RNA–Protein interactions for RNA: ENST00000228251.8

YBX3-201, Transcript of Y-box binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene YBX3, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-201ENST00000228251 A0A1W2PR64 198 aa15.52■□□□□ 0.08
YBX3-201ENST00000228251 A0A1W2PRV1 198 aa15.52■□□□□ 0.08
YBX3-201ENST00000228251 SMCO3A2RU48 225 aa15.52■□□□□ 0.08
YBX3-201ENST00000228251 CXorf65A6NEN9 183 aa15.52■□□□□ 0.08
YBX3-201ENST00000228251 PSMB3P49720 205 aa15.52■□□□□ 0.08
YBX3-201ENST00000228251 C2orf83Q53S99 150 aa15.52■□□□□ 0.08
YBX3-201ENST00000228251 MIC13Q5XKP0 118 aa15.52■□□□□ 0.08
YBX3-201ENST00000228251 OR10X1Q8NGY0 326 aa15.52■□□□□ 0.08
YBX3-201ENST00000228251 TMEM167AQ8TBQ9 72 aa15.52■□□□□ 0.08
YBX3-201ENST00000228251 NDUFA4L2Q9NRX3 87 aa15.52■□□□□ 0.08
YBX3-201ENST00000228251 DCHS2Q6V1P9 2916 aa15.52■□□□□ 0.08
YBX3-201ENST00000228251 RNASE2P10153 161 aaKnown RBP15.52■□□□□ 0.07
YBX3-201ENST00000228251 REG1BP48304 166 aa15.52■□□□□ 0.07
YBX3-201ENST00000228251 OR1L8Q8NGR8 309 aa15.52■□□□□ 0.07
YBX3-201ENST00000228251 TMEM133Q9H2Q1 129 aa15.52■□□□□ 0.07
YBX3-201ENST00000228251 RALYQ9UKM9 306 aaKnown RBP15.52■□□□□ 0.07
YBX3-201ENST00000228251 PRR20EP86478 221 aa15.51■□□□□ 0.07
YBX3-201ENST00000228251 PRR20CP86479 221 aa15.51■□□□□ 0.07
YBX3-201ENST00000228251 PRR20DP86480 221 aa15.51■□□□□ 0.07
YBX3-201ENST00000228251 PRR20BP86481 221 aa15.51■□□□□ 0.07
YBX3-201ENST00000228251 PRR20AP86496 221 aa15.51■□□□□ 0.07
YBX3-201ENST00000228251 TEPPQ6URK8 271 aa15.51■□□□□ 0.07
YBX3-201ENST00000228251 CYP2G1PQ6ZSU1 146 aa15.51■□□□□ 0.07
YBX3-201ENST00000228251 OR4C13Q8NGP0 309 aa15.51■□□□□ 0.07
YBX3-201ENST00000228251 OR4A5Q8NH83 315 aa15.51■□□□□ 0.07
YBX3-201ENST00000228251 C8orf46Q8TAG6 207 aa15.51■□□□□ 0.07
YBX3-201ENST00000228251 FLYWCH2Q96CP2 140 aaKnown RBP15.51■□□□□ 0.07
YBX3-201ENST00000228251 KCNIP2Q9NS61 270 aa15.51■□□□□ 0.07
YBX3-201ENST00000228251 TMEM242Q9NWH2 141 aa15.51■□□□□ 0.07
YBX3-201ENST00000228251 CGB1A6NKQ9 187 aa15.5■□□□□ 0.07
YBX3-201ENST00000228251 IGLV1-47P01700 117 aa15.5■□□□□ 0.07
YBX3-201ENST00000228251 STAG3L2P0CL84 134 aa15.5■□□□□ 0.07
YBX3-201ENST00000228251 STAG3L3P0CL85 134 aa15.5■□□□□ 0.07
YBX3-201ENST00000228251 RPL29P47914 159 aaKnown RBP15.5■□□□□ 0.07
YBX3-201ENST00000228251 ELOBQ15370 118 aa15.5■□□□□ 0.07
YBX3-201ENST00000228251 MRGPRG-AS1Q2M3A8 158 aa15.5■□□□□ 0.07
YBX3-201ENST00000228251 C1QL4Q86Z23 238 aa15.5■□□□□ 0.07
YBX3-201ENST00000228251 ZFP82Q8N141 532 aa15.5■□□□□ 0.07
YBX3-201ENST00000228251 TNFRSF14Q92956 283 aa15.5■□□□□ 0.07
YBX3-201ENST00000228251 BIN3Q9NQY0 253 aa15.5■□□□□ 0.07
YBX3-201ENST00000228251 WASHC3Q9Y3C0 194 aa15.5■□□□□ 0.07
YBX3-201ENST00000228251 MALRD1Q5VYJ5 2156 aa15.5■□□□□ 0.07
YBX3-201ENST00000228251 ABCA4P78363 2273 aa15.5■□□□□ 0.07
YBX3-201ENST00000228251 LRBAP50851 2863 aa15.49■□□□□ 0.07
YBX3-201ENST00000228251 C1orf196B1AJZ1 125 aa15.49■□□□□ 0.07
YBX3-201ENST00000228251 USF1P22415 310 aaPredicted RBP15.49■□□□□ 0.07
YBX3-201ENST00000228251 RND2P52198 227 aa15.49■□□□□ 0.07
YBX3-201ENST00000228251 RAB5BP61020 215 aa15.49■□□□□ 0.07
YBX3-201ENST00000228251 RPL8P62917 257 aaKnown RBP15.49■□□□□ 0.07
YBX3-201ENST00000228251 C11orf71Q6IPW1 123 aa15.49■□□□□ 0.07
YBX3-201ENST00000228251 NEIL1Q96FI4 390 aaPredicted RBP15.49■□□□□ 0.07
YBX3-201ENST00000228251 HINT2Q9BX68 163 aa15.49■□□□□ 0.07
YBX3-201ENST00000228251 SAV1Q9H4B6 383 aaPredicted RBP15.49■□□□□ 0.07
YBX3-201ENST00000228251 PATZ1Q9HBE1 687 aaKnown RBP15.49■□□□□ 0.07
YBX3-201ENST00000228251 ITPR1Q14643 2758 aa15.49■□□□□ 0.07
YBX3-201ENST00000228251 E7EUB6 86 aa15.49■□□□□ 0.07
YBX3-201ENST00000228251 PAGE4O60829 102 aa15.49■□□□□ 0.07
YBX3-201ENST00000228251 RBP4P02753 201 aa15.49■□□□□ 0.07
YBX3-201ENST00000228251 C1QTNF9P0C862 333 aa15.49■□□□□ 0.07
YBX3-201ENST00000228251 LINC00869P0C866 280 aa15.49■□□□□ 0.07
YBX3-201ENST00000228251 TGIF2LXQ8IUE1 241 aa15.49■□□□□ 0.07
YBX3-201ENST00000228251 OR10W1Q8NGF6 305 aa15.49■□□□□ 0.07
YBX3-201ENST00000228251 C2CD4CQ8TF44 421 aa15.49■□□□□ 0.07
YBX3-201ENST00000228251 Q8WTZ3 238 aa15.49■□□□□ 0.07
YBX3-201ENST00000228251 PRORYQ9H606 182 aa15.49■□□□□ 0.07
YBX3-201ENST00000228251 NAT8Q9UHE5 227 aa15.49■□□□□ 0.07
YBX3-201ENST00000228251 NBASA2RRP1 2371 aa15.48■□□□□ 0.07
YBX3-201ENST00000228251 OPN1MWP04001 364 aa15.48■□□□□ 0.07
YBX3-201ENST00000228251 OPN1MW2P0DN77 364 aa15.48■□□□□ 0.07
YBX3-201ENST00000228251 OPN1MW3P0DN78 364 aa15.48■□□□□ 0.07
YBX3-201ENST00000228251 NPPCP23582 126 aa15.48■□□□□ 0.07
YBX3-201ENST00000228251 ZNF343Q6P1L6 599 aa15.48■□□□□ 0.07
YBX3-201ENST00000228251 TMEM144Q7Z5S9 345 aa15.48■□□□□ 0.07
YBX3-201ENST00000228251 STPG3Q8N7X2 389 aa15.48■□□□□ 0.07
YBX3-201ENST00000228251 SMIM7Q9BQ49 75 aa15.48■□□□□ 0.07
YBX3-201ENST00000228251 SLC45A2Q9UMX9 530 aa15.48■□□□□ 0.07
YBX3-201ENST00000228251 CHD8Q9HCK8 2581 aa15.48■□□□□ 0.07
YBX3-201ENST00000228251 IGKV1OR2-108A0A075B7D4 117 aa15.47■□□□□ 0.07
YBX3-201ENST00000228251 IGFBP2P18065 325 aa15.47■□□□□ 0.07
YBX3-201ENST00000228251 B2MP61769 119 aa15.47■□□□□ 0.07
YBX3-201ENST00000228251 VSTM2AQ8TAG5 236 aa15.47■□□□□ 0.07
YBX3-201ENST00000228251 SSMEM1Q8WWF3 244 aa15.47■□□□□ 0.07
YBX3-201ENST00000228251 PARLQ9H300 379 aa15.47■□□□□ 0.07
YBX3-201ENST00000228251 IGHV2-26A0A0B4J1V2 119 aa15.47■□□□□ 0.07
YBX3-201ENST00000228251 CXCL1P09341 107 aa15.47■□□□□ 0.07
YBX3-201ENST00000228251 MC5RP33032 325 aa15.47■□□□□ 0.07
YBX3-201ENST00000228251 MOB3BQ86TA1 216 aa15.47■□□□□ 0.07
YBX3-201ENST00000228251 OR4F5Q8NH21 305 aa15.47■□□□□ 0.07
YBX3-201ENST00000228251 ABHD5Q8WTS1 349 aa15.47■□□□□ 0.07
YBX3-201ENST00000228251 OR4F4Q96R69 305 aa15.47■□□□□ 0.07
YBX3-201ENST00000228251 A0A1W2PPV4 95 aa15.46■□□□□ 0.07
YBX3-201ENST00000228251 HLA-DRB5Q30154 266 aa15.46■□□□□ 0.07
YBX3-201ENST00000228251 SPNS3Q6ZMD2 512 aa15.46■□□□□ 0.07
YBX3-201ENST00000228251 LY6G5BQ8NDX9 201 aa15.46■□□□□ 0.07
YBX3-201ENST00000228251 RITA1Q96K30 269 aa15.46■□□□□ 0.07
YBX3-201ENST00000228251 COMMD5Q9GZQ3 224 aa15.46■□□□□ 0.07
YBX3-201ENST00000228251 ZNF430Q9H8G1 570 aaPredicted RBP15.46■□□□□ 0.07
YBX3-201ENST00000228251 NAV3Q8IVL0 2385 aa15.46■□□□□ 0.06
YBX3-201ENST00000228251 NCOR2Q9Y618 2525 aa15.46■□□□□ 0.06
YBX3-201ENST00000228251 C5orf52A6NGY3 159 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms