RNA–Protein interactions for RNA: ENST00000254325.8

RFX1-201, Transcript of regulatory factor X1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX1, Length 4,332 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-201ENST00000254325 A0A1W2PRF3 423 aa12.92□□□□□ -0.34
RFX1-201ENST00000254325 A0A1W2PRM7 423 aa12.92□□□□□ -0.34
RFX1-201ENST00000254325 ZNF320A2RRD8 509 aa12.92□□□□□ -0.34
RFX1-201ENST00000254325 FAM157AC9JC47 383 aa12.92□□□□□ -0.34
RFX1-201ENST00000254325 IGKV1D-33P01593 117 aa12.92□□□□□ -0.34
RFX1-201ENST00000254325 IGKV1-33P01594 117 aa12.92□□□□□ -0.34
RFX1-201ENST00000254325 IGFBP2P18065 325 aa12.92□□□□□ -0.34
RFX1-201ENST00000254325 LYPD2Q6UXB3 125 aa12.92□□□□□ -0.34
RFX1-201ENST00000254325 HEPN1Q6WQI6 88 aa12.92□□□□□ -0.34
RFX1-201ENST00000254325 SSX7Q7RTT5 188 aa12.92□□□□□ -0.34
RFX1-201ENST00000254325 TSTD3H0UI37 97 aa12.91□□□□□ -0.34
RFX1-201ENST00000254325 USF1P22415 310 aaPredicted RBP12.91□□□□□ -0.34
RFX1-201ENST00000254325 TOLLIPQ9H0E2 274 aa12.91□□□□□ -0.34
RFX1-201ENST00000254325 BPIFB3P59826 476 aa12.91□□□□□ -0.34
RFX1-201ENST00000254325 WDR25Q64LD2 544 aaPredicted RBP12.91□□□□□ -0.34
RFX1-201ENST00000254325 CYP2G1PQ6ZSU1 146 aa12.91□□□□□ -0.34
RFX1-201ENST00000254325 OR5B3Q8NH48 314 aa12.91□□□□□ -0.34
RFX1-201ENST00000254325 CLN5O75503 358 aa12.91□□□□□ -0.34
RFX1-201ENST00000254325 IGHV3-48P01763 117 aa12.91□□□□□ -0.34
RFX1-201ENST00000254325 IGKV1-16P04430 117 aa12.91□□□□□ -0.34
RFX1-201ENST00000254325 MC5RP33032 325 aa12.91□□□□□ -0.34
RFX1-201ENST00000254325 LGALS4P56470 323 aa12.91□□□□□ -0.34
RFX1-201ENST00000254325 SLC25A48Q6ZT89 311 aaKnown RBP12.91□□□□□ -0.34
RFX1-201ENST00000254325 RALYQ9UKM9 306 aaKnown RBP12.91□□□□□ -0.34
RFX1-201ENST00000254325 E7EQL1 145 aa12.9□□□□□ -0.34
RFX1-201ENST00000254325 ITGB1BP1O14713 200 aa12.9□□□□□ -0.34
RFX1-201ENST00000254325 BATFQ16520 125 aa12.9□□□□□ -0.34
RFX1-201ENST00000254325 TIGITQ495A1 244 aa12.9□□□□□ -0.34
RFX1-201ENST00000254325 OR2T10Q8NGZ9 312 aa12.9□□□□□ -0.34
RFX1-201ENST00000254325 GAR1Q9NY12 217 aaKnown RBP12.9□□□□□ -0.34
RFX1-201ENST00000254325 CFAP54Q96N23 3096 aa12.9□□□□□ -0.34
RFX1-201ENST00000254325 YIF1AO95070 293 aa12.9□□□□□ -0.34
RFX1-201ENST00000254325 CT45A6P0DMU7 189 aa12.9□□□□□ -0.34
RFX1-201ENST00000254325 CT45A5P0DMU8 189 aa12.9□□□□□ -0.34
RFX1-201ENST00000254325 CT45A7P0DMV0 189 aa12.9□□□□□ -0.34
RFX1-201ENST00000254325 ATP5G3P48201 142 aa12.9□□□□□ -0.34
RFX1-201ENST00000254325 ZNF90Q03938 601 aa12.9□□□□□ -0.34
RFX1-201ENST00000254325 SPNS3Q6ZMD2 512 aa12.9□□□□□ -0.34
RFX1-201ENST00000254325 TMEM37Q8WXS4 190 aa12.9□□□□□ -0.34
RFX1-201ENST00000254325 FAM122AQ96E09 287 aa12.9□□□□□ -0.34
RFX1-201ENST00000254325 FOXA2Q9Y261 457 aaPredicted RBP12.9□□□□□ -0.34
RFX1-201ENST00000254325 COL27A1Q8IZC6 1860 aaPredicted RBP12.9□□□□□ -0.34
RFX1-201ENST00000254325 BRWD1-AS2P59051 145 aa12.9□□□□□ -0.34
RFX1-201ENST00000254325 FAM90A2PQ658T7 463 aa12.9□□□□□ -0.34
RFX1-201ENST00000254325 ANAPC16Q96DE5 110 aa12.9□□□□□ -0.34
RFX1-201ENST00000254325 BTF3L4Q96K17 158 aa12.9□□□□□ -0.34
RFX1-201ENST00000254325 NCOR1P1Q9H4R4 102 aa12.9□□□□□ -0.34
RFX1-201ENST00000254325 CHD3Q12873 2000 aaKnown RBP12.89□□□□□ -0.35
RFX1-201ENST00000254325 GGTLC1Q9BX51 225 aa12.89□□□□□ -0.35
RFX1-201ENST00000254325 TMEM167BQ9NRX6 74 aa12.89□□□□□ -0.35
RFX1-201ENST00000254325 FAM209BQ5JX69 171 aa12.89□□□□□ -0.35
RFX1-201ENST00000254325 OR51G1Q8NGK1 321 aa12.89□□□□□ -0.35
RFX1-201ENST00000254325 FAM222BQ8WU58 562 aa12.89□□□□□ -0.35
RFX1-201ENST00000254325 IGF2RP11717 2491 aa12.89□□□□□ -0.35
RFX1-201ENST00000254325 DLL1O00548 723 aa12.89□□□□□ -0.35
RFX1-201ENST00000254325 REG1AP05451 166 aa12.89□□□□□ -0.35
RFX1-201ENST00000254325 HCP5Q6MZN7 132 aa12.89□□□□□ -0.35
RFX1-201ENST00000254325 NABP2Q9BQ15 211 aa12.89□□□□□ -0.35
RFX1-201ENST00000254325 PPIAL4CA0A0B4J2A2 164 aa12.89□□□□□ -0.35
RFX1-201ENST00000254325 THBDP07204 575 aa12.89□□□□□ -0.35
RFX1-201ENST00000254325 PPIAL4GP0DN37 164 aa12.89□□□□□ -0.35
RFX1-201ENST00000254325 FOLR2P14207 255 aa12.89□□□□□ -0.35
RFX1-201ENST00000254325 TDGF1P3P51864 188 aa12.89□□□□□ -0.35
RFX1-201ENST00000254325 Q8NA96 180 aa12.89□□□□□ -0.35
RFX1-201ENST00000254325 AMMECR1Q9Y4X0 333 aaPredicted RBP12.89□□□□□ -0.35
RFX1-201ENST00000254325 OR10J4P0C629 311 aa12.88□□□□□ -0.35
RFX1-201ENST00000254325 GATA2P23769 480 aaPredicted RBP12.88□□□□□ -0.35
RFX1-201ENST00000254325 UBE2L3P68036 154 aaKnown RBP12.88□□□□□ -0.35
RFX1-201ENST00000254325 PRCDQ00LT1 54 aa12.88□□□□□ -0.35
RFX1-201ENST00000254325 ELOBQ15370 118 aa12.88□□□□□ -0.35
RFX1-201ENST00000254325 TEX36Q5VZQ5 186 aa12.88□□□□□ -0.35
RFX1-201ENST00000254325 OR10W1Q8NGF6 305 aa12.88□□□□□ -0.35
RFX1-201ENST00000254325 MGST2Q99735 147 aa12.88□□□□□ -0.35
RFX1-201ENST00000254325 MSRB2Q9Y3D2 182 aa12.88□□□□□ -0.35
RFX1-201ENST00000254325 CELSR3Q9NYQ7 3312 aa12.88□□□□□ -0.35
RFX1-201ENST00000254325 IGHV3-21A0A0B4J1V1 117 aa12.88□□□□□ -0.35
RFX1-201ENST00000254325 GCHFRP30047 84 aa12.88□□□□□ -0.35
RFX1-201ENST00000254325 ERVFC1-1P60608 527 aa12.88□□□□□ -0.35
RFX1-201ENST00000254325 PROP1O75360 226 aa12.88□□□□□ -0.35
RFX1-201ENST00000254325 ORM2P19652 201 aa12.88□□□□□ -0.35
RFX1-201ENST00000254325 SEBOXQ9HB31 216 aaPredicted RBP12.88□□□□□ -0.35
RFX1-201ENST00000254325 MALRD1Q5VYJ5 2156 aa12.87□□□□□ -0.35
RFX1-201ENST00000254325 TEX50A0A1B0GTY4 177 aa12.87□□□□□ -0.35
RFX1-201ENST00000254325 C1QTNF9BB2RNN3 333 aa12.87□□□□□ -0.35
RFX1-201ENST00000254325 CD81P60033 236 aa12.87□□□□□ -0.35
RFX1-201ENST00000254325 PAX5Q02548 391 aa12.87□□□□□ -0.35
RFX1-201ENST00000254325 PDPNQ86YL7 162 aa12.87□□□□□ -0.35
RFX1-201ENST00000254325 ZCCHC14Q8WYQ9 949 aaKnown RBP12.87□□□□□ -0.35
RFX1-201ENST00000254325 PLAUP00749 431 aa12.87□□□□□ -0.35
RFX1-201ENST00000254325 VDAC2P45880 294 aaPredicted RBP12.87□□□□□ -0.35
RFX1-201ENST00000254325 RPL27AP46776 148 aaKnown RBP12.87□□□□□ -0.35
RFX1-201ENST00000254325 RPL23P62829 140 aaKnown RBP12.87□□□□□ -0.35
RFX1-201ENST00000254325 OR4X1Q8NH49 305 aa12.87□□□□□ -0.35
RFX1-201ENST00000254325 CXCL1P09341 107 aa12.87□□□□□ -0.35
RFX1-201ENST00000254325 PAX6P26367 422 aa12.87□□□□□ -0.35
RFX1-201ENST00000254325 ETFRF1Q6IPR1 90 aa12.87□□□□□ -0.35
RFX1-201ENST00000254325 OR10D4PQ8NGN7 298 aa12.87□□□□□ -0.35
RFX1-201ENST00000254325 COL25A1Q9BXS0 654 aaPredicted RBP12.87□□□□□ -0.35
RFX1-201ENST00000254325 ANKHD1Q8IWZ3 2542 aaKnown RBP12.87□□□□□ -0.35
RFX1-201ENST00000254325 AKAP6Q13023 2319 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms