RNA–Protein interactions for RNA: ENST00000248054.9

SIN3B-201, Transcript of SIN3 transcription regulator family member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SIN3B, Length 5,037 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-201ENST00000248054 CEACAM18A8MTB9 384 aa13.26□□□□□ -0.29
SIN3B-201ENST00000248054 MFAP2P55001 183 aa13.26□□□□□ -0.29
SIN3B-201ENST00000248054 WDR82Q6UXN9 313 aa13.26□□□□□ -0.29
SIN3B-201ENST00000248054 ZNF430Q9H8G1 570 aaPredicted RBP13.26□□□□□ -0.29
SIN3B-201ENST00000248054 LINC00312Q9Y6C7 94 aa13.26□□□□□ -0.29
SIN3B-201ENST00000248054 REG1BP48304 166 aa13.26□□□□□ -0.29
SIN3B-201ENST00000248054 OR8I2Q8N0Y5 310 aa13.26□□□□□ -0.29
SIN3B-201ENST00000248054 PROK2Q9HC23 129 aa13.26□□□□□ -0.29
SIN3B-201ENST00000248054 TBR1Q16650 682 aa13.25□□□□□ -0.29
SIN3B-201ENST00000248054 ZNRF1Q8ND25 227 aa13.25□□□□□ -0.29
SIN3B-201ENST00000248054 OSR1Q8TAX0 266 aaPredicted RBP13.25□□□□□ -0.29
SIN3B-201ENST00000248054 SPTA1P02549 2419 aa13.25□□□□□ -0.29
SIN3B-201ENST00000248054 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.25□□□□□ -0.29
SIN3B-201ENST00000248054 AMY1AP04745 511 aa13.25□□□□□ -0.29
SIN3B-201ENST00000248054 TDGF1P13385 188 aa13.25□□□□□ -0.29
SIN3B-201ENST00000248054 IFITM10A6NMD0 228 aa13.25□□□□□ -0.29
SIN3B-201ENST00000248054 QRFPP83859 136 aa13.25□□□□□ -0.29
SIN3B-201ENST00000248054 UQCR10Q9UDW1 63 aa13.25□□□□□ -0.29
SIN3B-201ENST00000248054 CSN3P07498 182 aa13.25□□□□□ -0.29
SIN3B-201ENST00000248054 TFPI2P48307 235 aa13.25□□□□□ -0.29
SIN3B-201ENST00000248054 LHFPL1Q86WI0 220 aa13.25□□□□□ -0.29
SIN3B-201ENST00000248054 TCF19Q9Y242 345 aa13.25□□□□□ -0.29
SIN3B-201ENST00000248054 K7ERU9 68 aa13.24□□□□□ -0.29
SIN3B-201ENST00000248054 FAM106CPP0CH98 169 aa13.24□□□□□ -0.29
SIN3B-201ENST00000248054 RNF138Q8WVD3 245 aa13.24□□□□□ -0.29
SIN3B-201ENST00000248054 QTRT1Q9BXR0 403 aaKnown RBP13.24□□□□□ -0.29
SIN3B-201ENST00000248054 LPAR2Q9HBW0 351 aa13.24□□□□□ -0.29
SIN3B-201ENST00000248054 AURKAIP1Q9NWT8 199 aaPredicted RBP13.24□□□□□ -0.29
SIN3B-201ENST00000248054 DOCK9Q9BZ29 2069 aa13.24□□□□□ -0.29
SIN3B-201ENST00000248054 TRAV24A0A0B4J272 114 aa13.24□□□□□ -0.29
SIN3B-201ENST00000248054 CIDEAO60543 219 aa13.24□□□□□ -0.29
SIN3B-201ENST00000248054 YPEL1O60688 119 aa13.24□□□□□ -0.29
SIN3B-201ENST00000248054 DNLZQ5SXM8 178 aa13.24□□□□□ -0.29
SIN3B-201ENST00000248054 RTN4RL2Q86UN3 420 aa13.24□□□□□ -0.29
SIN3B-201ENST00000248054 TEX29Q8N6K0 151 aa13.24□□□□□ -0.29
SIN3B-201ENST00000248054 LRTM2Q8N967 370 aa13.24□□□□□ -0.29
SIN3B-201ENST00000248054 OR13A1Q8NGR1 328 aa13.24□□□□□ -0.29
SIN3B-201ENST00000248054 YPEL2Q96QA6 119 aa13.24□□□□□ -0.29
SIN3B-201ENST00000248054 IGKV1-12A0A0C4DH73 117 aa13.24□□□□□ -0.29
SIN3B-201ENST00000248054 IGKV1D-12P01611 117 aa13.24□□□□□ -0.29
SIN3B-201ENST00000248054 C8orf88P0DMB2 117 aa13.24□□□□□ -0.29
SIN3B-201ENST00000248054 COX6B1P14854 86 aa13.24□□□□□ -0.29
SIN3B-201ENST00000248054 LINC01560Q8TB33 94 aa13.24□□□□□ -0.29
SIN3B-201ENST00000248054 PLPPR1Q8TBJ4 325 aa13.24□□□□□ -0.29
SIN3B-201ENST00000248054 FOXG1P55316 489 aaPredicted RBP13.24□□□□□ -0.29
SIN3B-201ENST00000248054 RPS20P60866 119 aaKnown RBP13.24□□□□□ -0.29
SIN3B-201ENST00000248054 SPATA45Q537H7 98 aa13.24□□□□□ -0.29
SIN3B-201ENST00000248054 C12orf54Q6X4T0 127 aa13.24□□□□□ -0.29
SIN3B-201ENST00000248054 ASCL4Q6XD76 172 aa13.24□□□□□ -0.29
SIN3B-201ENST00000248054 PIP4P1Q86T03 277 aa13.24□□□□□ -0.29
SIN3B-201ENST00000248054 MYOZ3Q8TDC0 251 aa13.24□□□□□ -0.29
SIN3B-201ENST00000248054 LRRK1Q38SD2 2015 aa13.24□□□□□ -0.29
SIN3B-201ENST00000248054 TRAV9-1A0A075B6T8 112 aa13.23□□□□□ -0.29
SIN3B-201ENST00000248054 LOC105371242A0A075B767 164 aa13.23□□□□□ -0.29
SIN3B-201ENST00000248054 A0A1W2PRD5 423 aa13.23□□□□□ -0.29
SIN3B-201ENST00000248054 A0A1W2PRF3 423 aa13.23□□□□□ -0.29
SIN3B-201ENST00000248054 A0A1W2PRM7 423 aa13.23□□□□□ -0.29
SIN3B-201ENST00000248054 F5H697 171 aa13.23□□□□□ -0.29
SIN3B-201ENST00000248054 GZMBP10144 247 aa13.23□□□□□ -0.29
SIN3B-201ENST00000248054 SRSF4Q08170 494 aaKnown RBP13.23□□□□□ -0.29
SIN3B-201ENST00000248054 ZNF788Q6ZQV5 615 aa13.23□□□□□ -0.29
SIN3B-201ENST00000248054 C18orf12Q96KH6 178 aa13.23□□□□□ -0.29
SIN3B-201ENST00000248054 PIMREGQ9BSJ6 248 aa13.23□□□□□ -0.29
SIN3B-201ENST00000248054 IL36RNQ9UBH0 155 aa13.23□□□□□ -0.29
SIN3B-201ENST00000248054 SH2D7A6NKC9 451 aaPredicted RBP13.23□□□□□ -0.29
SIN3B-201ENST00000248054 LINC00869P0C866 280 aa13.23□□□□□ -0.29
SIN3B-201ENST00000248054 UNQ6494/PRO21346Q6UXR6 183 aa13.23□□□□□ -0.29
SIN3B-201ENST00000248054 FAM157AC9JC47 383 aa13.23□□□□□ -0.29
SIN3B-201ENST00000248054 DTX1Q86Y01 620 aa13.23□□□□□ -0.29
SIN3B-201ENST00000248054 SNHG12Q9BXW3 62 aa13.23□□□□□ -0.29
SIN3B-201ENST00000248054 SLC25A15Q9Y619 301 aa13.23□□□□□ -0.29
SIN3B-201ENST00000248054 TRBV6-6A0A0A6YYG2 114 aa13.23□□□□□ -0.29
SIN3B-201ENST00000248054 PDLIM4P50479 330 aa13.23□□□□□ -0.29
SIN3B-201ENST00000248054 TDGF1P3P51864 188 aa13.23□□□□□ -0.29
SIN3B-201ENST00000248054 IGFL3Q6UXB1 125 aa13.23□□□□□ -0.29
SIN3B-201ENST00000248054 NPSP0C0P6 89 aa13.22□□□□□ -0.29
SIN3B-201ENST00000248054 LRRC75BQ2VPJ9 315 aa13.22□□□□□ -0.29
SIN3B-201ENST00000248054 MRPL18Q9H0U6 180 aaKnown RBP13.22□□□□□ -0.29
SIN3B-201ENST00000248054 FOXF2Q12947 444 aa13.22□□□□□ -0.29
SIN3B-201ENST00000248054 PARLQ9H300 379 aa13.22□□□□□ -0.29
SIN3B-201ENST00000248054 CA7P43166 264 aa13.22□□□□□ -0.29
SIN3B-201ENST00000248054 MAJINQ3KP22 176 aa13.22□□□□□ -0.29
SIN3B-201ENST00000248054 ALKBH7Q9BT30 221 aaPredicted RBP13.22□□□□□ -0.29
SIN3B-201ENST00000248054 RAXQ9Y2V3 346 aa13.22□□□□□ -0.29
SIN3B-201ENST00000248054 UFC1Q9Y3C8 167 aa13.22□□□□□ -0.29
SIN3B-201ENST00000248054 TRAV30A0A087WSZ9 112 aa13.22□□□□□ -0.29
SIN3B-201ENST00000248054 ZG16O60844 167 aa13.22□□□□□ -0.29
SIN3B-201ENST00000248054 FOXH1O75593 365 aa13.22□□□□□ -0.29
SIN3B-201ENST00000248054 Q6ZS49 121 aa13.22□□□□□ -0.29
SIN3B-201ENST00000248054 MIEN1Q9BRT3 115 aa13.22□□□□□ -0.29
SIN3B-201ENST00000248054 IGKV1-27A0A075B6S5 117 aa13.21□□□□□ -0.29
SIN3B-201ENST00000248054 RBFOX2O43251 390 aaKnown RBP eCLIP13.21□□□□□ -0.291e-6■■■■□ 25
SIN3B-201ENST00000248054 CCL20P78556 96 aa13.21□□□□□ -0.29
SIN3B-201ENST00000248054 TMUB1Q9BVT8 246 aa13.21□□□□□ -0.29
SIN3B-201ENST00000248054 BTF3P20290 206 aaKnown RBP13.21□□□□□ -0.29
SIN3B-201ENST00000248054 OR4A47Q6IF82 309 aa13.21□□□□□ -0.29
SIN3B-201ENST00000248054 CYP2G1PQ6ZSU1 146 aa13.21□□□□□ -0.29
SIN3B-201ENST00000248054 FAM222BQ8WU58 562 aa13.21□□□□□ -0.29
SIN3B-201ENST00000248054 GATAD1Q8WUU5 269 aa13.21□□□□□ -0.29
SIN3B-201ENST00000248054 GPHA2Q96T91 129 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms