RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 BCL2L10Q9HD36 194 aa5.72□□□□□ -1.49
PDGFRA-201ENST00000257290 LIPT2A6NK58 231 aa5.72□□□□□ -1.49
PDGFRA-201ENST00000257290 CDX4O14627 284 aaPredicted RBP5.72□□□□□ -1.49
PDGFRA-201ENST00000257290 HERVK_113P63121 156 aa5.72□□□□□ -1.49
PDGFRA-201ENST00000257290 PRDX1Q06830 199 aaKnown RBP5.72□□□□□ -1.49
PDGFRA-201ENST00000257290 SFTA2Q6UW10 78 aa5.72□□□□□ -1.49
PDGFRA-201ENST00000257290 WDR31Q8NA23 367 aa5.72□□□□□ -1.49
PDGFRA-201ENST00000257290 A0A1B0GX78 115 aa5.72□□□□□ -1.49
PDGFRA-201ENST00000257290 PRR33A8MZF0 331 aa5.72□□□□□ -1.49
PDGFRA-201ENST00000257290 FCGR3BO75015 233 aa5.72□□□□□ -1.49
PDGFRA-201ENST00000257290 PAX1P15863 534 aa5.72□□□□□ -1.49
PDGFRA-201ENST00000257290 APOBEC1P41238 236 aaKnown RBP5.72□□□□□ -1.49
PDGFRA-201ENST00000257290 SPATA31B1PQ5VZV4 182 aa5.72□□□□□ -1.49
PDGFRA-201ENST00000257290 TSKUQ8WUA8 353 aa5.72□□□□□ -1.49
PDGFRA-201ENST00000257290 PRNDQ9UKY0 176 aa5.72□□□□□ -1.49
PDGFRA-201ENST00000257290 A0A0G2JK05 382 aa5.72□□□□□ -1.49
PDGFRA-201ENST00000257290 PFN3P60673 137 aa5.72□□□□□ -1.49
PDGFRA-201ENST00000257290 TMEM42Q69YG0 159 aa5.72□□□□□ -1.49
PDGFRA-201ENST00000257290 HRCT1Q6UXD1 115 aa5.72□□□□□ -1.49
PDGFRA-201ENST00000257290 GTSCR1Q86UQ5 136 aa5.72□□□□□ -1.49
PDGFRA-201ENST00000257290 KIR3DL3Q8N743 410 aa5.72□□□□□ -1.49
PDGFRA-201ENST00000257290 PFN4Q8NHR9 129 aa5.72□□□□□ -1.49
PDGFRA-201ENST00000257290 ARHGAP5-AS1Q96IT6 56 aa5.72□□□□□ -1.49
PDGFRA-201ENST00000257290 C4orf45Q96LM5 186 aa5.72□□□□□ -1.49
PDGFRA-201ENST00000257290 IFNL4K9M1U5 179 aa5.72□□□□□ -1.49
PDGFRA-201ENST00000257290 GZMMP51124 257 aa5.72□□□□□ -1.49
PDGFRA-201ENST00000257290 TBC1D26Q86UD7 250 aa5.72□□□□□ -1.49
PDGFRA-201ENST00000257290 ARID2Q68CP9 1835 aa5.72□□□□□ -1.49
PDGFRA-201ENST00000257290 A0A1B0GWA3 101 aa5.71□□□□□ -1.49
PDGFRA-201ENST00000257290 A0A1W2PRX2 142 aa5.71□□□□□ -1.49
PDGFRA-201ENST00000257290 PRSS37A4D1T9 235 aa5.71□□□□□ -1.49
PDGFRA-201ENST00000257290 C5orf49A4QMS7 147 aa5.71□□□□□ -1.49
PDGFRA-201ENST00000257290 FOXI3A8MTJ6 420 aaPredicted RBP5.71□□□□□ -1.49
PDGFRA-201ENST00000257290 H3BMM0 161 aa5.71□□□□□ -1.49
PDGFRA-201ENST00000257290 ATOX1O00244 68 aa5.71□□□□□ -1.49
PDGFRA-201ENST00000257290 FXYD3Q14802 87 aa5.71□□□□□ -1.49
PDGFRA-201ENST00000257290 VMA21Q3ZAQ7 101 aa5.71□□□□□ -1.49
PDGFRA-201ENST00000257290 FAM19A5Q7Z5A7 132 aaPredicted RBP5.71□□□□□ -1.49
PDGFRA-201ENST00000257290 UBE2WQ96B02 151 aa5.71□□□□□ -1.49
PDGFRA-201ENST00000257290 R4GMQ9 66 aa5.71□□□□□ -1.49
PDGFRA-201ENST00000257290 CCDC179H3BU77 68 aa5.71□□□□□ -1.49
PDGFRA-201ENST00000257290 LINC01565O15544 149 aa5.71□□□□□ -1.49
PDGFRA-201ENST00000257290 WFDC2Q14508 124 aa5.71□□□□□ -1.49
PDGFRA-201ENST00000257290 ATXN8Q156A1 80 aa5.71□□□□□ -1.49
PDGFRA-201ENST00000257290 MRPL2Q5T653 305 aaKnown RBP5.71□□□□□ -1.49
PDGFRA-201ENST00000257290 TAF15Q92804 592 aaKnown RBP eCLIP5.71□□□□□ -1.49
PDGFRA-201ENST00000257290 SPTSSAQ969W0 71 aa5.71□□□□□ -1.49
PDGFRA-201ENST00000257290 MCRIP2Q9BUT9 160 aaKnown RBP5.71□□□□□ -1.49
PDGFRA-201ENST00000257290 CHAC1Q9BUX1 264 aa5.71□□□□□ -1.49
PDGFRA-201ENST00000257290 LOC102723996A0A087X1L8 192 aa5.71□□□□□ -1.5
PDGFRA-201ENST00000257290 LOC389332A0A1B0GUA5 103 aa5.71□□□□□ -1.5
PDGFRA-201ENST00000257290 NDUFA7O95182 113 aa5.71□□□□□ -1.5
PDGFRA-201ENST00000257290 SYNJ2BPP57105 145 aa5.71□□□□□ -1.5
PDGFRA-201ENST00000257290 RBM3P98179 157 aaKnown RBP5.71□□□□□ -1.5
PDGFRA-201ENST00000257290 DEFB133Q30KQ1 61 aa5.71□□□□□ -1.5
PDGFRA-201ENST00000257290 FAM231DQ6ZW35 169 aa5.71□□□□□ -1.5
PDGFRA-201ENST00000257290 JMJD8Q96S16 334 aa5.71□□□□□ -1.5
PDGFRA-201ENST00000257290 NRTNQ99748 197 aa5.71□□□□□ -1.5
PDGFRA-201ENST00000257290 C5orf66Q9H5L9 145 aa5.71□□□□□ -1.5
PDGFRA-201ENST00000257290 TIMM9Q9Y5J7 89 aa5.71□□□□□ -1.5
PDGFRA-201ENST00000257290 KCNE3Q9Y6H6 103 aa5.71□□□□□ -1.5
PDGFRA-201ENST00000257290 DSPPQ9NZW4 1301 aa5.71□□□□□ -1.5
PDGFRA-201ENST00000257290 ZNF638Q14966 1978 aaKnown RBP5.71□□□□□ -1.5
PDGFRA-201ENST00000257290 NPIPB13A6NJU9 1138 aa5.71□□□□□ -1.5
PDGFRA-201ENST00000257290 NPIPB4C9JG80 1138 aa5.71□□□□□ -1.5
PDGFRA-201ENST00000257290 J3QLI3 93 aa5.71□□□□□ -1.5
PDGFRA-201ENST00000257290 LYL1P12980 280 aa5.71□□□□□ -1.5
PDGFRA-201ENST00000257290 FOXA3P55318 350 aaPredicted RBP5.71□□□□□ -1.5
PDGFRA-201ENST00000257290 HGFACQ04756 655 aa5.71□□□□□ -1.5
PDGFRA-201ENST00000257290 S100A7L2Q5SY68 101 aa5.71□□□□□ -1.5
PDGFRA-201ENST00000257290 C2orf82Q6UX34 121 aa5.71□□□□□ -1.5
PDGFRA-201ENST00000257290 UNQ9370/PRO34162Q6UXP9 181 aa5.71□□□□□ -1.5
PDGFRA-201ENST00000257290 BMFQ96LC9 184 aa5.71□□□□□ -1.5
PDGFRA-201ENST00000257290 ARID1AO14497 2285 aa5.71□□□□□ -1.5
PDGFRA-201ENST00000257290 TP53BP1Q12888 1972 aaPredicted RBP5.71□□□□□ -1.5
PDGFRA-201ENST00000257290 HMGN4O00479 90 aa5.71□□□□□ -1.5
PDGFRA-201ENST00000257290 CISD3P0C7P0 127 aa5.71□□□□□ -1.5
PDGFRA-201ENST00000257290 LGALS3P17931 250 aaKnown RBP5.71□□□□□ -1.5
PDGFRA-201ENST00000257290 CD27P26842 260 aa5.71□□□□□ -1.5
PDGFRA-201ENST00000257290 REG1BP48304 166 aa5.71□□□□□ -1.5
PDGFRA-201ENST00000257290 RPL8P62917 257 aaKnown RBP5.71□□□□□ -1.5
PDGFRA-201ENST00000257290 KIAA0040Q15053 153 aa5.71□□□□□ -1.5
PDGFRA-201ENST00000257290 TNFRSF19Q9NS68 423 aa5.71□□□□□ -1.5
PDGFRA-201ENST00000257290 OTOFQ9HC10 1997 aa5.71□□□□□ -1.5
PDGFRA-201ENST00000257290 A0A0U1RRA0 63 aa5.71□□□□□ -1.5
PDGFRA-201ENST00000257290 A0A1B0GUS0 222 aa5.71□□□□□ -1.5
PDGFRA-201ENST00000257290 WIPF3A6NGB9 483 aa5.71□□□□□ -1.5
PDGFRA-201ENST00000257290 NTN1O95631 604 aa5.71□□□□□ -1.5
PDGFRA-201ENST00000257290 APOHP02749 345 aaPredicted RBP5.71□□□□□ -1.5
PDGFRA-201ENST00000257290 PF4P02776 101 aa5.71□□□□□ -1.5
PDGFRA-201ENST00000257290 YPEL3P61236 119 aaPredicted RBP5.71□□□□□ -1.5
PDGFRA-201ENST00000257290 PQLC2Q6ZP29 291 aa5.71□□□□□ -1.5
PDGFRA-201ENST00000257290 DOCK5Q9H7D0 1870 aa5.7□□□□□ -1.5
PDGFRA-201ENST00000257290 A0A1B0GTL3 188 aa5.7□□□□□ -1.5
PDGFRA-201ENST00000257290 NAPSAO96009 420 aa5.7□□□□□ -1.5
PDGFRA-201ENST00000257290 LINC00694P0DN24 101 aa5.7□□□□□ -1.5
PDGFRA-201ENST00000257290 NRN1LQ496H8 165 aa5.7□□□□□ -1.5
PDGFRA-201ENST00000257290 H3BTX0 84 aa5.7□□□□□ -1.5
PDGFRA-201ENST00000257290 CT83Q5H943 113 aa5.7□□□□□ -1.5
PDGFRA-201ENST00000257290 C1orf140Q5VVS0 124 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms