RNA–Protein interactions for RNA: ENST00000211998.9

VCL-201, Transcript of vinculin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VCL, Length 5,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-201ENST00000211998 CGB1A6NKQ9 187 aa8.86□□□□□ -0.99
VCL-201ENST00000211998 PRDX2P32119 198 aa8.86□□□□□ -0.99
VCL-201ENST00000211998 ID1P41134 155 aa8.86□□□□□ -0.99
VCL-201ENST00000211998 CX3CL1P78423 397 aa8.86□□□□□ -0.99
VCL-201ENST00000211998 GCSAMQ8N6F7 178 aa8.86□□□□□ -0.99
VCL-201ENST00000211998 PLPPR1Q8TBJ4 325 aa8.86□□□□□ -0.99
VCL-201ENST00000211998 IGKV1-8A0A0C4DH67 115 aa8.85□□□□□ -0.99
VCL-201ENST00000211998 A0A0J9YW62 118 aa8.85□□□□□ -0.99
VCL-201ENST00000211998 MGST3O14880 152 aa8.85□□□□□ -0.99
VCL-201ENST00000211998 ZNF658BQ4V348 819 aaPredicted RBP8.85□□□□□ -0.99
VCL-201ENST00000211998 COPS9Q8WXC6 57 aa8.85□□□□□ -0.99
VCL-201ENST00000211998 EAF1Q96JC9 268 aaPredicted RBP8.85□□□□□ -0.99
VCL-201ENST00000211998 PLSCR4Q9NRQ2 329 aa8.85□□□□□ -0.99
VCL-201ENST00000211998 A0A1B0GW15 77 aa8.85□□□□□ -0.99
VCL-201ENST00000211998 PRR33A8MZF0 331 aa8.85□□□□□ -0.99
VCL-201ENST00000211998 ZNHIT1O43257 154 aa8.85□□□□□ -0.99
VCL-201ENST00000211998 C3orf79P0CE67 100 aa8.85□□□□□ -0.99
VCL-201ENST00000211998 GEMIN7Q9H840 131 aaKnown RBP8.85□□□□□ -0.99
VCL-201ENST00000211998 LOC105371242A0A075B767 164 aa8.85□□□□□ -0.99
VCL-201ENST00000211998 PPIAL4CA0A0B4J2A2 164 aa8.85□□□□□ -0.99
VCL-201ENST00000211998 hDV102S1A0JD36 115 aa8.85□□□□□ -0.99
VCL-201ENST00000211998 PPIAL4GP0DN37 164 aa8.85□□□□□ -0.99
VCL-201ENST00000211998 SELLP14151 372 aa8.85□□□□□ -0.99
VCL-201ENST00000211998 PRTN3P24158 256 aa8.85□□□□□ -0.99
VCL-201ENST00000211998 CACNG7P62955 275 aa8.85□□□□□ -0.99
VCL-201ENST00000211998 GDF15Q99988 308 aa8.85□□□□□ -0.99
VCL-201ENST00000211998 UBR3Q6ZT12 1888 aa8.85□□□□□ -0.99
VCL-201ENST00000211998 TMPRSS3P57727 454 aa8.85□□□□□ -0.99
VCL-201ENST00000211998 VSIRQ9H7M9 311 aa8.85□□□□□ -0.99
VCL-201ENST00000211998 RPL27AP46776 148 aaKnown RBP8.84□□□□□ -0.99
VCL-201ENST00000211998 TMEM249Q2WGJ8 235 aa8.84□□□□□ -0.99
VCL-201ENST00000211998 ZNF48Q96MX3 618 aaPredicted RBP8.84□□□□□ -0.99
VCL-201ENST00000211998 CKAP5Q14008 2032 aa8.84□□□□□ -0.99
VCL-201ENST00000211998 CHD5Q8TDI0 1954 aa8.84□□□□□ -0.99
VCL-201ENST00000211998 CD5LO43866 347 aa8.84□□□□□ -0.99
VCL-201ENST00000211998 FOXL1Q12952 345 aa8.84□□□□□ -0.99
VCL-201ENST00000211998 SHISA5Q8N114 240 aa8.84□□□□□ -0.99
VCL-201ENST00000211998 SLC22A18ASQ8N1D0 253 aa8.84□□□□□ -0.99
VCL-201ENST00000211998 OR9G4Q8NGQ1 327 aa8.84□□□□□ -0.99
VCL-201ENST00000211998 DYNLRB2Q8TF09 96 aa8.84□□□□□ -0.99
VCL-201ENST00000211998 SCGB3A1Q96QR1 104 aa8.84□□□□□ -0.99
VCL-201ENST00000211998 C20orf144Q9BQM9 153 aa8.84□□□□□ -0.99
VCL-201ENST00000211998 PHLDA3Q9Y5J5 127 aa8.84□□□□□ -0.99
VCL-201ENST00000211998 UCP2P55851 309 aa8.84□□□□□ -0.99
VCL-201ENST00000211998 MEIG1Q5JSS6 88 aa8.84□□□□□ -0.99
VCL-201ENST00000211998 PCSK4Q6UW60 755 aa8.84□□□□□ -0.99
VCL-201ENST00000211998 MIR17HGQ75NE6 70 aa8.84□□□□□ -0.99
VCL-201ENST00000211998 LINC00305Q7Z4B0 112 aa8.84□□□□□ -0.99
VCL-201ENST00000211998 ORMDL3Q8N138 153 aa8.84□□□□□ -0.99
VCL-201ENST00000211998 CHCHD1Q96BP2 118 aaKnown RBP8.84□□□□□ -0.99
VCL-201ENST00000211998 GPR82Q96P67 336 aa8.84□□□□□ -0.99
VCL-201ENST00000211998 TM2D1Q9BX74 207 aa8.84□□□□□ -0.99
VCL-201ENST00000211998 OSTCQ9NRP0 149 aa8.84□□□□□ -0.99
VCL-201ENST00000211998 TRBV6-7A0A0A0MS04 114 aa8.84□□□□□ -0.99
VCL-201ENST00000211998 A0A1W2PRE2 83 aa8.84□□□□□ -0.99
VCL-201ENST00000211998 LEPP41159 167 aa8.84□□□□□ -0.99
VCL-201ENST00000211998 C19orf54Q5BKX5 351 aa8.84□□□□□ -0.99
VCL-201ENST00000211998 ADAMTSL5Q6ZMM2 481 aa8.84□□□□□ -0.99
VCL-201ENST00000211998 MRPS16Q9Y3D3 137 aaKnown RBP8.84□□□□□ -0.99
VCL-201ENST00000211998 FOCADQ5VW36 1801 aa8.84□□□□□ -0.99
VCL-201ENST00000211998 LY75O60449 1722 aa8.84□□□□□ -0.99
VCL-201ENST00000211998 TDGF1P13385 188 aa8.84□□□□□ -1
VCL-201ENST00000211998 IGFBP2P18065 325 aa8.84□□□□□ -1
VCL-201ENST00000211998 MC5RP33032 325 aa8.84□□□□□ -1
VCL-201ENST00000211998 NPIPB3Q92617 1050 aa8.84□□□□□ -1
VCL-201ENST00000211998 GFI1Q99684 422 aa8.84□□□□□ -1
VCL-201ENST00000211998 CCDC88CQ9P219 2028 aa8.83□□□□□ -1
VCL-201ENST00000211998 IGHV3-48P01763 117 aa8.83□□□□□ -1
VCL-201ENST00000211998 RAB9AP51151 201 aa8.83□□□□□ -1
VCL-201ENST00000211998 LOXL3P58215 753 aa8.83□□□□□ -1
VCL-201ENST00000211998 ERVK11-1P61568 191 aa8.83□□□□□ -1
VCL-201ENST00000211998 CLEC2AQ6UVW9 174 aa8.83□□□□□ -1
VCL-201ENST00000211998 TMEM56-RWDD3S4R434 201 aa8.83□□□□□ -1
VCL-201ENST00000211998 KNL1Q8NG31 2342 aa8.83□□□□□ -1
VCL-201ENST00000211998 KIR3DS1Q14943 382 aa8.83□□□□□ -1
VCL-201ENST00000211998 BCL6BQ8N143 479 aaPredicted RBP8.83□□□□□ -1
VCL-201ENST00000211998 RNASEH2CQ8TDP1 164 aaKnown RBP8.83□□□□□ -1
VCL-201ENST00000211998 DNASE2BQ8WZ79 361 aa8.83□□□□□ -1
VCL-201ENST00000211998 SCN4AP35499 1836 aa8.83□□□□□ -1
VCL-201ENST00000211998 TRPM6Q9BX84 2022 aa8.83□□□□□ -1
VCL-201ENST00000211998 A0A087WV48 116 aa8.83□□□□□ -1
VCL-201ENST00000211998 A0A1W2PQM1 296 aa8.83□□□□□ -1
VCL-201ENST00000211998 IGHV2-5P01817 119 aa8.83□□□□□ -1
VCL-201ENST00000211998 PSG9Q00887 426 aa8.83□□□□□ -1
VCL-201ENST00000211998 RNFT1Q5M7Z0 435 aa8.83□□□□□ -1
VCL-201ENST00000211998 MRAP2Q96G30 205 aa8.83□□□□□ -1
VCL-201ENST00000211998 CHODLQ9H9P2 273 aa8.83□□□□□ -1
VCL-201ENST00000211998 PTPRFP10586 1907 aa8.83□□□□□ -1
VCL-201ENST00000211998 TRAV8-1A0A0A6YYK1 113 aa8.82□□□□□ -1
VCL-201ENST00000211998 TIMP3P35625 211 aa8.82□□□□□ -1
VCL-201ENST00000211998 OR4A5Q8NH83 315 aa8.82□□□□□ -1
VCL-201ENST00000211998 COLQQ9Y215 455 aaPredicted RBP8.82□□□□□ -1
VCL-201ENST00000211998 SHANK3Q9BYB0 1731 aa8.82□□□□□ -1
VCL-201ENST00000211998 NPIPB6E9PJ23 425 aa8.82□□□□□ -1
VCL-201ENST00000211998 HBDP02042 147 aa8.82□□□□□ -1
VCL-201ENST00000211998 IGFBP3P17936 291 aaPredicted RBP8.82□□□□□ -1
VCL-201ENST00000211998 GUSBP1Q15486 140 aa8.82□□□□□ -1
VCL-201ENST00000211998 TMEM155Q4W5P6 130 aa8.82□□□□□ -1
VCL-201ENST00000211998 OR13C6PQ8NH95 151 aa8.82□□□□□ -1
VCL-201ENST00000211998 KIR2DL4Q99706 377 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms