RNA–Protein interactions for RNA: ENST00000261366.9

LMNB1-201, Transcript of lamin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNB1, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-201ENST00000261366 SMG1Q96Q15 3661 aaKnown RBP13.15□□□□□ -0.3
LMNB1-201ENST00000261366 NDUFB8O95169 186 aa13.14□□□□□ -0.31
LMNB1-201ENST00000261366 C3orf79P0CE67 100 aa13.14□□□□□ -0.31
LMNB1-201ENST00000261366 PTTG1IPP53801 180 aa13.14□□□□□ -0.31
LMNB1-201ENST00000261366 ERVK-16P61578 105 aa13.14□□□□□ -0.31
LMNB1-201ENST00000261366 DCAF12Q5T6F0 453 aa13.14□□□□□ -0.31
LMNB1-201ENST00000261366 C1orf174Q8IYL3 243 aa13.14□□□□□ -0.31
LMNB1-201ENST00000261366 OR4B1Q8NGF8 309 aa13.14□□□□□ -0.31
LMNB1-201ENST00000261366 ARRDC1-AS1Q9H2J1 176 aa13.14□□□□□ -0.31
LMNB1-201ENST00000261366 PCSK5Q92824 1860 aa13.14□□□□□ -0.31
LMNB1-201ENST00000261366 FBXW9Q5XUX1 488 aa13.14□□□□□ -0.31
LMNB1-201ENST00000261366 KLF14Q8TD94 323 aaPredicted RBP13.14□□□□□ -0.31
LMNB1-201ENST00000261366 TMEM140Q9NV12 185 aa13.14□□□□□ -0.31
LMNB1-201ENST00000261366 HEATR1Q9H583 2144 aaKnown RBP13.14□□□□□ -0.31
LMNB1-201ENST00000261366 C20orf202A1L168 122 aa13.14□□□□□ -0.31
LMNB1-201ENST00000261366 RHOBP62745 196 aa13.14□□□□□ -0.31
LMNB1-201ENST00000261366 ZNF766Q5HY98 468 aa13.14□□□□□ -0.31
LMNB1-201ENST00000261366 NANOS1Q8WY41 292 aaKnown RBP13.14□□□□□ -0.31
LMNB1-201ENST00000261366 LINC00479Q96M42 142 aa13.14□□□□□ -0.31
LMNB1-201ENST00000261366 TCF19Q9Y242 345 aa13.14□□□□□ -0.31
LMNB1-201ENST00000261366 LAMTOR2Q9Y2Q5 125 aa13.14□□□□□ -0.31
LMNB1-201ENST00000261366 IGHV3OR15-7A0A075B7D8 119 aa13.13□□□□□ -0.31
LMNB1-201ENST00000261366 SPINT2O43291 252 aa13.13□□□□□ -0.31
LMNB1-201ENST00000261366 SLC35E4Q6ICL7 350 aa13.13□□□□□ -0.31
LMNB1-201ENST00000261366 RNASE8Q8TDE3 154 aaKnown RBP13.13□□□□□ -0.31
LMNB1-201ENST00000261366 NPVFQ9HCQ7 196 aa13.13□□□□□ -0.31
LMNB1-201ENST00000261366 SPENQ96T58 3664 aaKnown RBP13.13□□□□□ -0.31
LMNB1-201ENST00000261366 DPRXA6NFQ7 191 aa13.13□□□□□ -0.31
LMNB1-201ENST00000261366 TEPPQ6URK8 271 aa13.13□□□□□ -0.31
LMNB1-201ENST00000261366 C6orf15Q6UXA7 325 aaPredicted RBP13.13□□□□□ -0.31
LMNB1-201ENST00000261366 ACP7Q6ZNF0 438 aa13.13□□□□□ -0.31
LMNB1-201ENST00000261366 ST6GALNAC6Q969X2 333 aa13.13□□□□□ -0.31
LMNB1-201ENST00000261366 CCL25O15444 150 aa13.12□□□□□ -0.31
LMNB1-201ENST00000261366 VDAC2P45880 294 aaPredicted RBP13.12□□□□□ -0.31
LMNB1-201ENST00000261366 ZNF134P52741 427 aa13.12□□□□□ -0.31
LMNB1-201ENST00000261366 RPP30P78346 268 aaKnown RBP13.12□□□□□ -0.31
LMNB1-201ENST00000261366 Q0VG73 95 aa13.12□□□□□ -0.31
LMNB1-201ENST00000261366 MRPL49Q13405 166 aaKnown RBP13.12□□□□□ -0.31
LMNB1-201ENST00000261366 MLANAQ16655 118 aa13.12□□□□□ -0.31
LMNB1-201ENST00000261366 KCNS1Q96KK3 526 aa13.12□□□□□ -0.31
LMNB1-201ENST00000261366 PLEKHA3Q9HB20 300 aa13.12□□□□□ -0.31
LMNB1-201ENST00000261366 BMPR1BO00238 502 aa13.12□□□□□ -0.31
LMNB1-201ENST00000261366 TIMM8AO60220 97 aaPredicted RBP13.12□□□□□ -0.31
LMNB1-201ENST00000261366 MPDU1O75352 247 aa13.12□□□□□ -0.31
LMNB1-201ENST00000261366 IGLC2P0DOY2 106 aa13.12□□□□□ -0.31
LMNB1-201ENST00000261366 IGLC3P0DOY3 106 aa13.12□□□□□ -0.31
LMNB1-201ENST00000261366 SSPNQ14714 243 aa13.12□□□□□ -0.31
LMNB1-201ENST00000261366 Q56UQ5 140 aa13.12□□□□□ -0.31
LMNB1-201ENST00000261366 TMEM136Q6ZRR5 245 aa13.12□□□□□ -0.31
LMNB1-201ENST00000261366 C11orf53Q8IXP5 236 aa13.12□□□□□ -0.31
LMNB1-201ENST00000261366 FAM168AQ92567 244 aa13.12□□□□□ -0.31
LMNB1-201ENST00000261366 GMPPAQ96IJ6 420 aaPredicted RBP13.12□□□□□ -0.31
LMNB1-201ENST00000261366 UQCR10Q9UDW1 63 aa13.12□□□□□ -0.31
LMNB1-201ENST00000261366 CA2P00918 260 aa13.11□□□□□ -0.31
LMNB1-201ENST00000261366 ESDP10768 282 aa13.11□□□□□ -0.31
LMNB1-201ENST00000261366 GPR6P46095 362 aaPredicted RBP13.11□□□□□ -0.31
LMNB1-201ENST00000261366 C1orf229Q6ZS94 237 aaPredicted RBP13.11□□□□□ -0.31
LMNB1-201ENST00000261366 S1PR3Q99500 378 aa13.11□□□□□ -0.31
LMNB1-201ENST00000261366 SFXN3Q9BWM7 321 aa13.11□□□□□ -0.31
LMNB1-201ENST00000261366 ROS1P08922 2347 aa13.11□□□□□ -0.31
LMNB1-201ENST00000261366 ZNF324O75467 553 aaPredicted RBP13.11□□□□□ -0.31
LMNB1-201ENST00000261366 RELBQ01201 579 aa13.11□□□□□ -0.31
LMNB1-201ENST00000261366 TIGITQ495A1 244 aa13.11□□□□□ -0.31
LMNB1-201ENST00000261366 PRR27Q6MZM9 219 aa13.11□□□□□ -0.31
LMNB1-201ENST00000261366 WDR82Q6UXN9 313 aa13.11□□□□□ -0.31
LMNB1-201ENST00000261366 CD177Q8N6Q3 437 aa13.11□□□□□ -0.31
LMNB1-201ENST00000261366 BORCS7Q96B45 105 aa13.11□□□□□ -0.31
LMNB1-201ENST00000261366 SGK494Q96LW2 274 aa13.11□□□□□ -0.31
LMNB1-201ENST00000261366 DUSP13Q9UII6 198 aa13.11□□□□□ -0.31
LMNB1-201ENST00000261366 MT-CO2P00403 227 aa13.1□□□□□ -0.31
LMNB1-201ENST00000261366 NPY1RP25929 384 aa13.1□□□□□ -0.31
LMNB1-201ENST00000261366 CTRLP40313 264 aa13.1□□□□□ -0.31
LMNB1-201ENST00000261366 MEOX1P50221 254 aa13.1□□□□□ -0.31
LMNB1-201ENST00000261366 ZNRF1Q8ND25 227 aa13.1□□□□□ -0.31
LMNB1-201ENST00000261366 SSBP4Q9BWG4 385 aaPredicted RBP13.1□□□□□ -0.31
LMNB1-201ENST00000261366 GNB1LQ9BYB4 327 aa13.1□□□□□ -0.31
LMNB1-201ENST00000261366 CDC42EP3Q9UKI2 254 aa13.1□□□□□ -0.31
LMNB1-201ENST00000261366 SLC45A2Q9UMX9 530 aa13.1□□□□□ -0.31
LMNB1-201ENST00000261366 TRGV10A0A0A0MS01 117 aa13.1□□□□□ -0.31
LMNB1-201ENST00000261366 PRSS46E5RG02 174 aa13.1□□□□□ -0.31
LMNB1-201ENST00000261366 SLAQ13239 276 aa13.1□□□□□ -0.31
LMNB1-201ENST00000261366 RNF151Q2KHN1 245 aa13.1□□□□□ -0.31
LMNB1-201ENST00000261366 NIT1Q86X76 327 aa13.1□□□□□ -0.31
LMNB1-201ENST00000261366 CLCF1Q9UBD9 225 aa13.1□□□□□ -0.31
LMNB1-201ENST00000261366 CX3CL1P78423 397 aa13.1□□□□□ -0.31
LMNB1-201ENST00000261366 IBA57Q5T440 356 aaKnown RBP13.1□□□□□ -0.31
LMNB1-201ENST00000261366 CNEP1R1Q8N9A8 125 aa13.1□□□□□ -0.31
LMNB1-201ENST00000261366 SLC24A4Q8NFF2 622 aa13.1□□□□□ -0.31
LMNB1-201ENST00000261366 TSKUQ8WUA8 353 aa13.1□□□□□ -0.31
LMNB1-201ENST00000261366 LRRC29Q8WV35 223 aa13.1□□□□□ -0.31
LMNB1-201ENST00000261366 ENY2Q9NPA8 101 aa13.1□□□□□ -0.31
LMNB1-201ENST00000261366 SLC35D1Q9NTN3 355 aa13.1□□□□□ -0.31
LMNB1-201ENST00000261366 ABCA1O95477 2261 aa13.1□□□□□ -0.31
LMNB1-201ENST00000261366 IGHV3-48P01763 117 aa13.09□□□□□ -0.31
LMNB1-201ENST00000261366 USF1P22415 310 aaPredicted RBP13.09□□□□□ -0.31
LMNB1-201ENST00000261366 ACP1P24666 158 aa13.09□□□□□ -0.31
LMNB1-201ENST00000261366 HES3Q5TGS1 186 aa13.09□□□□□ -0.31
LMNB1-201ENST00000261366 TXNDC17Q9BRA2 123 aa13.09□□□□□ -0.31
LMNB1-201ENST00000261366 CLEC7AQ9BXN2 247 aa13.09□□□□□ -0.31
LMNB1-201ENST00000261366 LNP1A1A4G5 178 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms