RNA–Protein interactions for RNA: ENST00000261897.5

PRPF40B-201, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-201ENST00000261897 TAAR6Q96RI8 345 aa13.28□□□□□ -0.28
PRPF40B-201ENST00000261897 GP6Q9HCN6 339 aa13.28□□□□□ -0.28
PRPF40B-201ENST00000261897 IL19Q9UHD0 177 aa13.28□□□□□ -0.28
PRPF40B-201ENST00000261897 A0A1W2PRD5 423 aa13.28□□□□□ -0.28
PRPF40B-201ENST00000261897 A0A1W2PRF3 423 aa13.28□□□□□ -0.28
PRPF40B-201ENST00000261897 A0A1W2PRM7 423 aa13.28□□□□□ -0.28
PRPF40B-201ENST00000261897 LINC00473A8K010 186 aa13.28□□□□□ -0.28
PRPF40B-201ENST00000261897 PSPNO60542 156 aa13.28□□□□□ -0.28
PRPF40B-201ENST00000261897 CYB561P49447 251 aa13.28□□□□□ -0.28
PRPF40B-201ENST00000261897 LGALS4P56470 323 aa13.28□□□□□ -0.28
PRPF40B-201ENST00000261897 TMEM144Q7Z5S9 345 aa13.28□□□□□ -0.28
PRPF40B-201ENST00000261897 ZNF645Q8N7E2 425 aa13.28□□□□□ -0.28
PRPF40B-201ENST00000261897 DEFB127Q9H1M4 99 aa13.28□□□□□ -0.28
PRPF40B-201ENST00000261897 J3QT63 122 aa13.27□□□□□ -0.28
PRPF40B-201ENST00000261897 HOXC12P31275 282 aa13.27□□□□□ -0.28
PRPF40B-201ENST00000261897 NXPH1P58417 271 aa13.27□□□□□ -0.28
PRPF40B-201ENST00000261897 SLAQ13239 276 aa13.27□□□□□ -0.28
PRPF40B-201ENST00000261897 OCIAD2Q56VL3 154 aa13.27□□□□□ -0.28
PRPF40B-201ENST00000261897 SLC25A34Q6PIV7 304 aa13.27□□□□□ -0.28
PRPF40B-201ENST00000261897 FAM173AQ9BQD7 235 aa13.27□□□□□ -0.28
PRPF40B-201ENST00000261897 IGHV2OR16-5A0A0B4J2B6 119 aa13.27□□□□□ -0.29
PRPF40B-201ENST00000261897 MLNRO43193 412 aa13.27□□□□□ -0.29
PRPF40B-201ENST00000261897 SAP30O75446 220 aa13.27□□□□□ -0.29
PRPF40B-201ENST00000261897 HLA-DQA1P01909 254 aa13.27□□□□□ -0.29
PRPF40B-201ENST00000261897 AMY1AP04745 511 aa13.27□□□□□ -0.29
PRPF40B-201ENST00000261897 EFNB3Q15768 340 aa13.27□□□□□ -0.29
PRPF40B-201ENST00000261897 SLC25A53Q5H9E4 307 aa13.27□□□□□ -0.29
PRPF40B-201ENST00000261897 SPSB4Q96A44 273 aa13.27□□□□□ -0.29
PRPF40B-201ENST00000261897 TRAV9-2A0A087WT02 112 aa13.27□□□□□ -0.29
PRPF40B-201ENST00000261897 GNG7O60262 68 aa13.27□□□□□ -0.29
PRPF40B-201ENST00000261897 MLANAQ16655 118 aa13.27□□□□□ -0.29
PRPF40B-201ENST00000261897 TCF24Q7RTU0 167 aa13.27□□□□□ -0.29
PRPF40B-201ENST00000261897 NUDT10Q8NFP7 164 aa13.27□□□□□ -0.29
PRPF40B-201ENST00000261897 CORO2AQ92828 525 aa13.27□□□□□ -0.29
PRPF40B-201ENST00000261897 MGST2Q99735 147 aa13.27□□□□□ -0.29
PRPF40B-201ENST00000261897 GGTLC1Q9BX51 225 aa13.27□□□□□ -0.29
PRPF40B-201ENST00000261897 TMEM131Q92545 1883 aa13.27□□□□□ -0.29
PRPF40B-201ENST00000261897 C15orf62A8K5M9 175 aa13.26□□□□□ -0.29
PRPF40B-201ENST00000261897 ASCL4Q6XD76 172 aa13.26□□□□□ -0.29
PRPF40B-201ENST00000261897 OR8A1Q8NGG7 326 aa13.26□□□□□ -0.29
PRPF40B-201ENST00000261897 GSX1Q9H4S2 264 aaPredicted RBP13.26□□□□□ -0.29
PRPF40B-201ENST00000261897 WDR83OSQ9Y284 106 aa13.26□□□□□ -0.29
PRPF40B-201ENST00000261897 ZNF835Q9Y2P0 537 aa13.26□□□□□ -0.29
PRPF40B-201ENST00000261897 TRANK1O15050 2925 aa13.26□□□□□ -0.29
PRPF40B-201ENST00000261897 IGHV3OR15-7A0A075B7D8 119 aa13.26□□□□□ -0.29
PRPF40B-201ENST00000261897 C5orf67F2Z3F1 127 aa13.26□□□□□ -0.29
PRPF40B-201ENST00000261897 LEPROTL1O95214 131 aa13.26□□□□□ -0.29
PRPF40B-201ENST00000261897 YPEL3P61236 119 aaPredicted RBP13.26□□□□□ -0.29
PRPF40B-201ENST00000261897 PGLYRP4Q96LB8 373 aa13.26□□□□□ -0.29
PRPF40B-201ENST00000261897 NPVFQ9HCQ7 196 aa13.26□□□□□ -0.29
PRPF40B-201ENST00000261897 SPTAN1Q13813 2472 aaKnown RBP13.26□□□□□ -0.29
PRPF40B-201ENST00000261897 TANC2Q9HCD6 1990 aa13.26□□□□□ -0.29
PRPF40B-201ENST00000261897 ZGRF1Q86YA3 2104 aa13.26□□□□□ -0.29
PRPF40B-201ENST00000261897 ZNF503-AS2A6NEH8 195 aa13.26□□□□□ -0.29
PRPF40B-201ENST00000261897 BPIFB3P59826 476 aa13.26□□□□□ -0.29
PRPF40B-201ENST00000261897 MRPL49Q13405 166 aaKnown RBP13.26□□□□□ -0.29
PRPF40B-201ENST00000261897 FAM168AQ92567 244 aa13.26□□□□□ -0.29
PRPF40B-201ENST00000261897 ZPBPQ9BS86 351 aa13.26□□□□□ -0.29
PRPF40B-201ENST00000261897 F11RQ9Y624 299 aaKnown RBP13.26□□□□□ -0.29
PRPF40B-201ENST00000261897 TRAV5A0A0B4J249 113 aa13.25□□□□□ -0.29
PRPF40B-201ENST00000261897 A0A1W2PQM1 296 aa13.25□□□□□ -0.29
PRPF40B-201ENST00000261897 GAGE12BA1L429 117 aa13.25□□□□□ -0.29
PRPF40B-201ENST00000261897 CORTO00230 105 aa13.25□□□□□ -0.29
PRPF40B-201ENST00000261897 ITGB1BP1O14713 200 aa13.25□□□□□ -0.29
PRPF40B-201ENST00000261897 FADS6Q8N9I5 356 aa13.25□□□□□ -0.29
PRPF40B-201ENST00000261897 RND1Q92730 232 aa13.25□□□□□ -0.29
PRPF40B-201ENST00000261897 CLEC1BQ9P126 229 aa13.25□□□□□ -0.29
PRPF40B-201ENST00000261897 LOC389332A0A1B0GUA5 103 aa13.25□□□□□ -0.29
PRPF40B-201ENST00000261897 FAM90A26D6RGX4 464 aa13.25□□□□□ -0.29
PRPF40B-201ENST00000261897 MT-ND6P03923 174 aa13.25□□□□□ -0.29
PRPF40B-201ENST00000261897 CELA3BP08861 270 aa13.25□□□□□ -0.29
PRPF40B-201ENST00000261897 KIR3DL3Q8N743 410 aa13.25□□□□□ -0.29
PRPF40B-201ENST00000261897 C1QTNF5Q9BXJ0 243 aa13.25□□□□□ -0.29
PRPF40B-201ENST00000261897 IGHV5-10-1A0A0J9YXX1 117 aa13.25□□□□□ -0.29
PRPF40B-201ENST00000261897 ORM2P19652 201 aa13.25□□□□□ -0.29
PRPF40B-201ENST00000261897 MOB1BQ7L9L4 216 aa13.25□□□□□ -0.29
PRPF40B-201ENST00000261897 MDP1Q86V88 176 aa13.25□□□□□ -0.29
PRPF40B-201ENST00000261897 RBMXL3Q8N7X1 1067 aaKnown RBP13.25□□□□□ -0.29
PRPF40B-201ENST00000261897 TMEM70Q9BUB7 260 aa13.25□□□□□ -0.29
PRPF40B-201ENST00000261897 LOC105371242A0A075B767 164 aa13.24□□□□□ -0.29
PRPF40B-201ENST00000261897 SERTM2A0A1B0GWG4 89 aa13.24□□□□□ -0.29
PRPF40B-201ENST00000261897 NHLH1Q02575 133 aa13.24□□□□□ -0.29
PRPF40B-201ENST00000261897 C1orf185Q5T7R7 199 aa13.24□□□□□ -0.29
PRPF40B-201ENST00000261897 NABP2Q9BQ15 211 aa13.24□□□□□ -0.29
PRPF40B-201ENST00000261897 SF3B5Q9BWJ5 86 aaKnown RBP13.24□□□□□ -0.29
PRPF40B-201ENST00000261897 FAM90A10PA6NDY2 464 aa13.24□□□□□ -0.29
PRPF40B-201ENST00000261897 FAM90A18PA6NE21 464 aa13.24□□□□□ -0.29
PRPF40B-201ENST00000261897 FAM90A16PA6NEW6 464 aa13.24□□□□□ -0.29
PRPF40B-201ENST00000261897 FAM90A20PA6NIJ5 464 aa13.24□□□□□ -0.29
PRPF40B-201ENST00000261897 FAM90A8PA6NJQ4 464 aa13.24□□□□□ -0.29
PRPF40B-201ENST00000261897 FAM90A7PA6NKC0 464 aa13.24□□□□□ -0.29
PRPF40B-201ENST00000261897 ZNF716A6NP11 495 aa13.24□□□□□ -0.29
PRPF40B-201ENST00000261897 FAM90A22PA8MWA6 464 aa13.24□□□□□ -0.29
PRPF40B-201ENST00000261897 FAM90A12PA8MX19 464 aa13.24□□□□□ -0.29
PRPF40B-201ENST00000261897 FAM90A5PA8MXJ8 464 aa13.24□□□□□ -0.29
PRPF40B-201ENST00000261897 FAM90A23PA8MXZ1 464 aa13.24□□□□□ -0.29
PRPF40B-201ENST00000261897 AGFG2O95081 481 aa13.24□□□□□ -0.29
PRPF40B-201ENST00000261897 FAM90A15PP0C7V4 464 aa13.24□□□□□ -0.29
PRPF40B-201ENST00000261897 FAM90A13PP0C7W8 464 aa13.24□□□□□ -0.29
PRPF40B-201ENST00000261897 FAM90A14PP0C7W9 464 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms