RNA–Protein interactions for RNA: ENST00000258499.7

USP44-201, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 4,022 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-201ENST00000258499 RANP62826 216 aaKnown RBP3.94□□□□□ -1.78
USP44-201ENST00000258499 LCN2P80188 198 aa3.94□□□□□ -1.78
USP44-201ENST00000258499 MORN2Q502X0 79 aa3.94□□□□□ -1.78
USP44-201ENST00000258499 RNASEKQ6P5S7 137 aaKnown RBP3.94□□□□□ -1.78
USP44-201ENST00000258499 ZCCHC24Q8N2G6 241 aaKnown RBP3.94□□□□□ -1.78
USP44-201ENST00000258499 CD177Q8N6Q3 437 aa3.94□□□□□ -1.78
USP44-201ENST00000258499 NDUFAF3Q9BU61 184 aa3.94□□□□□ -1.78
USP44-201ENST00000258499 GGTLC1Q9BX51 225 aa3.94□□□□□ -1.78
USP44-201ENST00000258499 RNASE7Q9H1E1 156 aaKnown RBP3.94□□□□□ -1.78
USP44-201ENST00000258499 IL19Q9UHD0 177 aa3.94□□□□□ -1.78
USP44-201ENST00000258499 ZNF835Q9Y2P0 537 aa3.94□□□□□ -1.78
USP44-201ENST00000258499 DIRC3C9JPN6 131 aa3.94□□□□□ -1.78
USP44-201ENST00000258499 NPIPB11E5RHQ5 1161 aa3.94□□□□□ -1.78
USP44-201ENST00000258499 H3BTX0 84 aa3.94□□□□□ -1.78
USP44-201ENST00000258499 FOXH1O75593 365 aa3.94□□□□□ -1.78
USP44-201ENST00000258499 CA1P00915 261 aaPredicted RBP3.94□□□□□ -1.78
USP44-201ENST00000258499 IGLV2-14P01704 120 aa3.94□□□□□ -1.78
USP44-201ENST00000258499 FOSL1P15407 271 aa3.94□□□□□ -1.78
USP44-201ENST00000258499 CHRNB4P30926 498 aa3.94□□□□□ -1.78
USP44-201ENST00000258499 TIMP3P35625 211 aa3.94□□□□□ -1.78
USP44-201ENST00000258499 TAS2R60P59551 318 aa3.94□□□□□ -1.78
USP44-201ENST00000258499 OR4A47Q6IF82 309 aa3.94□□□□□ -1.78
USP44-201ENST00000258499 MOB3BQ86TA1 216 aa3.94□□□□□ -1.78
USP44-201ENST00000258499 FAM216BQ8N7L0 139 aa3.94□□□□□ -1.78
USP44-201ENST00000258499 TCTEX1D1Q8N7M0 179 aa3.94□□□□□ -1.78
USP44-201ENST00000258499 OR5R1Q8NH85 324 aa3.94□□□□□ -1.78
USP44-201ENST00000258499 STARD4Q96DR4 205 aa3.94□□□□□ -1.78
USP44-201ENST00000258499 NABP2Q9BQ15 211 aa3.94□□□□□ -1.78
USP44-201ENST00000258499 TMEM167BQ9NRX6 74 aa3.94□□□□□ -1.78
USP44-201ENST00000258499 JPT1Q9UK76 154 aa3.94□□□□□ -1.78
USP44-201ENST00000258499 CPAMD8Q8IZJ3 1885 aa3.94□□□□□ -1.78
USP44-201ENST00000258499 RBFOX2O43251 390 aaKnown RBP eCLIP3.93□□□□□ -1.78
USP44-201ENST00000258499 REG1AP05451 166 aa3.93□□□□□ -1.78
USP44-201ENST00000258499 SRIP30626 198 aa3.93□□□□□ -1.78
USP44-201ENST00000258499 ERVK11-1P61568 191 aa3.93□□□□□ -1.78
USP44-201ENST00000258499 TEX38Q6PEX7 206 aa3.93□□□□□ -1.78
USP44-201ENST00000258499 Q6ZR03 302 aa3.93□□□□□ -1.78
USP44-201ENST00000258499 MGST2Q99735 147 aa3.93□□□□□ -1.78
USP44-201ENST00000258499 HES4Q9HCC6 221 aa3.93□□□□□ -1.78
USP44-201ENST00000258499 ZNRD1Q9P1U0 126 aa3.93□□□□□ -1.78
USP44-201ENST00000258499 RNF7Q9UBF6 113 aa3.93□□□□□ -1.78
USP44-201ENST00000258499 SAA2-SAA4A0A096LPE2 208 aa3.93□□□□□ -1.78
USP44-201ENST00000258499 PRR33A8MZF0 331 aa3.93□□□□□ -1.78
USP44-201ENST00000258499 J3QW42 95 aa3.93□□□□□ -1.78
USP44-201ENST00000258499 EREGO14944 169 aa3.93□□□□□ -1.78
USP44-201ENST00000258499 SLC25A5P05141 298 aaKnown RBP3.93□□□□□ -1.78
USP44-201ENST00000258499 LINC00869P0C866 280 aa3.93□□□□□ -1.78
USP44-201ENST00000258499 SAA2P0DJI9 122 aaPredicted RBP3.93□□□□□ -1.78
USP44-201ENST00000258499 PRB4P10163 310 aaPredicted RBP3.93□□□□□ -1.78
USP44-201ENST00000258499 USF1P22415 310 aaPredicted RBP3.93□□□□□ -1.78
USP44-201ENST00000258499 KIR2DS2P43631 304 aa3.93□□□□□ -1.78
USP44-201ENST00000258499 HNRNPA3P51991 378 aaKnown RBP3.93□□□□□ -1.78
USP44-201ENST00000258499 PRB3Q04118 309 aaPredicted RBP3.93□□□□□ -1.78
USP44-201ENST00000258499 EFNB3Q15768 340 aa3.93□□□□□ -1.78
USP44-201ENST00000258499 MLANAQ16655 118 aa3.93□□□□□ -1.78
USP44-201ENST00000258499 IBA57Q5T440 356 aaKnown RBP3.93□□□□□ -1.78
USP44-201ENST00000258499 HCP5Q6MZN7 132 aa3.93□□□□□ -1.78
USP44-201ENST00000258499 Q6ZN92 141 aa3.93□□□□□ -1.78
USP44-201ENST00000258499 FAM19A2Q8N3H0 131 aa3.93□□□□□ -1.78
USP44-201ENST00000258499 OR2D3Q8NGH3 330 aa3.93□□□□□ -1.78
USP44-201ENST00000258499 PRNDQ9UKY0 176 aa3.93□□□□□ -1.78
USP44-201ENST00000258499 YLPM1P49750 1951 aaKnown RBP3.93□□□□□ -1.78
USP44-201ENST00000258499 FRYQ5TBA9 3013 aa3.93□□□□□ -1.78
USP44-201ENST00000258499 TMEM265A0A087WTH1 108 aa3.93□□□□□ -1.78
USP44-201ENST00000258499 hADV38S2A0JD32 116 aa3.93□□□□□ -1.78
USP44-201ENST00000258499 M0R296 226 aa3.93□□□□□ -1.78
USP44-201ENST00000258499 WISP2O76076 250 aa3.93□□□□□ -1.78
USP44-201ENST00000258499 BRS3P32247 399 aa3.93□□□□□ -1.78
USP44-201ENST00000258499 MAS1LP35410 378 aa3.93□□□□□ -1.78
USP44-201ENST00000258499 KIR2DL2P43627 348 aaPredicted RBP3.93□□□□□ -1.78
USP44-201ENST00000258499 SUB1P53999 127 aaKnown RBP eCLIP3.93□□□□□ -1.78
USP44-201ENST00000258499 ASPHD1Q5U4P2 390 aa3.93□□□□□ -1.78
USP44-201ENST00000258499 LHFPL4Q7Z7J7 247 aa3.93□□□□□ -1.78
USP44-201ENST00000258499 GBGT1Q8N5D6 347 aa3.93□□□□□ -1.78
USP44-201ENST00000258499 MDS2Q8NDY4 140 aa3.93□□□□□ -1.78
USP44-201ENST00000258499 OR1B1Q8NGR6 318 aa3.93□□□□□ -1.78
USP44-201ENST00000258499 OR9G1Q8NH87 305 aa3.93□□□□□ -1.78
USP44-201ENST00000258499 AGMATQ9BSE5 352 aa3.93□□□□□ -1.78
USP44-201ENST00000258499 YTHDF2Q9Y5A9 579 aaKnown RBP3.93□□□□□ -1.78
USP44-201ENST00000258499 TECTAO75443 2155 aa3.93□□□□□ -1.78
USP44-201ENST00000258499 GFRA3O60609 400 aa3.92□□□□□ -1.78
USP44-201ENST00000258499 GGCTO75223 188 aaKnown RBP3.92□□□□□ -1.78
USP44-201ENST00000258499 SP9P0CG40 484 aa3.92□□□□□ -1.78
USP44-201ENST00000258499 NPPCP23582 126 aa3.92□□□□□ -1.78
USP44-201ENST00000258499 ZNF137PP52743 207 aa3.92□□□□□ -1.78
USP44-201ENST00000258499 Q56UQ5 140 aa3.92□□□□□ -1.78
USP44-201ENST00000258499 ACTL10Q5JWF8 245 aa3.92□□□□□ -1.78
USP44-201ENST00000258499 ZCCHC14Q8WYQ9 949 aaKnown RBP3.92□□□□□ -1.78
USP44-201ENST00000258499 ADTRPQ96IZ2 230 aa3.92□□□□□ -1.78
USP44-201ENST00000258499 YPEL4Q96NS1 127 aa3.92□□□□□ -1.78
USP44-201ENST00000258499 WNT10AQ9GZT5 417 aa3.92□□□□□ -1.78
USP44-201ENST00000258499 ZNF355PQ9NSJ1 428 aa3.92□□□□□ -1.78
USP44-201ENST00000258499 IL36BQ9NZH7 164 aa3.92□□□□□ -1.78
USP44-201ENST00000258499 IGKV1D-17A0A075B6S4 117 aa3.92□□□□□ -1.78
USP44-201ENST00000258499 IGHV1-18A0A0C4DH31 117 aa3.92□□□□□ -1.78
USP44-201ENST00000258499 A6NNC1 897 aa3.92□□□□□ -1.78
USP44-201ENST00000258499 A8MWP6 167 aa3.92□□□□□ -1.78
USP44-201ENST00000258499 CSN3P07498 182 aa3.92□□□□□ -1.78
USP44-201ENST00000258499 STAG3L2P0CL84 134 aa3.92□□□□□ -1.78
USP44-201ENST00000258499 STAG3L3P0CL85 134 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms