RNA–Protein interactions for RNA: ENST00000240185.7

TARDBP-201, Transcript of TAR DNA binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARDBP, Length 5,367 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-201ENST00000240185 TDHQ8IZJ6 230 aa11.77□□□□□ -0.53
TARDBP-201ENST00000240185 DEFB124Q8NES8 71 aa11.77□□□□□ -0.53
TARDBP-201ENST00000240185 TRAV14DV4A0A0A6YYC5 116 aa11.77□□□□□ -0.53
TARDBP-201ENST00000240185 ZFP36L2P47974 494 aaKnown RBP11.77□□□□□ -0.53
TARDBP-201ENST00000240185 TTTY12Q9BZ98 90 aa11.77□□□□□ -0.53
TARDBP-201ENST00000240185 ST20Q9HBF5 79 aa11.77□□□□□ -0.53
TARDBP-201ENST00000240185 SHISA3A0PJX4 238 aa11.76□□□□□ -0.53
TARDBP-201ENST00000240185 GFI1BQ5VTD9 330 aa11.76□□□□□ -0.53
TARDBP-201ENST00000240185 LILRA6Q6PI73 481 aa11.76□□□□□ -0.53
TARDBP-201ENST00000240185 ZNF562Q6V9R5 426 aa11.76□□□□□ -0.53
TARDBP-201ENST00000240185 HIST3H2BBQ8N257 126 aa11.76□□□□□ -0.53
TARDBP-201ENST00000240185 OR52E5Q8NH55 327 aa11.76□□□□□ -0.53
TARDBP-201ENST00000240185 OR9G1Q8NH87 305 aa11.76□□□□□ -0.53
TARDBP-201ENST00000240185 TMEM186Q96B77 213 aa11.76□□□□□ -0.53
TARDBP-201ENST00000240185 BTAF1O14981 1849 aa11.76□□□□□ -0.53
TARDBP-201ENST00000240185 NDUFS6O75380 124 aaKnown RBP11.76□□□□□ -0.53
TARDBP-201ENST00000240185 PLNP26678 52 aa11.76□□□□□ -0.53
TARDBP-201ENST00000240185 ASPHD2Q6ICH7 369 aa11.76□□□□□ -0.53
TARDBP-201ENST00000240185 SHISA5Q8N114 240 aa11.76□□□□□ -0.53
TARDBP-201ENST00000240185 ATXN8Q156A1 80 aa11.76□□□□□ -0.53
TARDBP-201ENST00000240185 TMEM155Q4W5P6 130 aa11.76□□□□□ -0.53
TARDBP-201ENST00000240185 HEPN1Q6WQI6 88 aa11.76□□□□□ -0.53
TARDBP-201ENST00000240185 OR10W1Q8NGF6 305 aa11.76□□□□□ -0.53
TARDBP-201ENST00000240185 GDF15Q99988 308 aa11.76□□□□□ -0.53
TARDBP-201ENST00000240185 GGTLC3B5MD39 225 aa11.76□□□□□ -0.53
TARDBP-201ENST00000240185 CRYBA2P53672 197 aa11.76□□□□□ -0.53
TARDBP-201ENST00000240185 RNF182Q8N6D2 247 aa11.76□□□□□ -0.53
TARDBP-201ENST00000240185 TMEM171Q8WVE6 324 aa11.76□□□□□ -0.53
TARDBP-201ENST00000240185 CACNA1SQ13698 1873 aa11.76□□□□□ -0.53
TARDBP-201ENST00000240185 PEBP1P30086 187 aaKnown RBP11.75□□□□□ -0.53
TARDBP-201ENST00000240185 IGKV3D-20A0A0C4DH25 116 aa11.75□□□□□ -0.53
TARDBP-201ENST00000240185 MIR17HGQ75NE6 70 aa11.75□□□□□ -0.53
TARDBP-201ENST00000240185 ZNF784Q8NCA9 323 aaPredicted RBP11.75□□□□□ -0.53
TARDBP-201ENST00000240185 EEF1AKMT3Q96AZ1 226 aa11.75□□□□□ -0.53
TARDBP-201ENST00000240185 FOXD3Q9UJU5 478 aaPredicted RBP11.75□□□□□ -0.53
TARDBP-201ENST00000240185 DOPEY2Q9Y3R5 2298 aa11.75□□□□□ -0.53
TARDBP-201ENST00000240185 LAMB2P55268 1798 aa11.75□□□□□ -0.53
TARDBP-201ENST00000240185 KBTBD11-OT1A0A1B0GTJ5 212 aa11.75□□□□□ -0.53
TARDBP-201ENST00000240185 AMBPP02760 352 aa11.75□□□□□ -0.53
TARDBP-201ENST00000240185 SPEM2Q0P670 501 aa11.75□□□□□ -0.53
TARDBP-201ENST00000240185 FAM214BQ7L5A3 538 aa11.75□□□□□ -0.53
TARDBP-201ENST00000240185 NR2C2APQ86WQ0 139 aa11.75□□□□□ -0.53
TARDBP-201ENST00000240185 TRAV5A0A0B4J249 113 aa11.75□□□□□ -0.53
TARDBP-201ENST00000240185 C21orf140B9A014 251 aa11.75□□□□□ -0.53
TARDBP-201ENST00000240185 WISP3O95389 354 aaPredicted RBP11.75□□□□□ -0.53
TARDBP-201ENST00000240185 HIST1H4AP62805 103 aaKnown RBP11.75□□□□□ -0.53
TARDBP-201ENST00000240185 DCAF10Q5QP82 559 aa11.75□□□□□ -0.53
TARDBP-201ENST00000240185 DOCK2Q92608 1830 aa11.75□□□□□ -0.53
TARDBP-201ENST00000240185 IGHV3-49A0A0A0MS15 119 aa11.74□□□□□ -0.53
TARDBP-201ENST00000240185 A0A0G2JLM5 398 aa11.74□□□□□ -0.53
TARDBP-201ENST00000240185 UCP1P25874 307 aa11.74□□□□□ -0.53
TARDBP-201ENST00000240185 CCL20P78556 96 aa11.74□□□□□ -0.53
TARDBP-201ENST00000240185 SPTBP11277 2137 aa11.74□□□□□ -0.53
TARDBP-201ENST00000240185 LINC01590Q5TEZ4 76 aa11.74□□□□□ -0.53
TARDBP-201ENST00000240185 PNKDQ8N490 385 aa11.74□□□□□ -0.53
TARDBP-201ENST00000240185 APOBEC4Q8WW27 367 aaKnown RBP11.74□□□□□ -0.53
TARDBP-201ENST00000240185 SEMA5BQ9P283 1151 aa11.74□□□□□ -0.53
TARDBP-201ENST00000240185 RPL39P5Q59GN2 51 aa11.74□□□□□ -0.53
TARDBP-201ENST00000240185 OR10J3Q5JRS4 329 aa11.74□□□□□ -0.53
TARDBP-201ENST00000240185 ZNF525Q8N782 197 aa11.74□□□□□ -0.53
TARDBP-201ENST00000240185 SLC25A2Q9BXI2 301 aa11.74□□□□□ -0.53
TARDBP-201ENST00000240185 YAE1D1Q9NRH1 226 aa11.74□□□□□ -0.53
TARDBP-201ENST00000240185 A0A1B0GUL6 1792 aa11.74□□□□□ -0.53
TARDBP-201ENST00000240185 NDUFA2O43678 99 aa11.74□□□□□ -0.53
TARDBP-201ENST00000240185 SSBP2P81877 361 aaPredicted RBP11.74□□□□□ -0.53
TARDBP-201ENST00000240185 ERG28Q9UKR5 140 aa11.74□□□□□ -0.53
TARDBP-201ENST00000240185 RTTNQ86VV8 2226 aa11.74□□□□□ -0.53
TARDBP-201ENST00000240185 SPTA1P02549 2419 aa11.74□□□□□ -0.53
TARDBP-201ENST00000240185 SPINT1O43278 529 aa11.73□□□□□ -0.53
TARDBP-201ENST00000240185 GZMBP10144 247 aa11.73□□□□□ -0.53
TARDBP-201ENST00000240185 FOXL2P58012 376 aa11.73□□□□□ -0.53
TARDBP-201ENST00000240185 CFAP161Q6P656 301 aa11.73□□□□□ -0.53
TARDBP-201ENST00000240185 EDA2RQ9HAV5 297 aa11.73□□□□□ -0.53
TARDBP-201ENST00000240185 TRIP11Q15643 1979 aa11.73□□□□□ -0.53
TARDBP-201ENST00000240185 BCORQ6W2J9 1755 aa11.73□□□□□ -0.53
TARDBP-201ENST00000240185 PPIAL4CA0A0B4J2A2 164 aa11.73□□□□□ -0.53
TARDBP-201ENST00000240185 IGHV3-66A0A0C4DH42 116 aa11.73□□□□□ -0.53
TARDBP-201ENST00000240185 PPIAL4GP0DN37 164 aa11.73□□□□□ -0.53
TARDBP-201ENST00000240185 TRIP6Q15654 476 aaKnown RBP11.73□□□□□ -0.53
TARDBP-201ENST00000240185 PRR7Q8TB68 274 aa11.73□□□□□ -0.53
TARDBP-201ENST00000240185 RTBDNQ9BSG5 229 aaPredicted RBP11.73□□□□□ -0.53
TARDBP-201ENST00000240185 IGKCP01834 107 aa11.73□□□□□ -0.53
TARDBP-201ENST00000240185 ESDP10768 282 aa11.73□□□□□ -0.53
TARDBP-201ENST00000240185 TDGF1P13385 188 aa11.73□□□□□ -0.53
TARDBP-201ENST00000240185 C1orf194Q5T5A4 169 aa11.73□□□□□ -0.53
TARDBP-201ENST00000240185 ZNF48Q96MX3 618 aaPredicted RBP11.73□□□□□ -0.53
TARDBP-201ENST00000240185 TMEM74BQ9NUR3 256 aa11.73□□□□□ -0.53
TARDBP-201ENST00000240185 AKAP6Q13023 2319 aa11.73□□□□□ -0.53
TARDBP-201ENST00000240185 IFI27P40305 119 aaPredicted RBP11.73□□□□□ -0.53
TARDBP-201ENST00000240185 ERVK11-1P61568 191 aa11.73□□□□□ -0.53
TARDBP-201ENST00000240185 Q9H3A6 140 aa11.73□□□□□ -0.53
TARDBP-201ENST00000240185 COX11Q9Y6N1 276 aa11.73□□□□□ -0.53
TARDBP-201ENST00000240185 LAMB1P07942 1786 aa11.72□□□□□ -0.53
TARDBP-201ENST00000240185 NRAPQ86VF7 1730 aa11.72□□□□□ -0.53
TARDBP-201ENST00000240185 NHSQ6T4R5 1651 aa11.72□□□□□ -0.53
TARDBP-201ENST00000240185 NKX2-8O15522 239 aa11.72□□□□□ -0.53
TARDBP-201ENST00000240185 TMEM30BQ3MIR4 351 aa11.72□□□□□ -0.53
TARDBP-201ENST00000240185 MS4A6AQ9H2W1 248 aa11.72□□□□□ -0.53
TARDBP-201ENST00000240185 GATA2P23769 480 aaPredicted RBP11.72□□□□□ -0.53
TARDBP-201ENST00000240185 OR9G4Q8NGQ1 327 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms