RNA–Protein interactions for RNA: ENST00000231130.3

PCDHB3-201, Transcript of protocadherin beta 3, humanhuman

APPRIS P1 BASIC

Gene PCDHB3, Length 3,355 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3-201ENST00000231130 EDDM3AQ14507 147 aa11.8□□□□□ -0.52
PCDHB3-201ENST00000231130 TECRQ9NZ01 308 aaKnown RBP11.8□□□□□ -0.52
PCDHB3-201ENST00000231130 PSG11Q9UQ72 335 aa11.8□□□□□ -0.52
PCDHB3-201ENST00000231130 MUC15Q8N387 334 aa11.79□□□□□ -0.52
PCDHB3-201ENST00000231130 FER1L6-AS1Q8NA97 138 aa11.79□□□□□ -0.52
PCDHB3-201ENST00000231130 OR1B1Q8NGR6 318 aa11.79□□□□□ -0.52
PCDHB3-201ENST00000231130 OR8B2Q96RD0 313 aa11.79□□□□□ -0.52
PCDHB3-201ENST00000231130 DCTN5Q9BTE1 182 aa11.79□□□□□ -0.52
PCDHB3-201ENST00000231130 RNASE7Q9H1E1 156 aaKnown RBP11.79□□□□□ -0.52
PCDHB3-201ENST00000231130 ZNF331Q9NQX6 463 aaPredicted RBP11.79□□□□□ -0.52
PCDHB3-201ENST00000231130 LOC400499M0QZD8 3231 aa11.79□□□□□ -0.52
PCDHB3-201ENST00000231130 MT-CO2P00403 227 aa11.79□□□□□ -0.52
PCDHB3-201ENST00000231130 SRFP11831 508 aa11.79□□□□□ -0.52
PCDHB3-201ENST00000231130 CD1BP29016 333 aa11.79□□□□□ -0.52
PCDHB3-201ENST00000231130 C19orf35Q6ZS72 473 aa11.79□□□□□ -0.52
PCDHB3-201ENST00000231130 ABHD12Q8N2K0 398 aa11.79□□□□□ -0.52
PCDHB3-201ENST00000231130 GALMQ96C23 342 aa11.79□□□□□ -0.52
PCDHB3-201ENST00000231130 NBEAP1P0C6P0 100 aa11.79□□□□□ -0.52
PCDHB3-201ENST00000231130 NPY1RP25929 384 aa11.79□□□□□ -0.52
PCDHB3-201ENST00000231130 EPHA8P29322 1005 aaPredicted RBP11.79□□□□□ -0.52
PCDHB3-201ENST00000231130 SSTR5P35346 364 aa11.79□□□□□ -0.52
PCDHB3-201ENST00000231130 COLCA1Q6ZS62 124 aa11.79□□□□□ -0.52
PCDHB3-201ENST00000231130 SCCPDHQ8NBX0 429 aa11.79□□□□□ -0.52
PCDHB3-201ENST00000231130 NEUROG1Q92886 237 aa11.79□□□□□ -0.52
PCDHB3-201ENST00000231130 FZR1Q9UM11 496 aa11.79□□□□□ -0.52
PCDHB3-201ENST00000231130 PSPNO60542 156 aa11.78□□□□□ -0.52
PCDHB3-201ENST00000231130 CLDN14O95500 239 aa11.78□□□□□ -0.52
PCDHB3-201ENST00000231130 HAND1O96004 215 aa11.78□□□□□ -0.52
PCDHB3-201ENST00000231130 USF1P22415 310 aaPredicted RBP11.78□□□□□ -0.52
PCDHB3-201ENST00000231130 HOXC12P31275 282 aa11.78□□□□□ -0.52
PCDHB3-201ENST00000231130 CYB561P49447 251 aa11.78□□□□□ -0.52
PCDHB3-201ENST00000231130 TNXAQ16473 311 aa11.78□□□□□ -0.52
PCDHB3-201ENST00000231130 PMCHL2Q9BQD1 86 aa11.78□□□□□ -0.52
PCDHB3-201ENST00000231130 WDR54Q9H977 334 aa11.78□□□□□ -0.52
PCDHB3-201ENST00000231130 MED13Q9UHV7 2174 aa11.78□□□□□ -0.52
PCDHB3-201ENST00000231130 OR4C46A6NHA9 309 aa11.78□□□□□ -0.52
PCDHB3-201ENST00000231130 NDUFS8O00217 210 aa11.78□□□□□ -0.52
PCDHB3-201ENST00000231130 APCSP02743 223 aa11.78□□□□□ -0.52
PCDHB3-201ENST00000231130 CELA3BP08861 270 aa11.78□□□□□ -0.52
PCDHB3-201ENST00000231130 ESDP10768 282 aa11.78□□□□□ -0.52
PCDHB3-201ENST00000231130 GPR6P46095 362 aaPredicted RBP11.78□□□□□ -0.52
PCDHB3-201ENST00000231130 CLDN18P56856 261 aa11.78□□□□□ -0.52
PCDHB3-201ENST00000231130 UBE2G1P62253 170 aa11.78□□□□□ -0.52
PCDHB3-201ENST00000231130 PAX2Q02962 417 aa11.78□□□□□ -0.52
PCDHB3-201ENST00000231130 VWA1Q6PCB0 445 aa11.78□□□□□ -0.52
PCDHB3-201ENST00000231130 SLC25A34Q6PIV7 304 aa11.78□□□□□ -0.52
PCDHB3-201ENST00000231130 LINC00696Q6ZRV3 163 aa11.78□□□□□ -0.52
PCDHB3-201ENST00000231130 RAB37Q96AX2 223 aa11.78□□□□□ -0.52
PCDHB3-201ENST00000231130 FCGR3BO75015 233 aa11.78□□□□□ -0.52
PCDHB3-201ENST00000231130 CA1P00915 261 aaPredicted RBP11.78□□□□□ -0.52
PCDHB3-201ENST00000231130 CAMPP49913 170 aa11.78□□□□□ -0.52
PCDHB3-201ENST00000231130 LGALS4P56470 323 aa11.78□□□□□ -0.52
PCDHB3-201ENST00000231130 CATR1Q13166 79 aa11.78□□□□□ -0.52
PCDHB3-201ENST00000231130 RAB30Q15771 203 aa11.78□□□□□ -0.52
PCDHB3-201ENST00000231130 KRTAP27-1Q3LI81 207 aa11.78□□□□□ -0.52
PCDHB3-201ENST00000231130 SPATA31B1PQ5VZV4 182 aa11.78□□□□□ -0.52
PCDHB3-201ENST00000231130 OR4F17Q8NGA8 305 aa11.78□□□□□ -0.52
PCDHB3-201ENST00000231130 KCNIP2Q9NS61 270 aa11.78□□□□□ -0.52
PCDHB3-201ENST00000231130 CACNA1GO43497 2377 aa11.78□□□□□ -0.52
PCDHB3-201ENST00000231130 C12orf77C9JDV5 145 aa11.77□□□□□ -0.53
PCDHB3-201ENST00000231130 RHOGP84095 191 aa11.77□□□□□ -0.53
PCDHB3-201ENST00000231130 Q6P435 159 aa11.77□□□□□ -0.53
PCDHB3-201ENST00000231130 C5orf30Q96GV9 206 aa11.77□□□□□ -0.53
PCDHB3-201ENST00000231130 OBP2BQ9NPH6 170 aa11.77□□□□□ -0.53
PCDHB3-201ENST00000231130 TIMM9Q9Y5J7 89 aa11.77□□□□□ -0.53
PCDHB3-201ENST00000231130 RRHO14718 337 aa11.77□□□□□ -0.53
PCDHB3-201ENST00000231130 Q0VFX4 171 aa11.77□□□□□ -0.53
PCDHB3-201ENST00000231130 PSG7Q13046 419 aa11.77□□□□□ -0.53
PCDHB3-201ENST00000231130 POM121L2Q96KW2 1035 aa11.77□□□□□ -0.53
PCDHB3-201ENST00000231130 GP6Q9HCN6 339 aa11.77□□□□□ -0.53
PCDHB3-201ENST00000231130 LINC00473A8K010 186 aa11.76□□□□□ -0.53
PCDHB3-201ENST00000231130 HBZP02008 142 aa11.76□□□□□ -0.53
PCDHB3-201ENST00000231130 MAGEA5P43359 124 aa11.76□□□□□ -0.53
PCDHB3-201ENST00000231130 PLP1P60201 277 aa11.76□□□□□ -0.53
PCDHB3-201ENST00000231130 PRAMEF5Q5TYX0 476 aa11.76□□□□□ -0.53
PCDHB3-201ENST00000231130 PRAMEF6Q5VXH4 476 aa11.76□□□□□ -0.53
PCDHB3-201ENST00000231130 WDR73Q6P4I2 378 aa11.76□□□□□ -0.53
PCDHB3-201ENST00000231130 C12orf54Q6X4T0 127 aa11.76□□□□□ -0.53
PCDHB3-201ENST00000231130 NANOS1Q8WY41 292 aaKnown RBP11.76□□□□□ -0.53
PCDHB3-201ENST00000231130 SSBP3Q9BWW4 388 aaPredicted RBP11.76□□□□□ -0.53
PCDHB3-201ENST00000231130 PEF1Q9UBV8 284 aaKnown RBP11.76□□□□□ -0.53
PCDHB3-201ENST00000231130 C7orf71A4D174 169 aa11.76□□□□□ -0.53
PCDHB3-201ENST00000231130 SH2D7A6NKC9 451 aaPredicted RBP11.76□□□□□ -0.53
PCDHB3-201ENST00000231130 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.76□□□□□ -0.53
PCDHB3-201ENST00000231130 TMPRSS2O15393 492 aa11.76□□□□□ -0.53
PCDHB3-201ENST00000231130 FOXH1O75593 365 aa11.76□□□□□ -0.53
PCDHB3-201ENST00000231130 SRSF7Q16629 238 aaKnown RBP eCLIP11.76□□□□□ -0.53
PCDHB3-201ENST00000231130 BVES-AS1Q5T3Y7 98 aa11.76□□□□□ -0.53
PCDHB3-201ENST00000231130 ZNF497Q6ZNH5 498 aa11.76□□□□□ -0.53
PCDHB3-201ENST00000231130 WDR86Q86TI4 376 aa11.76□□□□□ -0.53
PCDHB3-201ENST00000231130 PIGBOS1A0A0B4J2F0 54 aa11.76□□□□□ -0.53
PCDHB3-201ENST00000231130 PATE3B3GLJ2 98 aa11.76□□□□□ -0.53
PCDHB3-201ENST00000231130 J3QT63 122 aa11.76□□□□□ -0.53
PCDHB3-201ENST00000231130 NEURL1O76050 574 aa11.76□□□□□ -0.53
PCDHB3-201ENST00000231130 EBLN2Q6P2I7 272 aa11.76□□□□□ -0.53
PCDHB3-201ENST00000231130 NHLRC2Q8NBF2 726 aa11.76□□□□□ -0.53
PCDHB3-201ENST00000231130 LY6G6EA0A0G2JKS1 128 aa11.75□□□□□ -0.53
PCDHB3-201ENST00000231130 PMS2P5A8MQ11 134 aa11.75□□□□□ -0.53
PCDHB3-201ENST00000231130 BMPR1BO00238 502 aa11.75□□□□□ -0.53
PCDHB3-201ENST00000231130 ARR3P36575 388 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms