RNA–Protein interactions for RNA: ENST00000223129.8

RPA3-201, Transcript of replication protein A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPA3, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-201ENST00000223129 C19orf54Q5BKX5 351 aa11.76□□□□□ -0.53
RPA3-201ENST00000223129 C3orf56Q8N813 242 aa11.76□□□□□ -0.53
RPA3-201ENST00000223129 LRTM2Q8N967 370 aa11.76□□□□□ -0.53
RPA3-201ENST00000223129 QTRT1Q9BXR0 403 aaKnown RBP11.76□□□□□ -0.53
RPA3-201ENST00000223129 SHPKQ9UHJ6 478 aa11.76□□□□□ -0.53
RPA3-201ENST00000223129 PRNDQ9UKY0 176 aa11.76□□□□□ -0.53
RPA3-201ENST00000223129 A0A1W2PN81 502 aa11.76□□□□□ -0.53
RPA3-201ENST00000223129 TEX22C9J3V5 150 aa11.76□□□□□ -0.53
RPA3-201ENST00000223129 HOXB5P09067 269 aa11.76□□□□□ -0.53
RPA3-201ENST00000223129 CD28P10747 220 aa11.76□□□□□ -0.53
RPA3-201ENST00000223129 CHRNA7P36544 502 aa11.76□□□□□ -0.53
RPA3-201ENST00000223129 TMEM267Q0VDI3 215 aaPredicted RBP11.76□□□□□ -0.53
RPA3-201ENST00000223129 AKIRIN2Q53H80 203 aa11.76□□□□□ -0.53
RPA3-201ENST00000223129 LCNL1Q6ZST4 164 aa11.76□□□□□ -0.53
RPA3-201ENST00000223129 OR5T1Q8NG75 326 aa11.76□□□□□ -0.53
RPA3-201ENST00000223129 LSM10Q969L4 123 aaKnown RBP11.76□□□□□ -0.53
RPA3-201ENST00000223129 TMEM14BQ9NUH8 114 aa11.76□□□□□ -0.53
RPA3-201ENST00000223129 ZNF580Q9UK33 172 aa11.76□□□□□ -0.53
RPA3-201ENST00000223129 SOX15O60248 233 aa11.75□□□□□ -0.53
RPA3-201ENST00000223129 SLC35B1P78383 322 aa11.75□□□□□ -0.53
RPA3-201ENST00000223129 NMSQ5H8A3 153 aa11.75□□□□□ -0.53
RPA3-201ENST00000223129 TCTEX1D4Q5JR98 221 aa11.75□□□□□ -0.53
RPA3-201ENST00000223129 FAM219AQ8IW50 185 aa11.75□□□□□ -0.53
RPA3-201ENST00000223129 OR10W1Q8NGF6 305 aa11.75□□□□□ -0.53
RPA3-201ENST00000223129 COQ8AQ8NI60 647 aa11.75□□□□□ -0.53
RPA3-201ENST00000223129 SPIN2AQ99865 258 aa11.75□□□□□ -0.53
RPA3-201ENST00000223129 SPIN2BQ9BPZ2 258 aa11.75□□□□□ -0.53
RPA3-201ENST00000223129 HINT2Q9BX68 163 aa11.75□□□□□ -0.53
RPA3-201ENST00000223129 CACNG5Q9UF02 275 aa11.75□□□□□ -0.53
RPA3-201ENST00000223129 ADAP1O75689 374 aa11.74□□□□□ -0.53
RPA3-201ENST00000223129 ZNF767PQ75MW2 155 aa11.74□□□□□ -0.53
RPA3-201ENST00000223129 ZNF431Q8TF32 576 aaPredicted RBP11.74□□□□□ -0.53
RPA3-201ENST00000223129 MITD1Q8WV92 249 aa11.74□□□□□ -0.53
RPA3-201ENST00000223129 ZNF747Q9BV97 191 aa11.74□□□□□ -0.53
RPA3-201ENST00000223129 FOXA2Q9Y261 457 aaPredicted RBP11.74□□□□□ -0.53
RPA3-201ENST00000223129 STAB1Q9NY15 2570 aa11.74□□□□□ -0.53
RPA3-201ENST00000223129 ST8SIA3O43173 380 aa11.74□□□□□ -0.53
RPA3-201ENST00000223129 FGF2P09038 288 aa11.74□□□□□ -0.53
RPA3-201ENST00000223129 AREGP15514 252 aa11.74□□□□□ -0.53
RPA3-201ENST00000223129 SPINK9Q5DT21 86 aa11.74□□□□□ -0.53
RPA3-201ENST00000223129 UXS1Q8NBZ7 420 aa11.74□□□□□ -0.53
RPA3-201ENST00000223129 OR1L8Q8NGR8 309 aa11.74□□□□□ -0.53
RPA3-201ENST00000223129 NDUFA4L2Q9NRX3 87 aa11.74□□□□□ -0.53
RPA3-201ENST00000223129 FKBP11Q9NYL4 201 aa11.74□□□□□ -0.53
RPA3-201ENST00000223129 NXPH3O95157 252 aa11.73□□□□□ -0.53
RPA3-201ENST00000223129 IGHG4P01861 327 aa11.73□□□□□ -0.53
RPA3-201ENST00000223129 IL5P05113 134 aa11.73□□□□□ -0.53
RPA3-201ENST00000223129 REG1AP05451 166 aa11.73□□□□□ -0.53
RPA3-201ENST00000223129 GGNBP1Q5YKI7 109 aa11.73□□□□□ -0.53
RPA3-201ENST00000223129 TEX38Q6PEX7 206 aa11.73□□□□□ -0.53
RPA3-201ENST00000223129 C19orf35Q6ZS72 473 aa11.73□□□□□ -0.53
RPA3-201ENST00000223129 HYLS1Q96M11 299 aa11.73□□□□□ -0.53
RPA3-201ENST00000223129 KLK15Q9H2R5 256 aa11.73□□□□□ -0.53
RPA3-201ENST00000223129 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.73□□□□□ -0.53
RPA3-201ENST00000223129 DUXBA0A1W2PPF3 345 aa11.72□□□□□ -0.53
RPA3-201ENST00000223129 MPTX1A8MV57 137 aa11.72□□□□□ -0.53
RPA3-201ENST00000223129 FBXO24O75426 580 aa11.72□□□□□ -0.53
RPA3-201ENST00000223129 IGLV1-40P01703 118 aa11.72□□□□□ -0.53
RPA3-201ENST00000223129 HTR2BP41595 481 aa11.72□□□□□ -0.53
RPA3-201ENST00000223129 HSPE1P61604 102 aaKnown RBP11.72□□□□□ -0.53
RPA3-201ENST00000223129 ZNF429Q86V71 674 aa11.72□□□□□ -0.53
RPA3-201ENST00000223129 OR4X2Q8NGF9 303 aa11.72□□□□□ -0.53
RPA3-201ENST00000223129 OR5B3Q8NH48 314 aa11.72□□□□□ -0.53
RPA3-201ENST00000223129 MS4A10Q96PG2 267 aa11.72□□□□□ -0.53
RPA3-201ENST00000223129 CITED1Q99966 193 aa11.72□□□□□ -0.53
RPA3-201ENST00000223129 CITED2Q99967 270 aaPredicted RBP11.72□□□□□ -0.53
RPA3-201ENST00000223129 TMED3Q9Y3Q3 217 aa11.72□□□□□ -0.53
RPA3-201ENST00000223129 IGLC7A0M8Q6 106 aa11.72□□□□□ -0.53
RPA3-201ENST00000223129 DHFRP00374 187 aa11.72□□□□□ -0.53
RPA3-201ENST00000223129 IFNA17P01571 189 aa11.72□□□□□ -0.53
RPA3-201ENST00000223129 PRH1P02810 166 aa11.72□□□□□ -0.53
RPA3-201ENST00000223129 RPLP1P05386 114 aaKnown RBP11.72□□□□□ -0.53
RPA3-201ENST00000223129 SULT1A3P0DMM9 295 aa11.72□□□□□ -0.53
RPA3-201ENST00000223129 SULT1A4P0DMN0 295 aa11.72□□□□□ -0.53
RPA3-201ENST00000223129 PF4V1P10720 104 aa11.72□□□□□ -0.53
RPA3-201ENST00000223129 C12orf45Q8N5I9 185 aaPredicted RBP11.72□□□□□ -0.53
RPA3-201ENST00000223129 TMEM68Q96MH6 324 aa11.72□□□□□ -0.53
RPA3-201ENST00000223129 ZNF355PQ9NSJ1 428 aa11.72□□□□□ -0.53
RPA3-201ENST00000223129 ZNF257Q9Y2Q1 563 aa11.72□□□□□ -0.53
RPA3-201ENST00000223129 PSMB8P28062 276 aa11.71□□□□□ -0.53
RPA3-201ENST00000223129 WT1-ASQ06250 92 aa11.71□□□□□ -0.53
RPA3-201ENST00000223129 SMCO1Q147U7 214 aa11.71□□□□□ -0.53
RPA3-201ENST00000223129 LAMTOR1Q6IAA8 161 aa11.71□□□□□ -0.53
RPA3-201ENST00000223129 TTC9CQ8N5M4 171 aa11.71□□□□□ -0.53
RPA3-201ENST00000223129 OR5M8Q8NGP6 311 aa11.71□□□□□ -0.53
RPA3-201ENST00000223129 COA4Q9NYJ1 87 aa11.71□□□□□ -0.53
RPA3-201ENST00000223129 PIGBOS1A0A0B4J2F0 54 aa11.7□□□□□ -0.54
RPA3-201ENST00000223129 TCRBV4S1A1TA0A5B7 111 aa11.7□□□□□ -0.54
RPA3-201ENST00000223129 C7orf66A4D0T2 115 aa11.7□□□□□ -0.54
RPA3-201ENST00000223129 OR13C7P0DN81 318 aa11.7□□□□□ -0.54
RPA3-201ENST00000223129 PRCDQ00LT1 54 aa11.7□□□□□ -0.54
RPA3-201ENST00000223129 FOXE3Q13461 319 aa11.7□□□□□ -0.54
RPA3-201ENST00000223129 FAM110DQ8TAY7 271 aaPredicted RBP11.7□□□□□ -0.54
RPA3-201ENST00000223129 PDCD10Q9BUL8 212 aa11.7□□□□□ -0.54
RPA3-201ENST00000223129 MED28Q9H204 178 aa11.7□□□□□ -0.54
RPA3-201ENST00000223129 GPN1Q9HCN4 374 aaPredicted RBP11.7□□□□□ -0.54
RPA3-201ENST00000223129 A0A1B0GU03 582 aa11.7□□□□□ -0.54
RPA3-201ENST00000223129 CCSO14618 274 aa11.7□□□□□ -0.54
RPA3-201ENST00000223129 PRAF2O60831 178 aa11.7□□□□□ -0.54
RPA3-201ENST00000223129 ELANEP08246 267 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms