RNA–Protein interactions for RNA: ENST00000220429.12

GABPB1-201, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-201ENST00000220429 SPATA12Q7Z6I5 190 aa11.37□□□□□ -0.59
GABPB1-201ENST00000220429 ZNF295-AS1Q8N0V1 137 aa11.37□□□□□ -0.59
GABPB1-201ENST00000220429 HIF1ANQ9NWT6 349 aa11.37□□□□□ -0.59
GABPB1-201ENST00000220429 FAM186AA6NE01 2351 aa11.37□□□□□ -0.59
GABPB1-201ENST00000220429 OR4C46A6NHA9 309 aa11.37□□□□□ -0.59
GABPB1-201ENST00000220429 CELA3AP09093 270 aa11.37□□□□□ -0.59
GABPB1-201ENST00000220429 OR10AG1Q8NH19 301 aa11.37□□□□□ -0.59
GABPB1-201ENST00000220429 TAF15Q92804 592 aaKnown RBP eCLIP11.37□□□□□ -0.59
GABPB1-201ENST00000220429 RAB40CQ96S21 281 aa11.37□□□□□ -0.59
GABPB1-201ENST00000220429 KMT2EQ8IZD2 1858 aa11.36□□□□□ -0.59
GABPB1-201ENST00000220429 DOCK7Q96N67 2140 aa11.36□□□□□ -0.59
GABPB1-201ENST00000220429 H3BRM9 83 aa11.36□□□□□ -0.59
GABPB1-201ENST00000220429 BRI3O95415 125 aa11.36□□□□□ -0.59
GABPB1-201ENST00000220429 GPR183P32249 361 aa11.36□□□□□ -0.59
GABPB1-201ENST00000220429 FAM173AQ9BQD7 235 aa11.36□□□□□ -0.59
GABPB1-201ENST00000220429 OR2H1Q9GZK4 316 aa11.36□□□□□ -0.59
GABPB1-201ENST00000220429 ERRFI1Q9UJM3 462 aaPredicted RBP11.36□□□□□ -0.59
GABPB1-201ENST00000220429 PSG8Q9UQ74 426 aa11.36□□□□□ -0.59
GABPB1-201ENST00000220429 C2orf70A6NJV1 201 aa11.36□□□□□ -0.59
GABPB1-201ENST00000220429 ANKRD30BLA7E2S9 258 aa11.36□□□□□ -0.59
GABPB1-201ENST00000220429 CLDN1O95832 211 aa11.36□□□□□ -0.59
GABPB1-201ENST00000220429 ADH4P08319 380 aa11.36□□□□□ -0.59
GABPB1-201ENST00000220429 HBG1P69891 147 aa11.36□□□□□ -0.59
GABPB1-201ENST00000220429 HBG2P69892 147 aa11.36□□□□□ -0.59
GABPB1-201ENST00000220429 ABHD17BQ5VST6 288 aa11.36□□□□□ -0.59
GABPB1-201ENST00000220429 ACSM6Q6P461 480 aa11.36□□□□□ -0.59
GABPB1-201ENST00000220429 TBC1D26Q86UD7 250 aa11.36□□□□□ -0.59
GABPB1-201ENST00000220429 OR10G9Q8NGN4 311 aa11.36□□□□□ -0.59
GABPB1-201ENST00000220429 OR10G7Q8NGN6 311 aa11.36□□□□□ -0.59
GABPB1-201ENST00000220429 OR4C12Q96R67 309 aa11.36□□□□□ -0.59
GABPB1-201ENST00000220429 HES4Q9HCC6 221 aa11.36□□□□□ -0.59
GABPB1-201ENST00000220429 CRIM1Q9NZV1 1036 aa11.36□□□□□ -0.59
GABPB1-201ENST00000220429 JPT1Q9UK76 154 aa11.36□□□□□ -0.59
GABPB1-201ENST00000220429 TRBV20OR9-2A0A075B6H5 130 aa11.35□□□□□ -0.59
GABPB1-201ENST00000220429 hDV102S1A0JD36 115 aa11.35□□□□□ -0.59
GABPB1-201ENST00000220429 M0R2Z0 102 aa11.35□□□□□ -0.59
GABPB1-201ENST00000220429 MT-CO3P00414 261 aa11.35□□□□□ -0.59
GABPB1-201ENST00000220429 IGHV3-9P01782 118 aa11.35□□□□□ -0.59
GABPB1-201ENST00000220429 USF1P22415 310 aaPredicted RBP11.35□□□□□ -0.59
GABPB1-201ENST00000220429 RPEL1Q2QD12 228 aa11.35□□□□□ -0.59
GABPB1-201ENST00000220429 TMEM164Q5U3C3 297 aa11.35□□□□□ -0.59
GABPB1-201ENST00000220429 IGKV1-27A0A075B6S5 117 aa11.35□□□□□ -0.59
GABPB1-201ENST00000220429 C21orf140B9A014 251 aa11.35□□□□□ -0.59
GABPB1-201ENST00000220429 HSBP1O75506 76 aa11.35□□□□□ -0.59
GABPB1-201ENST00000220429 SLC25A6P12236 298 aa11.35□□□□□ -0.59
GABPB1-201ENST00000220429 GATA3P23771 443 aa11.35□□□□□ -0.59
GABPB1-201ENST00000220429 MMD2Q8IY49 270 aa11.35□□□□□ -0.59
GABPB1-201ENST00000220429 OCC1Q8TAD7 63 aa11.35□□□□□ -0.59
GABPB1-201ENST00000220429 VSTM2AQ8TAG5 236 aa11.35□□□□□ -0.59
GABPB1-201ENST00000220429 MRPL16Q9NX20 251 aaKnown RBP11.35□□□□□ -0.59
GABPB1-201ENST00000220429 A0A0G2JLM5 398 aa11.34□□□□□ -0.59
GABPB1-201ENST00000220429 BMPR1BO00238 502 aa11.34□□□□□ -0.59
GABPB1-201ENST00000220429 ANGPTL7O43827 346 aa11.34□□□□□ -0.59
GABPB1-201ENST00000220429 FABP6P51161 128 aa11.34□□□□□ -0.59
GABPB1-201ENST00000220429 SRYQ05066 204 aa11.34□□□□□ -0.59
GABPB1-201ENST00000220429 SPATA31B1PQ5VZV4 182 aa11.34□□□□□ -0.59
GABPB1-201ENST00000220429 INO80CQ6PI98 192 aaPredicted RBP11.34□□□□□ -0.59
GABPB1-201ENST00000220429 TMEM136Q6ZRR5 245 aa11.34□□□□□ -0.59
GABPB1-201ENST00000220429 TMEM45BQ96B21 275 aa11.34□□□□□ -0.59
GABPB1-201ENST00000220429 Q96M66 194 aa11.34□□□□□ -0.59
GABPB1-201ENST00000220429 NAA38Q9BRA0 125 aaKnown RBP11.34□□□□□ -0.59
GABPB1-201ENST00000220429 HINT2Q9BX68 163 aa11.34□□□□□ -0.59
GABPB1-201ENST00000220429 SCRT2Q9NQ03 307 aa11.34□□□□□ -0.59
GABPB1-201ENST00000220429 TIMM9Q9Y5J7 89 aa11.34□□□□□ -0.59
GABPB1-201ENST00000220429 SPCS1Q9Y6A9 102 aa11.34□□□□□ -0.59
GABPB1-201ENST00000220429 R4GN57 208 aa11.34□□□□□ -0.59
GABPB1-201ENST00000220429 FRYQ5TBA9 3013 aa11.34□□□□□ -0.59
GABPB1-201ENST00000220429 UBE2L5PA0A1B0GUS4 154 aa11.34□□□□□ -0.59
GABPB1-201ENST00000220429 J3QR89 54 aa11.34□□□□□ -0.59
GABPB1-201ENST00000220429 SPRY1O43609 319 aaPredicted RBP11.34□□□□□ -0.59
GABPB1-201ENST00000220429 CCL2P13500 99 aa11.34□□□□□ -0.59
GABPB1-201ENST00000220429 HTR1DP28221 377 aa11.34□□□□□ -0.59
GABPB1-201ENST00000220429 ATP5G3P48201 142 aa11.34□□□□□ -0.59
GABPB1-201ENST00000220429 OR1C1Q15619 314 aa11.34□□□□□ -0.59
GABPB1-201ENST00000220429 TNXAQ16473 311 aa11.34□□□□□ -0.59
GABPB1-201ENST00000220429 DHRS13Q6UX07 377 aa11.34□□□□□ -0.59
GABPB1-201ENST00000220429 TMEM70Q9BUB7 260 aa11.34□□□□□ -0.59
GABPB1-201ENST00000220429 GP6Q9HCN6 339 aa11.34□□□□□ -0.59
GABPB1-201ENST00000220429 SHANK1Q9Y566 2161 aa11.33□□□□□ -0.6
GABPB1-201ENST00000220429 IGKV3D-15A0A087WSY6 115 aa11.33□□□□□ -0.6
GABPB1-201ENST00000220429 RHBDL1O75783 438 aa11.33□□□□□ -0.6
GABPB1-201ENST00000220429 MAGEA5P43359 124 aa11.33□□□□□ -0.6
GABPB1-201ENST00000220429 LINC00696Q6ZRV3 163 aa11.33□□□□□ -0.6
GABPB1-201ENST00000220429 SPSB4Q96A44 273 aa11.33□□□□□ -0.6
GABPB1-201ENST00000220429 TTTY12Q9BZ98 90 aa11.33□□□□□ -0.6
GABPB1-201ENST00000220429 KCNIP2Q9NS61 270 aa11.33□□□□□ -0.6
GABPB1-201ENST00000220429 KCNIP1Q9NZI2 227 aa11.33□□□□□ -0.6
GABPB1-201ENST00000220429 URB1O60287 2271 aaKnown RBP11.33□□□□□ -0.6
GABPB1-201ENST00000220429 A0A1B0GW15 77 aa11.33□□□□□ -0.6
GABPB1-201ENST00000220429 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.33□□□□□ -0.6
GABPB1-201ENST00000220429 UQCRFS1P47985 274 aa11.33□□□□□ -0.6
GABPB1-201ENST00000220429 PCBD1P61457 104 aa11.33□□□□□ -0.6
GABPB1-201ENST00000220429 PMP22Q01453 160 aa11.33□□□□□ -0.6
GABPB1-201ENST00000220429 TMEM42Q69YG0 159 aa11.33□□□□□ -0.6
GABPB1-201ENST00000220429 C18orf32Q8TCD1 76 aa11.33□□□□□ -0.6
GABPB1-201ENST00000220429 LOC400499M0QZD8 3231 aa11.32□□□□□ -0.6
GABPB1-201ENST00000220429 hCG_38984A0A1B0GV85 526 aa11.32□□□□□ -0.6
GABPB1-201ENST00000220429 SPINK4O60575 86 aa11.32□□□□□ -0.6
GABPB1-201ENST00000220429 MRPL33O75394 65 aaKnown RBP11.32□□□□□ -0.6
GABPB1-201ENST00000220429 PPYP01298 95 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms