RNA–Protein interactions for RNA: ENST00000221222.15

HOMER3-201, Transcript of homer scaffold protein 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene HOMER3, Length 1,384 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-201ENST00000221222 NMSQ5H8A3 153 aa18.46■□□□□ 0.55
HOMER3-201ENST00000221222 Q6ZRM9 215 aa18.46■□□□□ 0.55
HOMER3-201ENST00000221222 GPR146Q96CH1 333 aa18.46■□□□□ 0.55
HOMER3-201ENST00000221222 NDUFA4L2Q9NRX3 87 aa18.46■□□□□ 0.55
HOMER3-201ENST00000221222 HMX3A6NHT5 357 aa18.45■□□□□ 0.54
HOMER3-201ENST00000221222 AARDQ4LEZ3 155 aa18.45■□□□□ 0.54
HOMER3-201ENST00000221222 PLET1Q6UQ28 207 aa18.45■□□□□ 0.54
HOMER3-201ENST00000221222 FAM110DQ8TAY7 271 aaPredicted RBP18.45■□□□□ 0.54
HOMER3-201ENST00000221222 BRI3O95415 125 aa18.44■□□□□ 0.54
HOMER3-201ENST00000221222 TRAPPC2P0DI81 140 aa18.44■□□□□ 0.54
HOMER3-201ENST00000221222 TRAPPC2BP0DI82 140 aa18.44■□□□□ 0.54
HOMER3-201ENST00000221222 APELAP0DMC3 54 aa18.44■□□□□ 0.54
HOMER3-201ENST00000221222 DCTN2Q13561 401 aaKnown RBP18.44■□□□□ 0.54
HOMER3-201ENST00000221222 CXorf66Q5JRM2 361 aaPredicted RBP18.44■□□□□ 0.54
HOMER3-201ENST00000221222 TTC9CQ8N5M4 171 aa18.44■□□□□ 0.54
HOMER3-201ENST00000221222 COQ8AQ8NI60 647 aa18.44■□□□□ 0.54
HOMER3-201ENST00000221222 CITED2Q99967 270 aaPredicted RBP18.44■□□□□ 0.54
HOMER3-201ENST00000221222 IGLC7A0M8Q6 106 aa18.43■□□□□ 0.54
HOMER3-201ENST00000221222 H3BUA1 57 aa18.43■□□□□ 0.54
HOMER3-201ENST00000221222 RBMXL2O75526 392 aaKnown RBP18.43■□□□□ 0.54
HOMER3-201ENST00000221222 PTTG1O95997 202 aa18.43■□□□□ 0.54
HOMER3-201ENST00000221222 HSPE1P61604 102 aaKnown RBP18.43■□□□□ 0.54
HOMER3-201ENST00000221222 HSD17B13Q7Z5P4 300 aaPredicted RBP18.43■□□□□ 0.54
HOMER3-201ENST00000221222 OR5T1Q8NG75 326 aa18.43■□□□□ 0.54
HOMER3-201ENST00000221222 OR52B4Q8NGK2 314 aa18.43■□□□□ 0.54
HOMER3-201ENST00000221222 MYOZ3Q8TDC0 251 aa18.43■□□□□ 0.54
HOMER3-201ENST00000221222 MITD1Q8WV92 249 aa18.43■□□□□ 0.54
HOMER3-201ENST00000221222 MARVELD1Q9BSK0 173 aa18.43■□□□□ 0.54
HOMER3-201ENST00000221222 COA4Q9NYJ1 87 aa18.43■□□□□ 0.54
HOMER3-201ENST00000221222 CACNG5Q9UF02 275 aa18.43■□□□□ 0.54
HOMER3-201ENST00000221222 TMED3Q9Y3Q3 217 aa18.43■□□□□ 0.54
HOMER3-201ENST00000221222 TCRBV4S1A1TA0A5B7 111 aa18.42■□□□□ 0.54
HOMER3-201ENST00000221222 NPIPB5A8MRT5 1133 aa18.42■□□□□ 0.54
HOMER3-201ENST00000221222 IL5P05113 134 aa18.42■□□□□ 0.54
HOMER3-201ENST00000221222 AREGP15514 252 aa18.42■□□□□ 0.54
HOMER3-201ENST00000221222 HIST2H2BDQ6DRA6 164 aa18.42■□□□□ 0.54
HOMER3-201ENST00000221222 KLK15Q9H2R5 256 aa18.42■□□□□ 0.54
HOMER3-201ENST00000221222 CTNNBIP1Q9NSA3 81 aaPredicted RBP18.42■□□□□ 0.54
HOMER3-201ENST00000221222 ZFP57Q9NU63 452 aa18.42■□□□□ 0.54
HOMER3-201ENST00000221222 TSSC4Q9Y5U2 329 aaPredicted RBP18.42■□□□□ 0.54
HOMER3-201ENST00000221222 MEGF8Q7Z7M0 2845 aa18.42■□□□□ 0.54
HOMER3-201ENST00000221222 ST8SIA3O43173 380 aa18.42■□□□□ 0.54
HOMER3-201ENST00000221222 RPLP1P05386 114 aaKnown RBP18.42■□□□□ 0.54
HOMER3-201ENST00000221222 CRYGCP07315 174 aa18.42■□□□□ 0.54
HOMER3-201ENST00000221222 SULT1A3P0DMM9 295 aa18.42■□□□□ 0.54
HOMER3-201ENST00000221222 SULT1A4P0DMN0 295 aa18.42■□□□□ 0.54
HOMER3-201ENST00000221222 PF4V1P10720 104 aa18.42■□□□□ 0.54
HOMER3-201ENST00000221222 RAB9AP51151 201 aa18.42■□□□□ 0.54
HOMER3-201ENST00000221222 PRCDQ00LT1 54 aa18.42■□□□□ 0.54
HOMER3-201ENST00000221222 TMEM65Q6PI78 240 aa18.42■□□□□ 0.54
HOMER3-201ENST00000221222 LCNL1Q6ZST4 164 aa18.42■□□□□ 0.54
HOMER3-201ENST00000221222 NDUFA11Q86Y39 141 aa18.42■□□□□ 0.54
HOMER3-201ENST00000221222 OR10W1Q8NGF6 305 aa18.42■□□□□ 0.54
HOMER3-201ENST00000221222 ZNF431Q8TF32 576 aaPredicted RBP18.42■□□□□ 0.54
HOMER3-201ENST00000221222 SLA2Q9H6Q3 261 aa18.42■□□□□ 0.54
HOMER3-201ENST00000221222 A0A1B0GU03 582 aa18.41■□□□□ 0.54
HOMER3-201ENST00000221222 ADARB2-AS1A8MUL3 147 aa18.41■□□□□ 0.54
HOMER3-201ENST00000221222 INMT-MINDY4F8WBC2 141 aa18.41■□□□□ 0.54
HOMER3-201ENST00000221222 SLC25A6P12236 298 aa18.41■□□□□ 0.54
HOMER3-201ENST00000221222 CTRB1P17538 263 aa18.41■□□□□ 0.54
HOMER3-201ENST00000221222 PSMB6P28072 239 aa18.41■□□□□ 0.54
HOMER3-201ENST00000221222 SMCO1Q147U7 214 aa18.41■□□□□ 0.54
HOMER3-201ENST00000221222 PRR31Q5SQ13 230 aa18.41■□□□□ 0.54
HOMER3-201ENST00000221222 CTRB2Q6GPI1 263 aa18.41■□□□□ 0.54
HOMER3-201ENST00000221222 OR52E5Q8NH55 327 aa18.41■□□□□ 0.54
HOMER3-201ENST00000221222 SEC22CQ9BRL7 303 aa18.41■□□□□ 0.54
HOMER3-201ENST00000221222 HINT2Q9BX68 163 aa18.41■□□□□ 0.54
HOMER3-201ENST00000221222 TRRAPQ9Y4A5 3859 aa18.4■□□□□ 0.54
HOMER3-201ENST00000221222 SPNP16150 400 aa18.4■□□□□ 0.54
HOMER3-201ENST00000221222 RPL23AP62750 156 aaKnown RBP18.4■□□□□ 0.54
HOMER3-201ENST00000221222 WT1-ASQ06250 92 aa18.4■□□□□ 0.54
HOMER3-201ENST00000221222 KIAA0141Q14154 515 aaPredicted RBP18.4■□□□□ 0.54
HOMER3-201ENST00000221222 PDLIM3Q53GG5 364 aaPredicted RBP18.4■□□□□ 0.54
HOMER3-201ENST00000221222 PDCD10Q9BUL8 212 aa18.4■□□□□ 0.54
HOMER3-201ENST00000221222 CACFD1Q9UGQ2 172 aa18.4■□□□□ 0.54
HOMER3-201ENST00000221222 PRAF2O60831 178 aa18.39■□□□□ 0.53
HOMER3-201ENST00000221222 HOXB5P09067 269 aa18.39■□□□□ 0.53
HOMER3-201ENST00000221222 CDX1P47902 265 aaPredicted RBP18.39■□□□□ 0.53
HOMER3-201ENST00000221222 KLK9Q2XQG4 91 aa18.39■□□□□ 0.53
HOMER3-201ENST00000221222 KLK9Q9UKQ9 250 aa18.39■□□□□ 0.53
HOMER3-201ENST00000221222 INS-IGF2F8WCM5 200 aa18.38■□□□□ 0.53
HOMER3-201ENST00000221222 IFNA17P01571 189 aa18.38■□□□□ 0.53
HOMER3-201ENST00000221222 SPCS3P61009 180 aa18.38■□□□□ 0.53
HOMER3-201ENST00000221222 KHDC1LQ5JSQ8 128 aa18.38■□□□□ 0.53
HOMER3-201ENST00000221222 GGNBP1Q5YKI7 109 aa18.38■□□□□ 0.53
HOMER3-201ENST00000221222 MRPL41Q8IXM3 137 aaKnown RBP18.38■□□□□ 0.53
HOMER3-201ENST00000221222 ZNF491Q8N8L2 437 aa18.38■□□□□ 0.53
HOMER3-201ENST00000221222 UBE2E2Q96LR5 201 aa18.38■□□□□ 0.53
HOMER3-201ENST00000221222 MS4A10Q96PG2 267 aa18.38■□□□□ 0.53
HOMER3-201ENST00000221222 ZNF355PQ9NSJ1 428 aa18.38■□□□□ 0.53
HOMER3-201ENST00000221222 TRBV9A0A0B4J1U6 114 aa18.37■□□□□ 0.53
HOMER3-201ENST00000221222 ADAP1O75689 374 aa18.37■□□□□ 0.53
HOMER3-201ENST00000221222 DHFRP00374 187 aa18.37■□□□□ 0.53
HOMER3-201ENST00000221222 TRGV3P03979 118 aa18.37■□□□□ 0.53
HOMER3-201ENST00000221222 REG1AP05451 166 aa18.37■□□□□ 0.53
HOMER3-201ENST00000221222 OR13C7P0DN81 318 aa18.37■□□□□ 0.53
HOMER3-201ENST00000221222 TPPP2P59282 170 aa18.37■□□□□ 0.53
HOMER3-201ENST00000221222 PLEKHA3Q9HB20 300 aa18.37■□□□□ 0.53
HOMER3-201ENST00000221222 GPN1Q9HCN4 374 aaPredicted RBP18.37■□□□□ 0.53
HOMER3-201ENST00000221222 PITX3O75364 302 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms