RNA–Protein interactions for RNA: ENST00000261443.9

CSDE1-201, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-201ENST00000261443 RARRES3Q9UL19 164 aa5.99□□□□□ -1.45
CSDE1-201ENST00000261443 IGLV3-12A0A075B6K2 115 aa5.99□□□□□ -1.45
CSDE1-201ENST00000261443 NDUFS8O00217 210 aa5.99□□□□□ -1.45
CSDE1-201ENST00000261443 DUX1O43812 170 aa5.99□□□□□ -1.45
CSDE1-201ENST00000261443 DKK1O94907 266 aa5.99□□□□□ -1.45
CSDE1-201ENST00000261443 OR2H2O95918 312 aa5.99□□□□□ -1.45
CSDE1-201ENST00000261443 BMI1P35226 326 aa5.99□□□□□ -1.45
CSDE1-201ENST00000261443 RAC3P60763 192 aa5.99□□□□□ -1.45
CSDE1-201ENST00000261443 PSG5Q15238 335 aa5.99□□□□□ -1.45
CSDE1-201ENST00000261443 GABRA6Q16445 453 aa5.99□□□□□ -1.45
CSDE1-201ENST00000261443 PET117Q6UWS5 81 aa5.99□□□□□ -1.45
CSDE1-201ENST00000261443 GTF2H5Q6ZYL4 71 aa5.99□□□□□ -1.45
CSDE1-201ENST00000261443 DEFB119Q8N690 84 aa5.99□□□□□ -1.45
CSDE1-201ENST00000261443 SSBP3Q9BWW4 388 aaPredicted RBP5.99□□□□□ -1.45
CSDE1-201ENST00000261443 GJE1A6NN92 205 aa5.99□□□□□ -1.45
CSDE1-201ENST00000261443 ANKRD30BLA7E2S9 258 aa5.99□□□□□ -1.45
CSDE1-201ENST00000261443 ACTL6BO94805 426 aa5.99□□□□□ -1.45
CSDE1-201ENST00000261443 TNFSF15O95150 251 aa5.99□□□□□ -1.45
CSDE1-201ENST00000261443 APOBEC3AP31941 199 aaPredicted RBP5.99□□□□□ -1.45
CSDE1-201ENST00000261443 GNG3P63215 75 aa5.99□□□□□ -1.45
CSDE1-201ENST00000261443 HIST1H1AQ02539 215 aaPredicted RBP5.99□□□□□ -1.45
CSDE1-201ENST00000261443 FAM53AQ6NSI3 398 aaPredicted RBP5.99□□□□□ -1.45
CSDE1-201ENST00000261443 RASL11AQ6T310 242 aa5.99□□□□□ -1.45
CSDE1-201ENST00000261443 STPG3Q8N7X2 389 aa5.99□□□□□ -1.45
CSDE1-201ENST00000261443 FAM168AQ92567 244 aa5.99□□□□□ -1.45
CSDE1-201ENST00000261443 TMEM186Q96B77 213 aa5.99□□□□□ -1.45
CSDE1-201ENST00000261443 GALMQ96C23 342 aa5.99□□□□□ -1.45
CSDE1-201ENST00000261443 AP1S3Q96PC3 154 aa5.99□□□□□ -1.45
CSDE1-201ENST00000261443 TAAR6Q96RI8 345 aa5.99□□□□□ -1.45
CSDE1-201ENST00000261443 TMEM191AQ9H0A3 160 aa5.99□□□□□ -1.45
CSDE1-201ENST00000261443 FNDC4Q9H6D8 234 aaPredicted RBP5.99□□□□□ -1.45
CSDE1-201ENST00000261443 SH2D2AQ9NP31 389 aa5.99□□□□□ -1.45
CSDE1-201ENST00000261443 KCNIP1Q9NZI2 227 aa5.99□□□□□ -1.45
CSDE1-201ENST00000261443 SELENOKQ9Y6D0 94 aa5.99□□□□□ -1.45
CSDE1-201ENST00000261443 ADAMTS20P59510 1910 aa5.98□□□□□ -1.45
CSDE1-201ENST00000261443 TNRC6AQ8NDV7 1962 aaKnown RBP5.98□□□□□ -1.45
CSDE1-201ENST00000261443 TMEM238LA0A1B0GVL6 79 aa5.98□□□□□ -1.45
CSDE1-201ENST00000261443 FAM231BA6NCW3 169 aa5.98□□□□□ -1.45
CSDE1-201ENST00000261443 SH2D7A6NKC9 451 aaPredicted RBP5.98□□□□□ -1.45
CSDE1-201ENST00000261443 SYS1-DBNDD2H3BUS1 97 aa5.98□□□□□ -1.45
CSDE1-201ENST00000261443 CCL3P10147 92 aa5.98□□□□□ -1.45
CSDE1-201ENST00000261443 LINC00205P59089 165 aa5.98□□□□□ -1.45
CSDE1-201ENST00000261443 RBPJQ06330 500 aa5.98□□□□□ -1.45
CSDE1-201ENST00000261443 SAMD13Q5VXD3 122 aa5.98□□□□□ -1.45
CSDE1-201ENST00000261443 WIPF2Q8TF74 440 aaPredicted RBP5.98□□□□□ -1.45
CSDE1-201ENST00000261443 TRIB1Q96RU8 372 aa5.98□□□□□ -1.45
CSDE1-201ENST00000261443 SSBP4Q9BWG4 385 aaPredicted RBP5.98□□□□□ -1.45
CSDE1-201ENST00000261443 WDR54Q9H977 334 aa5.98□□□□□ -1.45
CSDE1-201ENST00000261443 NPVFQ9HCQ7 196 aa5.98□□□□□ -1.45
CSDE1-201ENST00000261443 SCRT2Q9NQ03 307 aa5.98□□□□□ -1.45
CSDE1-201ENST00000261443 MBNL3Q9NUK0 354 aaKnown RBP5.98□□□□□ -1.45
CSDE1-201ENST00000261443 TRIOBPQ9H2D6 2365 aa5.98□□□□□ -1.45
CSDE1-201ENST00000261443 TMEM265A0A087WTH1 108 aa5.98□□□□□ -1.45
CSDE1-201ENST00000261443 ZNF716A6NP11 495 aa5.98□□□□□ -1.45
CSDE1-201ENST00000261443 CRXO43186 299 aaPredicted RBP5.98□□□□□ -1.45
CSDE1-201ENST00000261443 NGFP01138 241 aa5.98□□□□□ -1.45
CSDE1-201ENST00000261443 IGLV2-8P01709 118 aa5.98□□□□□ -1.45
CSDE1-201ENST00000261443 OR9G9P0C7N8 305 aa5.98□□□□□ -1.45
CSDE1-201ENST00000261443 GPR183P32249 361 aa5.98□□□□□ -1.45
CSDE1-201ENST00000261443 REG1BP48304 166 aa5.98□□□□□ -1.45
CSDE1-201ENST00000261443 EIF4EBP1Q13541 118 aaPredicted RBP5.98□□□□□ -1.45
CSDE1-201ENST00000261443 GDF5OSQ5U4N7 250 aa5.98□□□□□ -1.45
CSDE1-201ENST00000261443 ASPHD1Q5U4P2 390 aa5.98□□□□□ -1.45
CSDE1-201ENST00000261443 C9orf135Q5VTT2 229 aa5.98□□□□□ -1.45
CSDE1-201ENST00000261443 C16orf54Q6UWD8 224 aa5.98□□□□□ -1.45
CSDE1-201ENST00000261443 MIR17HGQ75NE6 70 aa5.98□□□□□ -1.45
CSDE1-201ENST00000261443 TCF24Q7RTU0 167 aa5.98□□□□□ -1.45
CSDE1-201ENST00000261443 C5orf17Q8NAS9 161 aa5.98□□□□□ -1.45
CSDE1-201ENST00000261443 NHLRC2Q8NBF2 726 aa5.98□□□□□ -1.45
CSDE1-201ENST00000261443 OR1N2Q8NGR9 330 aa5.98□□□□□ -1.45
CSDE1-201ENST00000261443 TMEM167BQ9NRX6 74 aa5.98□□□□□ -1.45
CSDE1-201ENST00000261443 TNRC6BQ9UPQ9 1833 aaKnown RBP5.97□□□□□ -1.45
CSDE1-201ENST00000261443 A0A096LPE4 126 aa5.97□□□□□ -1.45
CSDE1-201ENST00000261443 A0A1W2PPZ6 126 aa5.97□□□□□ -1.45
CSDE1-201ENST00000261443 LMO7DNF2Z398 122 aa5.97□□□□□ -1.45
CSDE1-201ENST00000261443 PPIAL4DF5H284 164 aa5.97□□□□□ -1.45
CSDE1-201ENST00000261443 CXCL13O43927 109 aa5.97□□□□□ -1.45
CSDE1-201ENST00000261443 HLA-DRB1P01911 266 aa5.97□□□□□ -1.45
CSDE1-201ENST00000261443 APOA2P02652 100 aa5.97□□□□□ -1.45
CSDE1-201ENST00000261443 MYF5P13349 255 aa5.97□□□□□ -1.45
CSDE1-201ENST00000261443 CAMPP49913 170 aa5.97□□□□□ -1.45
CSDE1-201ENST00000261443 RAB31Q13636 194 aa5.97□□□□□ -1.45
CSDE1-201ENST00000261443 TEPPQ6URK8 271 aa5.97□□□□□ -1.45
CSDE1-201ENST00000261443 S100A7AQ86SG5 101 aa5.97□□□□□ -1.45
CSDE1-201ENST00000261443 ABHD12Q8N2K0 398 aa5.97□□□□□ -1.45
CSDE1-201ENST00000261443 POM121L2Q96KW2 1035 aa5.97□□□□□ -1.45
CSDE1-201ENST00000261443 PHF7Q9BWX1 381 aaPredicted RBP5.97□□□□□ -1.45
CSDE1-201ENST00000261443 PLEKHA3Q9HB20 300 aa5.97□□□□□ -1.45
CSDE1-201ENST00000261443 ZNF355PQ9NSJ1 428 aa5.97□□□□□ -1.45
CSDE1-201ENST00000261443 NCOR1O75376 2440 aa5.97□□□□□ -1.45
CSDE1-201ENST00000261443 LINC00473A8K010 186 aa5.97□□□□□ -1.45
CSDE1-201ENST00000261443 GNG7O60262 68 aa5.97□□□□□ -1.45
CSDE1-201ENST00000261443 LEPROTL1O95214 131 aa5.97□□□□□ -1.45
CSDE1-201ENST00000261443 GOSR1O95249 250 aa5.97□□□□□ -1.45
CSDE1-201ENST00000261443 CD46P15529 392 aa5.97□□□□□ -1.45
CSDE1-201ENST00000261443 LTBRP36941 435 aa5.97□□□□□ -1.45
CSDE1-201ENST00000261443 LGALS7P47929 136 aa5.97□□□□□ -1.45
CSDE1-201ENST00000261443 PPOXP50336 477 aa5.97□□□□□ -1.45
CSDE1-201ENST00000261443 TMPRSS3P57727 454 aa5.97□□□□□ -1.45
CSDE1-201ENST00000261443 NHLH1Q02575 133 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 118.9 ms