RNA–Protein interactions for RNA: ENST00000221265.7

PAF1-201, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PAF1, Length 2,066 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-201ENST00000221265 TVP23CQ96ET8 276 aa12.29□□□□□ -0.44
PAF1-201ENST00000221265 S1PR3Q99500 378 aa12.29□□□□□ -0.44
PAF1-201ENST00000221265 TMEM147Q9BVK8 224 aa12.29□□□□□ -0.44
PAF1-201ENST00000221265 SIRT7Q9NRC8 400 aa12.29□□□□□ -0.44
PAF1-201ENST00000221265 MARCH11A6NNE9 402 aa12.28□□□□□ -0.44
PAF1-201ENST00000221265 EIF3GO75821 320 aaKnown RBP eCLIP12.28□□□□□ -0.44
PAF1-201ENST00000221265 HNF4GQ14541 408 aa12.28□□□□□ -0.44
PAF1-201ENST00000221265 FAM90A2PQ658T7 463 aa12.28□□□□□ -0.44
PAF1-201ENST00000221265 RPP25LQ8N5L8 163 aaKnown RBP12.28□□□□□ -0.44
PAF1-201ENST00000221265 LINC00311Q8N616 119 aa12.28□□□□□ -0.44
PAF1-201ENST00000221265 C10orf105Q8TEF2 133 aa12.28□□□□□ -0.44
PAF1-201ENST00000221265 R3HDM4Q96D70 268 aa12.28□□□□□ -0.44
PAF1-201ENST00000221265 MALSU1Q96EH3 234 aa12.28□□□□□ -0.44
PAF1-201ENST00000221265 MRPL20Q9BYC9 149 aaKnown RBP12.28□□□□□ -0.44
PAF1-201ENST00000221265 A0A087WWC5 75 aa12.28□□□□□ -0.44
PAF1-201ENST00000221265 RBMXL2O75526 392 aaKnown RBP12.28□□□□□ -0.44
PAF1-201ENST00000221265 IFNA4P05014 189 aa12.28□□□□□ -0.44
PAF1-201ENST00000221265 OR9G9P0C7N8 305 aa12.28□□□□□ -0.44
PAF1-201ENST00000221265 ACSM6Q6P461 480 aa12.28□□□□□ -0.44
PAF1-201ENST00000221265 C8orf31Q8N9H6 132 aa12.28□□□□□ -0.44
PAF1-201ENST00000221265 OR10P1Q8NGE3 313 aa12.28□□□□□ -0.44
PAF1-201ENST00000221265 CIB3Q96Q77 187 aaPredicted RBP12.28□□□□□ -0.44
PAF1-201ENST00000221265 NIPSNAP3BQ9BS92 247 aa12.28□□□□□ -0.44
PAF1-201ENST00000221265 QTRT1Q9BXR0 403 aaKnown RBP12.28□□□□□ -0.44
PAF1-201ENST00000221265 ZFHX3Q15911 3703 aa12.28□□□□□ -0.44
PAF1-201ENST00000221265 IGHV4-30-2A0A087WSY4 118 aa12.27□□□□□ -0.45
PAF1-201ENST00000221265 IGHV4-61A0A0C4DH41 118 aa12.27□□□□□ -0.45
PAF1-201ENST00000221265 MAP1LC3B2A6NCE7 125 aa12.27□□□□□ -0.45
PAF1-201ENST00000221265 C5orf52A6NGY3 159 aa12.27□□□□□ -0.45
PAF1-201ENST00000221265 CEBPZOSA8MTT3 80 aa12.27□□□□□ -0.45
PAF1-201ENST00000221265 THBS3P49746 956 aa12.27□□□□□ -0.45
PAF1-201ENST00000221265 RAB11AP62491 216 aa12.27□□□□□ -0.45
PAF1-201ENST00000221265 PAX2Q02962 417 aa12.27□□□□□ -0.45
PAF1-201ENST00000221265 SSX9Q7RTT3 188 aa12.27□□□□□ -0.45
PAF1-201ENST00000221265 SLC35E3Q7Z769 313 aa12.27□□□□□ -0.45
PAF1-201ENST00000221265 ST6GALNAC6Q969X2 333 aa12.27□□□□□ -0.45
PAF1-201ENST00000221265 MAP1LC3BQ9GZQ8 125 aa12.27□□□□□ -0.45
PAF1-201ENST00000221265 PLXNB1O43157 2135 aa12.27□□□□□ -0.45
PAF1-201ENST00000221265 IGLV1-47P01700 117 aa12.26□□□□□ -0.45
PAF1-201ENST00000221265 RBP4P02753 201 aa12.26□□□□□ -0.45
PAF1-201ENST00000221265 IGKV1-16P04430 117 aa12.26□□□□□ -0.45
PAF1-201ENST00000221265 KLRD1Q13241 179 aa12.26□□□□□ -0.45
PAF1-201ENST00000221265 PNKDQ8N490 385 aa12.26□□□□□ -0.45
PAF1-201ENST00000221265 PIMREGQ9BSJ6 248 aa12.26□□□□□ -0.45
PAF1-201ENST00000221265 LPAR2Q9HBW0 351 aa12.26□□□□□ -0.45
PAF1-201ENST00000221265 SLC39A9Q9NUM3 307 aa12.26□□□□□ -0.45
PAF1-201ENST00000221265 ZNF98A6NK75 572 aa12.26□□□□□ -0.45
PAF1-201ENST00000221265 VWC2LB2RUY7 222 aa12.26□□□□□ -0.45
PAF1-201ENST00000221265 HPRT1P00492 218 aa12.26□□□□□ -0.45
PAF1-201ENST00000221265 FGF7P21781 194 aa12.26□□□□□ -0.45
PAF1-201ENST00000221265 VWC2Q2TAL6 325 aa12.26□□□□□ -0.45
PAF1-201ENST00000221265 CLEC2AQ6UVW9 174 aa12.26□□□□□ -0.45
PAF1-201ENST00000221265 CLEC7AQ9BXN2 247 aa12.26□□□□□ -0.45
PAF1-201ENST00000221265 HECTD1Q9ULT8 2610 aa12.25□□□□□ -0.45
PAF1-201ENST00000221265 C15orf62A8K5M9 175 aa12.25□□□□□ -0.45
PAF1-201ENST00000221265 RBFOX2O43251 390 aaKnown RBP eCLIP12.25□□□□□ -0.45
PAF1-201ENST00000221265 OR2B8PP59922 312 aa12.25□□□□□ -0.45
PAF1-201ENST00000221265 HLA-DRB5Q30154 266 aa12.25□□□□□ -0.45
PAF1-201ENST00000221265 AARDQ4LEZ3 155 aa12.25□□□□□ -0.45
PAF1-201ENST00000221265 LDLRAD2Q5SZI1 272 aa12.25□□□□□ -0.45
PAF1-201ENST00000221265 PSMG3-AS1Q96PY0 264 aa12.25□□□□□ -0.45
PAF1-201ENST00000221265 VAX2Q9UIW0 290 aa12.25□□□□□ -0.45
PAF1-201ENST00000221265 UNC79Q9P2D8 2635 aa12.25□□□□□ -0.45
PAF1-201ENST00000221265 CCDC168Q8NDH2 2452 aa12.25□□□□□ -0.45
PAF1-201ENST00000221265 MDKP21741 143 aaPredicted RBP12.25□□□□□ -0.45
PAF1-201ENST00000221265 ZNF137PP52743 207 aa12.25□□□□□ -0.45
PAF1-201ENST00000221265 PMS2P11Q13670 270 aa12.25□□□□□ -0.45
PAF1-201ENST00000221265 HCP5Q6MZN7 132 aa12.25□□□□□ -0.45
PAF1-201ENST00000221265 ZNF343Q6P1L6 599 aa12.25□□□□□ -0.45
PAF1-201ENST00000221265 OR4P4Q8NGL7 312 aa12.25□□□□□ -0.45
PAF1-201ENST00000221265 OR4S2Q8NH73 311 aa12.25□□□□□ -0.45
PAF1-201ENST00000221265 LHX4Q969G2 390 aa12.25□□□□□ -0.45
PAF1-201ENST00000221265 P2RX4Q99571 388 aa12.25□□□□□ -0.45
PAF1-201ENST00000221265 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.25□□□□□ -0.455e-10■■■□□ 17.5
PAF1-201ENST00000221265 M0R1W7 72 aa12.24□□□□□ -0.45
PAF1-201ENST00000221265 TMEM186Q96B77 213 aa12.24□□□□□ -0.45
PAF1-201ENST00000221265 ADTRPQ96IZ2 230 aa12.24□□□□□ -0.45
PAF1-201ENST00000221265 NABP2Q9BQ15 211 aa12.24□□□□□ -0.45
PAF1-201ENST00000221265 SLC35D1Q9NTN3 355 aa12.24□□□□□ -0.45
PAF1-201ENST00000221265 TRAV3A0A0B4J244 114 aa12.23□□□□□ -0.45
PAF1-201ENST00000221265 IGHV2-70DA0A0C4DH43 119 aa12.23□□□□□ -0.45
PAF1-201ENST00000221265 A0A1W2PRD5 423 aa12.23□□□□□ -0.45
PAF1-201ENST00000221265 A0A1W2PRF3 423 aa12.23□□□□□ -0.45
PAF1-201ENST00000221265 A0A1W2PRM7 423 aa12.23□□□□□ -0.45
PAF1-201ENST00000221265 FAM90A9PA6NNJ1 464 aa12.23□□□□□ -0.45
PAF1-201ENST00000221265 H0YJW9 148 aa12.23□□□□□ -0.45
PAF1-201ENST00000221265 UBE2CO00762 179 aa12.23□□□□□ -0.45
PAF1-201ENST00000221265 HMGB3O15347 200 aaKnown RBP12.23□□□□□ -0.45
PAF1-201ENST00000221265 ENSAO43768 121 aaKnown RBP12.23□□□□□ -0.45
PAF1-201ENST00000221265 IFNA17P01571 189 aa12.23□□□□□ -0.45
PAF1-201ENST00000221265 S100A6P06703 90 aa12.23□□□□□ -0.45
PAF1-201ENST00000221265 KIR2DS2P43631 304 aa12.23□□□□□ -0.45
PAF1-201ENST00000221265 ELOBQ15370 118 aa12.23□□□□□ -0.45
PAF1-201ENST00000221265 FFAR4Q5NUL3 377 aa12.23□□□□□ -0.45
PAF1-201ENST00000221265 OR10G9Q8NGN4 311 aa12.23□□□□□ -0.45
PAF1-201ENST00000221265 OR10G7Q8NGN6 311 aa12.23□□□□□ -0.45
PAF1-201ENST00000221265 TNFRSF14Q92956 283 aa12.23□□□□□ -0.45
PAF1-201ENST00000221265 C12orf57Q99622 126 aa12.23□□□□□ -0.45
PAF1-201ENST00000221265 NPCDR1Q9BY65 106 aa12.23□□□□□ -0.45
PAF1-201ENST00000221265 TMPRSS5Q9H3S3 457 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms