RNA–Protein interactions for RNA: ENST00000254667.7

PTPRE-201, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRE, Length 5,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-201ENST00000254667 IGKV1-9A0A0C4DH69 117 aa15.92■□□□□ 0.14
PTPRE-201ENST00000254667 NUTF2P61970 127 aaKnown RBP15.92■□□□□ 0.14
PTPRE-201ENST00000254667 DOCK6Q96HP0 2047 aa15.92■□□□□ 0.14
PTPRE-201ENST00000254667 ZNF324O75467 553 aaPredicted RBP15.92■□□□□ 0.14
PTPRE-201ENST00000254667 CRYGSP22914 178 aa15.92■□□□□ 0.14
PTPRE-201ENST00000254667 HIST1H1AQ02539 215 aaPredicted RBP15.92■□□□□ 0.14
PTPRE-201ENST00000254667 HERPUD1Q15011 391 aa15.92■□□□□ 0.14
PTPRE-201ENST00000254667 H3BTX0 84 aa15.92■□□□□ 0.14
PTPRE-201ENST00000254667 RBFOX2O43251 390 aaKnown RBP eCLIP15.91■□□□□ 0.14
PTPRE-201ENST00000254667 FHITP49789 147 aa15.91■□□□□ 0.14
PTPRE-201ENST00000254667 SLC25A28Q96A46 364 aa15.91■□□□□ 0.14
PTPRE-201ENST00000254667 TMEM70Q9BUB7 260 aa15.91■□□□□ 0.14
PTPRE-201ENST00000254667 ICE1Q9Y2F5 2266 aa15.91■□□□□ 0.14
PTPRE-201ENST00000254667 NYNRINQ9P2P1 1898 aaKnown RBP15.91■□□□□ 0.14
PTPRE-201ENST00000254667 SMAD7O15105 426 aaKnown RBP15.91■□□□□ 0.14
PTPRE-201ENST00000254667 ICAM4Q14773 271 aa15.91■□□□□ 0.14
PTPRE-201ENST00000254667 SCN2AQ99250 2005 aa15.91■□□□□ 0.14
PTPRE-201ENST00000254667 TGIF2-C20orf24A0A0A6YYL0 155 aa15.91■□□□□ 0.14
PTPRE-201ENST00000254667 A1L4Q6 167 aa15.91■□□□□ 0.14
PTPRE-201ENST00000254667 IGFBP2P18065 325 aa15.91■□□□□ 0.14
PTPRE-201ENST00000254667 PAPPA-AS1Q5QFB9 102 aa15.91■□□□□ 0.14
PTPRE-201ENST00000254667 OR4X2Q8NGF9 303 aa15.91■□□□□ 0.14
PTPRE-201ENST00000254667 FAM131CQ96AQ9 280 aa15.91■□□□□ 0.14
PTPRE-201ENST00000254667 TMEM133Q9H2Q1 129 aa15.91■□□□□ 0.14
PTPRE-201ENST00000254667 GREB1Q4ZG55 1949 aa15.9■□□□□ 0.14
PTPRE-201ENST00000254667 UPK2O00526 184 aa15.9■□□□□ 0.14
PTPRE-201ENST00000254667 IFITM2Q01629 132 aa15.9■□□□□ 0.14
PTPRE-201ENST00000254667 FOXA2Q9Y261 457 aaPredicted RBP15.9■□□□□ 0.14
PTPRE-201ENST00000254667 NBR2O15453 112 aa15.9■□□□□ 0.14
PTPRE-201ENST00000254667 GGNQ86UU5 652 aa15.9■□□□□ 0.14
PTPRE-201ENST00000254667 TEX45Q8NA69 505 aa15.9■□□□□ 0.14
PTPRE-201ENST00000254667 NUP37Q8NFH4 326 aa15.9■□□□□ 0.14
PTPRE-201ENST00000254667 OR10AG1Q8NH19 301 aa15.9■□□□□ 0.14
PTPRE-201ENST00000254667 PLSCR4Q9NRQ2 329 aa15.9■□□□□ 0.14
PTPRE-201ENST00000254667 FOXI3A8MTJ6 420 aaPredicted RBP15.9■□□□□ 0.14
PTPRE-201ENST00000254667 THBDP07204 575 aa15.9■□□□□ 0.14
PTPRE-201ENST00000254667 MPZP25189 248 aa15.9■□□□□ 0.14
PTPRE-201ENST00000254667 SAA2-SAA4A0A096LPE2 208 aa15.89■□□□□ 0.13
PTPRE-201ENST00000254667 SAA2P0DJI9 122 aaPredicted RBP15.89■□□□□ 0.13
PTPRE-201ENST00000254667 IGHV3-35A0A0C4DH35 117 aa15.89■□□□□ 0.13
PTPRE-201ENST00000254667 FBLL1A6NHQ2 334 aaKnown RBP15.89■□□□□ 0.13
PTPRE-201ENST00000254667 MSGN1A6NI15 193 aa15.89■□□□□ 0.13
PTPRE-201ENST00000254667 IGKV3-15P01624 115 aa15.89■□□□□ 0.13
PTPRE-201ENST00000254667 RPLP1P05386 114 aaKnown RBP15.89■□□□□ 0.13
PTPRE-201ENST00000254667 KIR2DL4Q99706 377 aa15.89■□□□□ 0.13
PTPRE-201ENST00000254667 TGFAP01135 160 aa15.89■□□□□ 0.13
PTPRE-201ENST00000254667 SRIP30626 198 aa15.89■□□□□ 0.13
PTPRE-201ENST00000254667 HBBP68871 147 aa15.89■□□□□ 0.13
PTPRE-201ENST00000254667 MORN2Q502X0 79 aa15.89■□□□□ 0.13
PTPRE-201ENST00000254667 TNFRSF14Q92956 283 aa15.89■□□□□ 0.13
PTPRE-201ENST00000254667 DOCK4Q8N1I0 1966 aa15.89■□□□□ 0.13
PTPRE-201ENST00000254667 CDKN1AP38936 164 aa15.89■□□□□ 0.13
PTPRE-201ENST00000254667 C18orf12Q96KH6 178 aa15.89■□□□□ 0.13
PTPRE-201ENST00000254667 FAM181BA6NEQ2 426 aa15.88■□□□□ 0.13
PTPRE-201ENST00000254667 SAA1P0DJI8 122 aaPredicted RBP15.88■□□□□ 0.13
PTPRE-201ENST00000254667 MST1P26927 711 aa15.88■□□□□ 0.13
PTPRE-201ENST00000254667 SRSF7Q16629 238 aaKnown RBP eCLIP15.88■□□□□ 0.13
PTPRE-201ENST00000254667 CCL3L1P16619 93 aa15.88■□□□□ 0.13
PTPRE-201ENST00000254667 TMEM144Q7Z5S9 345 aa15.88■□□□□ 0.13
PTPRE-201ENST00000254667 OR10S1Q8NGN2 331 aa15.88■□□□□ 0.13
PTPRE-201ENST00000254667 OR52E5Q8NH55 327 aa15.88■□□□□ 0.13
PTPRE-201ENST00000254667 TRAV24A0A0B4J272 114 aa15.88■□□□□ 0.13
PTPRE-201ENST00000254667 MPTX1A8MV57 137 aa15.88■□□□□ 0.13
PTPRE-201ENST00000254667 MBNL2Q5VZF2 373 aaKnown RBP15.88■□□□□ 0.13
PTPRE-201ENST00000254667 FOLR2P14207 255 aa15.87■□□□□ 0.13
PTPRE-201ENST00000254667 NAT1P18440 290 aa15.87■□□□□ 0.13
PTPRE-201ENST00000254667 TFF3Q07654 80 aa15.87■□□□□ 0.13
PTPRE-201ENST00000254667 NR2C2APQ86WQ0 139 aa15.87■□□□□ 0.13
PTPRE-201ENST00000254667 EFNA2O43921 213 aa15.87■□□□□ 0.13
PTPRE-201ENST00000254667 EIF3GO75821 320 aaKnown RBP eCLIP15.87■□□□□ 0.13
PTPRE-201ENST00000254667 ZNF418Q8TF45 676 aaPredicted RBP15.87■□□□□ 0.13
PTPRE-201ENST00000254667 COPS9Q8WXC6 57 aa15.87■□□□□ 0.13
PTPRE-201ENST00000254667 FAM90A9PA6NNJ1 464 aa15.87■□□□□ 0.13
PTPRE-201ENST00000254667 PRR32B1ATL7 298 aa15.87■□□□□ 0.13
PTPRE-201ENST00000254667 RPL24P83731 157 aaKnown RBP15.87■□□□□ 0.13
PTPRE-201ENST00000254667 ZNF525Q8N782 197 aa15.87■□□□□ 0.13
PTPRE-201ENST00000254667 NEU1Q99519 415 aa15.87■□□□□ 0.13
PTPRE-201ENST00000254667 C15orf61A6NNL5 157 aa15.87■□□□□ 0.13
PTPRE-201ENST00000254667 PPP1R17O96001 155 aa15.87■□□□□ 0.13
PTPRE-201ENST00000254667 GPR183P32249 361 aa15.87■□□□□ 0.13
PTPRE-201ENST00000254667 EFNB1P98172 346 aa15.87■□□□□ 0.13
PTPRE-201ENST00000254667 ZNF56Q15929 161 aa15.87■□□□□ 0.13
PTPRE-201ENST00000254667 TBR1Q16650 682 aa15.87■□□□□ 0.13
PTPRE-201ENST00000254667 FAM209BQ5JX69 171 aa15.87■□□□□ 0.13
PTPRE-201ENST00000254667 RAB37Q96AX2 223 aa15.87■□□□□ 0.13
PTPRE-201ENST00000254667 PEX7O00628 323 aa15.87■□□□□ 0.13
PTPRE-201ENST00000254667 FMC1Q96HJ9 113 aa15.87■□□□□ 0.13
PTPRE-201ENST00000254667 WNT10AQ9GZT5 417 aa15.87■□□□□ 0.13
PTPRE-201ENST00000254667 H7C1H1 209 aa15.86■□□□□ 0.13
PTPRE-201ENST00000254667 HLA-DRB1P01911 266 aa15.86■□□□□ 0.13
PTPRE-201ENST00000254667 SGK494Q96LW2 274 aa15.86■□□□□ 0.13
PTPRE-201ENST00000254667 NPFFR1Q9GZQ6 430 aa15.86■□□□□ 0.13
PTPRE-201ENST00000254667 ZNF319Q9P2F9 582 aa15.86■□□□□ 0.13
PTPRE-201ENST00000254667 SIGLEC5O15389 551 aa15.86■□□□□ 0.13
PTPRE-201ENST00000254667 CGAP01215 116 aa15.86■□□□□ 0.13
PTPRE-201ENST00000254667 ERASQ7Z444 233 aa15.86■□□□□ 0.13
PTPRE-201ENST00000254667 NABP1Q96AH0 204 aa15.86■□□□□ 0.13
PTPRE-201ENST00000254667 SCN5AQ14524 2016 aa15.86■□□□□ 0.13
PTPRE-201ENST00000254667 ZNF98A6NK75 572 aa15.85■□□□□ 0.13
PTPRE-201ENST00000254667 COX6CP09669 75 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms