.31
PTPN3-201ENST00000262539 IGSF11Q5DX21 431 aa6.88□□□□□ -1.31
PTPN3-201ENST00000262539 ADAD2Q8NCV1 583 aaKnown RBP6.88□□□□□ -1.31
PTPN3-201ENST00000262539 OR4D5Q8NGN0 318 aa6.88□□□□□ -1.31
PTPN3-201ENST00000262539 PHLDA3Q9Y5J5 127 aa6.88□□□□□ -1.31
PTPN3-201ENST00000262539 PTPRQQ9UMZ3 2332 aa6.88□□□□□ -1.31
PTPN3-201ENST00000262539 TCRBV4S1A1TA0A5B7 111 aa6.87□□□□□ -1.31
PTPN3-201ENST00000262539 SNURFLB1AK76 121 aa6.87□□□□□ -1.31
PTPN3-201ENST00000262539 TRGV3P03979 118 aa6.87□□□□□ -1.31
PTPN3-201ENST00000262539 SNRPCP09234 159 aaKnown RBP6.87□□□□□ -1.31
PTPN3-201ENST00000262539 PNKDQ8N490 385 aa6.87□□□□□ -1.31
PTPN3-201ENST00000262539 SSBP3Q9BWW4 388 aaPredicted RBP6.87□□□□□ -1.31
PTPN3-201ENST00000262539 NCOR2Q9Y618 2525 aa6.87□□□□□ -1.31
PTPN3-201ENST00000262539 HDHD3Q9BSH5 251 aaPredicted RBP6.87□□□□□ -1.31
PTPN3-201ENST00000262539 C7orf69Q9H7B7 122 aa6.87□□□□□ -1.31
PTPN3-201ENST00000262539 HSPB7Q9UBY9 170 aa6.87□□□□□ -1.31
PTPN3-201ENST00000262539 ERVH48-1M5A8F1 160 aa6.87□□□□□ -1.31
PTPN3-201ENST00000262539 C20orf204Q6ZNR8 217 aa6.87□□□□□ -1.31
PTPN3-201ENST00000262539 FGFRL1Q8N441 504 aa6.87□□□□□ -1.31
PTPN3-201ENST00000262539 COL25A1Q9BXS0 654 aaPredicted RBP6.87□□□□□ -1.31
PTPN3-201ENST00000262539 PSMB11A5LHX3 300 aa6.87□□□□□ -1.31
PTPN3-201ENST00000262539 HYPMO75409 117 aa6.87□□□□□ -1.31
PTPN3-201ENST00000262539 FCGR2BP31994 310 aaPredicted RBP6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms