RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 NAGKQ9UJ70 344 aa10.92□□□□□ -0.66
SRP54-201ENST00000216774 SLC45A2Q9UMX9 530 aa10.92□□□□□ -0.66
SRP54-201ENST00000216774 IGLV3-9A0A075B6K5 115 aa10.91□□□□□ -0.66
SRP54-201ENST00000216774 M0R1B8 84 aa10.91□□□□□ -0.66
SRP54-201ENST00000216774 FOXH1O75593 365 aa10.91□□□□□ -0.66
SRP54-201ENST00000216774 IGFBP2P18065 325 aa10.91□□□□□ -0.66
SRP54-201ENST00000216774 HNF1AP20823 631 aa10.91□□□□□ -0.66
SRP54-201ENST00000216774 OR10J1P30954 320 aa10.91□□□□□ -0.66
SRP54-201ENST00000216774 LGALS4P56470 323 aa10.91□□□□□ -0.66
SRP54-201ENST00000216774 PAFAH1B2P68402 229 aa10.91□□□□□ -0.66
SRP54-201ENST00000216774 HLA-DRB5Q30154 266 aa10.91□□□□□ -0.66
SRP54-201ENST00000216774 C1orf194Q5T5A4 169 aa10.91□□□□□ -0.66
SRP54-201ENST00000216774 LYG1Q8N1E2 194 aa10.91□□□□□ -0.66
SRP54-201ENST00000216774 SLC35E1Q96K37 410 aa10.91□□□□□ -0.66
SRP54-201ENST00000216774 PLEKHA3Q9HB20 300 aa10.91□□□□□ -0.66
SRP54-201ENST00000216774 TRBV9A0A0B4J1U6 114 aa10.91□□□□□ -0.66
SRP54-201ENST00000216774 KIR2DL5BA0A0G2JN68 375 aa10.91□□□□□ -0.66
SRP54-201ENST00000216774 KIR2DL5BA0A0G2JPC4 375 aa10.91□□□□□ -0.66
SRP54-201ENST00000216774 SPRY3O43610 288 aa10.91□□□□□ -0.66
SRP54-201ENST00000216774 RNF224P0DH78 156 aa10.91□□□□□ -0.66
SRP54-201ENST00000216774 PRCDQ00LT1 54 aa10.91□□□□□ -0.66
SRP54-201ENST00000216774 SRSF6Q13247 344 aaKnown RBP10.91□□□□□ -0.66
SRP54-201ENST00000216774 USF2Q15853 346 aaPredicted RBP10.91□□□□□ -0.66
SRP54-201ENST00000216774 STUMQ69YW2 141 aa10.91□□□□□ -0.66
SRP54-201ENST00000216774 SEM1Q6ZVN7 128 aa10.91□□□□□ -0.66
SRP54-201ENST00000216774 KIR2DL5AQ8N109 375 aa10.91□□□□□ -0.66
SRP54-201ENST00000216774 WFIKKN1Q96NZ8 548 aa10.91□□□□□ -0.66
SRP54-201ENST00000216774 C19orf24Q9BVV8 132 aa10.91□□□□□ -0.66
SRP54-201ENST00000216774 RNF7Q9UBF6 113 aa10.91□□□□□ -0.66
SRP54-201ENST00000216774 A0A1B0GUS0 222 aa10.9□□□□□ -0.66
SRP54-201ENST00000216774 J3QR06 171 aa10.9□□□□□ -0.66
SRP54-201ENST00000216774 NUPR1O60356 82 aa10.9□□□□□ -0.66
SRP54-201ENST00000216774 SNRPCP09234 159 aaKnown RBP10.9□□□□□ -0.66
SRP54-201ENST00000216774 OR10J4P0C629 311 aa10.9□□□□□ -0.66
SRP54-201ENST00000216774 SELLP14151 372 aa10.9□□□□□ -0.66
SRP54-201ENST00000216774 NDUFB7P17568 137 aa10.9□□□□□ -0.66
SRP54-201ENST00000216774 CBLN1P23435 193 aa10.9□□□□□ -0.66
SRP54-201ENST00000216774 TPPP2P59282 170 aa10.9□□□□□ -0.66
SRP54-201ENST00000216774 ERVFC1-1P60608 527 aa10.9□□□□□ -0.66
SRP54-201ENST00000216774 RPEL1Q2QD12 228 aa10.9□□□□□ -0.66
SRP54-201ENST00000216774 MIR17HGQ75NE6 70 aa10.9□□□□□ -0.66
SRP54-201ENST00000216774 PNKDQ8N490 385 aa10.9□□□□□ -0.66
SRP54-201ENST00000216774 ZCCHC14Q8WYQ9 949 aaKnown RBP10.9□□□□□ -0.66
SRP54-201ENST00000216774 MRPL18Q9H0U6 180 aaKnown RBP10.9□□□□□ -0.66
SRP54-201ENST00000216774 IL19Q9UHD0 177 aa10.9□□□□□ -0.66
SRP54-201ENST00000216774 URB1O60287 2271 aaKnown RBP10.9□□□□□ -0.67
SRP54-201ENST00000216774 SLC17A3O00476 420 aa10.89□□□□□ -0.67
SRP54-201ENST00000216774 UPK2O00526 184 aa10.89□□□□□ -0.67
SRP54-201ENST00000216774 TM4SF5O14894 197 aa10.89□□□□□ -0.67
SRP54-201ENST00000216774 RTL8BQ17RB0 113 aa10.89□□□□□ -0.67
SRP54-201ENST00000216774 NABP2Q9BQ15 211 aa10.89□□□□□ -0.67
SRP54-201ENST00000216774 ASCL3Q9NQ33 180 aa10.89□□□□□ -0.67
SRP54-201ENST00000216774 TECRQ9NZ01 308 aaKnown RBP10.89□□□□□ -0.67
SRP54-201ENST00000216774 POLR3KQ9Y2Y1 108 aaPredicted RBP10.89□□□□□ -0.67
SRP54-201ENST00000216774 PRR14LQ5THK1 2151 aa10.89□□□□□ -0.67
SRP54-201ENST00000216774 CRISP2P16562 243 aa10.89□□□□□ -0.67
SRP54-201ENST00000216774 GNG4P50150 75 aa10.89□□□□□ -0.67
SRP54-201ENST00000216774 RANP62826 216 aaKnown RBP10.89□□□□□ -0.67
SRP54-201ENST00000216774 RPL19P84098 196 aaKnown RBP10.89□□□□□ -0.67
SRP54-201ENST00000216774 PSG5Q15238 335 aa10.89□□□□□ -0.67
SRP54-201ENST00000216774 PQLC2Q6ZP29 291 aa10.89□□□□□ -0.67
SRP54-201ENST00000216774 MMD2Q8IY49 270 aa10.89□□□□□ -0.67
SRP54-201ENST00000216774 OR1L6Q8NGR2 347 aa10.89□□□□□ -0.67
SRP54-201ENST00000216774 LRFN3Q9BTN0 628 aa10.89□□□□□ -0.67
SRP54-201ENST00000216774 HINT2Q9BX68 163 aa10.89□□□□□ -0.67
SRP54-201ENST00000216774 GCM1Q9NP62 436 aa10.89□□□□□ -0.67
SRP54-201ENST00000216774 V9GYV3 84 aa10.89□□□□□ -0.67
SRP54-201ENST00000216774 GRIFINA4D1Z8 144 aa10.88□□□□□ -0.67
SRP54-201ENST00000216774 HELTA6NFD8 242 aa10.88□□□□□ -0.67
SRP54-201ENST00000216774 WT1P19544 449 aaPredicted RBP10.88□□□□□ -0.67
SRP54-201ENST00000216774 C2orf83Q53S99 150 aa10.88□□□□□ -0.67
SRP54-201ENST00000216774 SLC25A48Q6ZT89 311 aaKnown RBP10.88□□□□□ -0.67
SRP54-201ENST00000216774 GAFA1Q96PS6 74 aa10.88□□□□□ -0.67
SRP54-201ENST00000216774 GNB1LQ9BYB4 327 aa10.88□□□□□ -0.67
SRP54-201ENST00000216774 TMEM106BQ9NUM4 274 aa10.88□□□□□ -0.67
SRP54-201ENST00000216774 TP53TG3Q9ULZ0 132 aa10.88□□□□□ -0.67
SRP54-201ENST00000216774 NBEAQ8NFP9 2946 aa10.88□□□□□ -0.67
SRP54-201ENST00000216774 ACTL6BO94805 426 aa10.88□□□□□ -0.67
SRP54-201ENST00000216774 TAS2R45P59539 299 aa10.88□□□□□ -0.67
SRP54-201ENST00000216774 SELENOVP59797 346 aa10.88□□□□□ -0.67
SRP54-201ENST00000216774 Q0VG73 95 aa10.88□□□□□ -0.67
SRP54-201ENST00000216774 CENPWQ5EE01 88 aa10.88□□□□□ -0.67
SRP54-201ENST00000216774 FAM201AQ5SY85 155 aa10.88□□□□□ -0.67
SRP54-201ENST00000216774 ALKBH2Q6NS38 261 aa10.88□□□□□ -0.67
SRP54-201ENST00000216774 VHLLQ6RSH7 139 aa10.88□□□□□ -0.67
SRP54-201ENST00000216774 ZNF474Q6S9Z5 364 aaPredicted RBP10.88□□□□□ -0.67
SRP54-201ENST00000216774 PIP4P1Q86T03 277 aa10.88□□□□□ -0.67
SRP54-201ENST00000216774 OR5B3Q8NH48 314 aa10.88□□□□□ -0.67
SRP54-201ENST00000216774 RPUSD1Q9UJJ7 312 aaKnown RBP10.88□□□□□ -0.67
SRP54-201ENST00000216774 DSPP15924 2871 aaKnown RBP10.87□□□□□ -0.67
SRP54-201ENST00000216774 FCN1O00602 326 aa10.87□□□□□ -0.67
SRP54-201ENST00000216774 CEACAM4O75871 244 aa10.87□□□□□ -0.67
SRP54-201ENST00000216774 OR5G3P0C626 314 aa10.87□□□□□ -0.67
SRP54-201ENST00000216774 CT45A6P0DMU7 189 aa10.87□□□□□ -0.67
SRP54-201ENST00000216774 CT45A5P0DMU8 189 aa10.87□□□□□ -0.67
SRP54-201ENST00000216774 CT45A7P0DMV0 189 aa10.87□□□□□ -0.67
SRP54-201ENST00000216774 MYOD1P15172 320 aa10.87□□□□□ -0.67
SRP54-201ENST00000216774 LINC00310P59036 64 aa10.87□□□□□ -0.67
SRP54-201ENST00000216774 TNFAIP6P98066 277 aaPredicted RBP10.87□□□□□ -0.67
SRP54-201ENST00000216774 DMRTC2Q8IXT2 367 aaPredicted RBP10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms