RNA–Protein interactions for RNA: ENST00000241393.3

CXCR4-201, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CXCR4, Length 1,682 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-201ENST00000241393 ZNF318Q5VUA4 2279 aa6.42□□□□□ -1.38
CXCR4-201ENST00000241393 TRGV8A0A0C4DH27 118 aa6.42□□□□□ -1.38
CXCR4-201ENST00000241393 KRTAP4-8A0A0G2JLE6 195 aa6.42□□□□□ -1.38
CXCR4-201ENST00000241393 GAGE12JA6NER3 117 aa6.42□□□□□ -1.38
CXCR4-201ENST00000241393 C17orf100A8MU93 164 aa6.42□□□□□ -1.38
CXCR4-201ENST00000241393 CLN5O75503 358 aa6.42□□□□□ -1.38
CXCR4-201ENST00000241393 SCGB1D1O95968 90 aa6.42□□□□□ -1.38
CXCR4-201ENST00000241393 CD55P08174 381 aa6.42□□□□□ -1.38
CXCR4-201ENST00000241393 S100PP25815 95 aa6.42□□□□□ -1.38
CXCR4-201ENST00000241393 ARL3P36405 182 aa6.42□□□□□ -1.38
CXCR4-201ENST00000241393 SELENOVP59797 346 aa6.42□□□□□ -1.38
CXCR4-201ENST00000241393 EDDM3AQ14507 147 aa6.42□□□□□ -1.38
CXCR4-201ENST00000241393 DNLZQ5SXM8 178 aa6.42□□□□□ -1.38
CXCR4-201ENST00000241393 C1orf185Q5T7R7 199 aa6.42□□□□□ -1.38
CXCR4-201ENST00000241393 PRAMEF5Q5TYX0 476 aa6.42□□□□□ -1.38
CXCR4-201ENST00000241393 ZNF343Q6P1L6 599 aa6.42□□□□□ -1.38
CXCR4-201ENST00000241393 Q6ZS92 163 aa6.42□□□□□ -1.38
CXCR4-201ENST00000241393 TGIF2LYQ8IUE0 185 aa6.42□□□□□ -1.38
CXCR4-201ENST00000241393 OR4A16Q8NH70 328 aa6.42□□□□□ -1.38
CXCR4-201ENST00000241393 OR4S2Q8NH73 311 aa6.42□□□□□ -1.38
CXCR4-201ENST00000241393 RFESDQ8TAC1 157 aa6.42□□□□□ -1.38
CXCR4-201ENST00000241393 S1PR3Q99500 378 aa6.42□□□□□ -1.38
CXCR4-201ENST00000241393 PYGO2Q9BRQ0 406 aa6.42□□□□□ -1.38
CXCR4-201ENST00000241393 SFXN3Q9BWM7 321 aa6.42□□□□□ -1.38
CXCR4-201ENST00000241393 FAM234AQ9H0X4 552 aa6.42□□□□□ -1.38
CXCR4-201ENST00000241393 IFI27L2Q9H2X8 130 aa6.42□□□□□ -1.38
CXCR4-201ENST00000241393 OR51M1Q9H341 326 aa6.42□□□□□ -1.38
CXCR4-201ENST00000241393 LINC00574Q9H8X3 128 aa6.42□□□□□ -1.38
CXCR4-201ENST00000241393 FZR1Q9UM11 496 aa6.42□□□□□ -1.38
CXCR4-201ENST00000241393 CHD3Q12873 2000 aaKnown RBP6.42□□□□□ -1.38
CXCR4-201ENST00000241393 TGIF2-C20orf24A0A0A6YYL0 155 aa6.42□□□□□ -1.38
CXCR4-201ENST00000241393 IGHV3-43A0A0B4J1X8 118 aa6.42□□□□□ -1.38
CXCR4-201ENST00000241393 FNDC10F2Z333 226 aa6.42□□□□□ -1.38
CXCR4-201ENST00000241393 M0R1X1 148 aa6.42□□□□□ -1.38
CXCR4-201ENST00000241393 FCGR3BO75015 233 aa6.42□□□□□ -1.38
CXCR4-201ENST00000241393 CRYABP02511 175 aaKnown RBP6.42□□□□□ -1.38
CXCR4-201ENST00000241393 OR9G9P0C7N8 305 aa6.42□□□□□ -1.38
CXCR4-201ENST00000241393 IGHV3-43DP0DP04 118 aa6.42□□□□□ -1.38
CXCR4-201ENST00000241393 CD1BP29016 333 aa6.42□□□□□ -1.38
CXCR4-201ENST00000241393 OPRK1P41145 380 aa6.42□□□□□ -1.38
CXCR4-201ENST00000241393 VDAC2P45880 294 aaPredicted RBP6.42□□□□□ -1.38
CXCR4-201ENST00000241393 CDC34P49427 236 aaPredicted RBP6.42□□□□□ -1.38
CXCR4-201ENST00000241393 THBS3P49746 956 aa6.42□□□□□ -1.38
CXCR4-201ENST00000241393 TFF3Q07654 80 aa6.42□□□□□ -1.38
CXCR4-201ENST00000241393 POU2AF1Q16633 256 aa6.42□□□□□ -1.38
CXCR4-201ENST00000241393 SERTAD4-AS1Q5TG53 156 aa6.42□□□□□ -1.38
CXCR4-201ENST00000241393 MORN5Q5VZ52 161 aa6.42□□□□□ -1.38
CXCR4-201ENST00000241393 FAM53AQ6NSI3 398 aaPredicted RBP6.42□□□□□ -1.38
CXCR4-201ENST00000241393 Q8N7P7 452 aa6.42□□□□□ -1.38
CXCR4-201ENST00000241393 TPRX1Q8N7U7 411 aa6.42□□□□□ -1.38
CXCR4-201ENST00000241393 NANPQ8TBE9 248 aa6.42□□□□□ -1.38
CXCR4-201ENST00000241393 DDB2Q92466 427 aa6.42□□□□□ -1.38
CXCR4-201ENST00000241393 SDSLQ96GA7 329 aa6.42□□□□□ -1.38
CXCR4-201ENST00000241393 BTF3L4Q96K17 158 aa6.42□□□□□ -1.38
CXCR4-201ENST00000241393 OR2V2Q96R30 315 aa6.42□□□□□ -1.38
CXCR4-201ENST00000241393 QTRT1Q9BXR0 403 aaKnown RBP6.42□□□□□ -1.38
CXCR4-201ENST00000241393 SLC25A22Q9H936 323 aa6.42□□□□□ -1.38
CXCR4-201ENST00000241393 CALYQ9NYX4 217 aa6.42□□□□□ -1.38
CXCR4-201ENST00000241393 DOK5Q9P104 306 aa6.42□□□□□ -1.38
CXCR4-201ENST00000241393 CACNA1DQ01668 2161 aa6.42□□□□□ -1.38
CXCR4-201ENST00000241393 MUC3AQ02505 3323 aa6.42□□□□□ -1.38
CXCR4-201ENST00000241393 PTPRBP23467 1997 aa6.41□□□□□ -1.38
CXCR4-201ENST00000241393 INTS1Q8N201 2190 aaKnown RBP6.41□□□□□ -1.38
CXCR4-201ENST00000241393 URB1O60287 2271 aaKnown RBP6.41□□□□□ -1.38
CXCR4-201ENST00000241393 OTOGLQ3ZCN5 2332 aa6.41□□□□□ -1.38
CXCR4-201ENST00000241393 KBTBD11-OT1A0A1B0GTJ5 212 aa6.41□□□□□ -1.38
CXCR4-201ENST00000241393 F6UZH7 168 aa6.41□□□□□ -1.38
CXCR4-201ENST00000241393 M0R1B8 84 aa6.41□□□□□ -1.38
CXCR4-201ENST00000241393 PDE6DO43924 150 aa6.41□□□□□ -1.38
CXCR4-201ENST00000241393 HIST1H2BKO60814 126 aa6.41□□□□□ -1.38
CXCR4-201ENST00000241393 HIST1H2BJP06899 126 aa6.41□□□□□ -1.38
CXCR4-201ENST00000241393 PFN1P07737 140 aaKnown RBP6.41□□□□□ -1.38
CXCR4-201ENST00000241393 CD99P14209 185 aa6.41□□□□□ -1.38
CXCR4-201ENST00000241393 HIST1H2BOP23527 126 aa6.41□□□□□ -1.38
CXCR4-201ENST00000241393 S100A2P29034 98 aa6.41□□□□□ -1.38
CXCR4-201ENST00000241393 CEACAM8P31997 349 aaPredicted RBP6.41□□□□□ -1.38
CXCR4-201ENST00000241393 HIST1H2BBP33778 126 aa6.41□□□□□ -1.38
CXCR4-201ENST00000241393 ZNF83P51522 516 aa6.41□□□□□ -1.38
CXCR4-201ENST00000241393 ATP5IP56385 69 aaPredicted RBP6.41□□□□□ -1.38
CXCR4-201ENST00000241393 HIST1H2BDP58876 126 aa6.41□□□□□ -1.38
CXCR4-201ENST00000241393 HIST1H2BCP62807 126 aa6.41□□□□□ -1.38
CXCR4-201ENST00000241393 HIST2H2BEQ16778 126 aa6.41□□□□□ -1.38
CXCR4-201ENST00000241393 BSXQ3C1V8 233 aa6.41□□□□□ -1.38
CXCR4-201ENST00000241393 KRTCAP3Q53RY4 240 aa6.41□□□□□ -1.38
CXCR4-201ENST00000241393 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.41□□□□□ -1.38
CXCR4-201ENST00000241393 SSX8Q7RTT4 187 aa6.41□□□□□ -1.38
CXCR4-201ENST00000241393 HIST1H2BHQ93079 126 aa6.41□□□□□ -1.38
CXCR4-201ENST00000241393 HIST1H2BNQ99877 126 aa6.41□□□□□ -1.38
CXCR4-201ENST00000241393 HIST1H2BMQ99879 126 aa6.41□□□□□ -1.38
CXCR4-201ENST00000241393 SSX3Q99909 188 aa6.41□□□□□ -1.38
CXCR4-201ENST00000241393 DCTN5Q9BTE1 182 aa6.41□□□□□ -1.38
CXCR4-201ENST00000241393 PARLQ9H300 379 aa6.41□□□□□ -1.38
CXCR4-201ENST00000241393 AAMDCQ9H7C9 122 aa6.41□□□□□ -1.38
CXCR4-201ENST00000241393 SRD5A3Q9H8P0 318 aa6.41□□□□□ -1.38
CXCR4-201ENST00000241393 NIT2Q9NQR4 276 aa6.41□□□□□ -1.38
CXCR4-201ENST00000241393 RNF7Q9UBF6 113 aa6.41□□□□□ -1.38
CXCR4-201ENST00000241393 IL19Q9UHD0 177 aa6.41□□□□□ -1.38
CXCR4-201ENST00000241393 FAM215AQ9Y5M1 114 aa6.41□□□□□ -1.38
CXCR4-201ENST00000241393 URGCP-MRPS24S4R325 110 aa6.41□□□□□ -1.38
CXCR4-201ENST00000241393 DEFB108AA8MXU0 73 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms