RNA–Protein interactions for RNA: ENST00000262396.10

TRAF4-202, Transcript of TNF receptor associated factor 4, humanhuman

TSL 1 (best) BASIC

Gene TRAF4, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-202ENST00000262396 LINC00322Q6ZN03 302 aaPredicted RBP9.2□□□□□ -0.94
TRAF4-202ENST00000262396 ZNF818PQ6ZRF7 136 aa9.2□□□□□ -0.94
TRAF4-202ENST00000262396 CROCCP3Q8IVE0 287 aa9.2□□□□□ -0.94
TRAF4-202ENST00000262396 GIMAP1Q8WWP7 306 aa9.2□□□□□ -0.94
TRAF4-202ENST00000262396 ZNF2Q9BSG1 426 aaPredicted RBP9.2□□□□□ -0.94
TRAF4-202ENST00000262396 C6orf62Q9GZU0 229 aaPredicted RBP9.2□□□□□ -0.94
TRAF4-202ENST00000262396 RNF167Q9H6Y7 350 aa9.2□□□□□ -0.94
TRAF4-202ENST00000262396 PLEKHA2Q9HB19 425 aa9.2□□□□□ -0.94
TRAF4-202ENST00000262396 VCX3AQ9NNX9 186 aa9.2□□□□□ -0.94
TRAF4-202ENST00000262396 COMMD9Q9P000 198 aa9.2□□□□□ -0.94
TRAF4-202ENST00000262396 IGHV3-21A0A0B4J1V1 117 aa9.19□□□□□ -0.94
TRAF4-202ENST00000262396 TRAV3A0A0B4J244 114 aa9.19□□□□□ -0.94
TRAF4-202ENST00000262396 TGOLN2O43493 480 aa9.19□□□□□ -0.94
TRAF4-202ENST00000262396 YIF1AO95070 293 aa9.19□□□□□ -0.94
TRAF4-202ENST00000262396 KRASP01116 189 aa9.19□□□□□ -0.94
TRAF4-202ENST00000262396 PMP2P02689 132 aa9.19□□□□□ -0.94
TRAF4-202ENST00000262396 ELLP55199 621 aaPredicted RBP9.19□□□□□ -0.94
TRAF4-202ENST00000262396 BRWD1-AS2P59051 145 aa9.19□□□□□ -0.94
TRAF4-202ENST00000262396 TAS2R46P59540 309 aa9.19□□□□□ -0.94
TRAF4-202ENST00000262396 TSPAN5P62079 268 aa9.19□□□□□ -0.94
TRAF4-202ENST00000262396 UNQ9165/PRO28630Q6UXU0 137 aa9.19□□□□□ -0.94
TRAF4-202ENST00000262396 GDPD1Q8N9F7 314 aa9.19□□□□□ -0.94
TRAF4-202ENST00000262396 OR10W1Q8NGF6 305 aa9.19□□□□□ -0.94
TRAF4-202ENST00000262396 ZNF502Q8TBZ5 544 aa9.19□□□□□ -0.94
TRAF4-202ENST00000262396 VN1R17PQ8TDU5 208 aa9.19□□□□□ -0.94
TRAF4-202ENST00000262396 SLC25A38Q96DW6 304 aa9.19□□□□□ -0.94
TRAF4-202ENST00000262396 TMEM56Q96MV1 263 aa9.19□□□□□ -0.94
TRAF4-202ENST00000262396 FKBP11Q9NYL4 201 aa9.19□□□□□ -0.94
TRAF4-202ENST00000262396 UBQLN2Q9UHD9 624 aa9.19□□□□□ -0.94
TRAF4-202ENST00000262396 OR51B2Q9Y5P1 312 aa9.19□□□□□ -0.94
TRAF4-202ENST00000262396 DMRT1Q9Y5R6 373 aa9.19□□□□□ -0.94
TRAF4-202ENST00000262396 DYNC2H1Q8NCM8 4307 aaKnown RBP9.18□□□□□ -0.94
TRAF4-202ENST00000262396 RYR2Q92736 4967 aa9.18□□□□□ -0.94
TRAF4-202ENST00000262396 SMIM31A0A1B0GVY4 71 aa9.18□□□□□ -0.94
TRAF4-202ENST00000262396 A0A1B0GW64 132 aa9.18□□□□□ -0.94
TRAF4-202ENST00000262396 IGLC7A0M8Q6 106 aa9.18□□□□□ -0.94
TRAF4-202ENST00000262396 OR4C46A6NHA9 309 aa9.18□□□□□ -0.94
TRAF4-202ENST00000262396 MARCH11A6NNE9 402 aa9.18□□□□□ -0.94
TRAF4-202ENST00000262396 XRCC3O43542 346 aa9.18□□□□□ -0.94
TRAF4-202ENST00000262396 TMEM127O75204 238 aa9.18□□□□□ -0.94
TRAF4-202ENST00000262396 F2RP25116 425 aa9.18□□□□□ -0.94
TRAF4-202ENST00000262396 LPAR6P43657 344 aa9.18□□□□□ -0.94
TRAF4-202ENST00000262396 RFX2P48378 723 aa9.18□□□□□ -0.94
TRAF4-202ENST00000262396 UBE2NLQ5JXB2 153 aa9.18□□□□□ -0.94
TRAF4-202ENST00000262396 STPG3Q8N7X2 389 aa9.18□□□□□ -0.94
TRAF4-202ENST00000262396 OR6F1Q8NGZ6 308 aa9.18□□□□□ -0.94
TRAF4-202ENST00000262396 LSM10Q969L4 123 aaKnown RBP9.18□□□□□ -0.94
TRAF4-202ENST00000262396 BSCL2Q96G97 398 aaPredicted RBP9.18□□□□□ -0.94
TRAF4-202ENST00000262396 CMTM3Q96MX0 182 aa9.18□□□□□ -0.94
TRAF4-202ENST00000262396 TSC22D3Q99576 134 aa9.18□□□□□ -0.94
TRAF4-202ENST00000262396 SPAG8Q99932 426 aaPredicted RBP9.18□□□□□ -0.94
TRAF4-202ENST00000262396 DAZ1Q9NQZ3 744 aaKnown RBP9.18□□□□□ -0.94
TRAF4-202ENST00000262396 C21orf62Q9NYP8 219 aa9.18□□□□□ -0.94
TRAF4-202ENST00000262396 TEX50A0A1B0GTY4 177 aa9.17□□□□□ -0.94
TRAF4-202ENST00000262396 NUPL2O15504 423 aaKnown RBP9.17□□□□□ -0.94
TRAF4-202ENST00000262396 LY6G6CO95867 125 aa9.17□□□□□ -0.94
TRAF4-202ENST00000262396 EIF4EP06730 217 aaKnown RBP9.17□□□□□ -0.94
TRAF4-202ENST00000262396 SERPINE2P07093 398 aa9.17□□□□□ -0.94
TRAF4-202ENST00000262396 PRSS3P35030 304 aa9.17□□□□□ -0.94
TRAF4-202ENST00000262396 G6PCP35575 357 aa9.17□□□□□ -0.94
TRAF4-202ENST00000262396 LPCAT3Q6P1A2 487 aa9.17□□□□□ -0.94
TRAF4-202ENST00000262396 SPSB3Q6PJ21 355 aa9.17□□□□□ -0.94
TRAF4-202ENST00000262396 TMEM217Q8N7C4 229 aa9.17□□□□□ -0.94
TRAF4-202ENST00000262396 SAMD12Q8N8I0 201 aa9.17□□□□□ -0.94
TRAF4-202ENST00000262396 OR4A16Q8NH70 328 aa9.17□□□□□ -0.94
TRAF4-202ENST00000262396 DGCR14Q96DF8 476 aaKnown RBP9.17□□□□□ -0.94
TRAF4-202ENST00000262396 C5orf66Q9H5L9 145 aa9.17□□□□□ -0.94
TRAF4-202ENST00000262396 PRNDQ9UKY0 176 aa9.17□□□□□ -0.94
TRAF4-202ENST00000262396 NSG2Q9Y328 171 aa9.17□□□□□ -0.94
TRAF4-202ENST00000262396 CGB1A6NKQ9 187 aa9.16□□□□□ -0.94
TRAF4-202ENST00000262396 GPR31O00270 319 aa9.16□□□□□ -0.94
TRAF4-202ENST00000262396 UBE2CO00762 179 aa9.16□□□□□ -0.94
TRAF4-202ENST00000262396 SPRY2O43597 315 aa9.16□□□□□ -0.94
TRAF4-202ENST00000262396 ZNF207O43670 478 aaKnown RBP9.16□□□□□ -0.94
TRAF4-202ENST00000262396 PGLYRP1O75594 196 aaPredicted RBP9.16□□□□□ -0.94
TRAF4-202ENST00000262396 RPL35AP18077 110 aaKnown RBP9.16□□□□□ -0.94
TRAF4-202ENST00000262396 GNRHRP30968 328 aa9.16□□□□□ -0.94
TRAF4-202ENST00000262396 BMI1P35226 326 aa9.16□□□□□ -0.94
TRAF4-202ENST00000262396 TAS2R20P59543 309 aa9.16□□□□□ -0.94
TRAF4-202ENST00000262396 LSM3P62310 102 aaKnown RBP9.16□□□□□ -0.94
TRAF4-202ENST00000262396 RELQ04864 619 aaPredicted RBP9.16□□□□□ -0.94
TRAF4-202ENST00000262396 POU2AF1Q16633 256 aa9.16□□□□□ -0.94
TRAF4-202ENST00000262396 PHLDA2Q53GA4 152 aa9.16□□□□□ -0.94
TRAF4-202ENST00000262396 TMEM190Q8WZ59 177 aa9.16□□□□□ -0.94
TRAF4-202ENST00000262396 MISP3Q96FF7 219 aa9.16□□□□□ -0.94
TRAF4-202ENST00000262396 OVOL2Q9BRP0 275 aa9.16□□□□□ -0.94
TRAF4-202ENST00000262396 F11RQ9Y624 299 aaKnown RBP9.16□□□□□ -0.94
TRAF4-202ENST00000262396 IGKV3-7A0A075B6H7 116 aa9.15□□□□□ -0.94
TRAF4-202ENST00000262396 IGHV3OR16-8A0A075B7F1 116 aa9.15□□□□□ -0.94
TRAF4-202ENST00000262396 A0A0J9YWU9 116 aa9.15□□□□□ -0.94
TRAF4-202ENST00000262396 NUPR2A6NF83 97 aa9.15□□□□□ -0.94
TRAF4-202ENST00000262396 NDUFA4O00483 81 aa9.15□□□□□ -0.94
TRAF4-202ENST00000262396 FGF2P09038 288 aa9.15□□□□□ -0.94
TRAF4-202ENST00000262396 HLA-DMAP28067 261 aa9.15□□□□□ -0.94
TRAF4-202ENST00000262396 TFPI2P48307 235 aa9.15□□□□□ -0.94
TRAF4-202ENST00000262396 DEFB135Q30KP9 77 aa9.15□□□□□ -0.94
TRAF4-202ENST00000262396 H2BFWTQ7Z2G1 175 aa9.15□□□□□ -0.94
TRAF4-202ENST00000262396 OR5B3Q8NH48 314 aa9.15□□□□□ -0.94
TRAF4-202ENST00000262396 FCAMRQ8WWV6 532 aa9.15□□□□□ -0.94
TRAF4-202ENST00000262396 MOB3AQ96BX8 217 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms