RNA–Protein interactions for RNA: ENST00000054666.10

VAMP3-201, Transcript of vesicle associated membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP3, Length 2,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-201ENST00000054666 RPL8P62917 257 aaKnown RBP6.73□□□□□ -1.33
VAMP3-201ENST00000054666 TMEM249Q2WGJ8 235 aa6.73□□□□□ -1.33
VAMP3-201ENST00000054666 ZNF672Q499Z4 452 aaPredicted RBP6.73□□□□□ -1.33
VAMP3-201ENST00000054666 ARSJQ5FYB0 599 aaPredicted RBP6.73□□□□□ -1.33
VAMP3-201ENST00000054666 GCSAMLQ5JQS6 135 aa6.73□□□□□ -1.33
VAMP3-201ENST00000054666 OR1L8Q8NGR8 309 aa6.73□□□□□ -1.33
VAMP3-201ENST00000054666 NANPQ8TBE9 248 aa6.73□□□□□ -1.33
VAMP3-201ENST00000054666 ZNF596Q8TC21 504 aa6.73□□□□□ -1.33
VAMP3-201ENST00000054666 SSMEM1Q8WWF3 244 aa6.73□□□□□ -1.33
VAMP3-201ENST00000054666 PCGF1Q9BSM1 259 aa6.73□□□□□ -1.33
VAMP3-201ENST00000054666 PARLQ9H300 379 aa6.73□□□□□ -1.33
VAMP3-201ENST00000054666 TMEM242Q9NWH2 141 aa6.73□□□□□ -1.33
VAMP3-201ENST00000054666 LSM4Q9Y4Z0 139 aaKnown RBP6.73□□□□□ -1.33
VAMP3-201ENST00000054666 URGCP-MRPS24S4R325 110 aa6.73□□□□□ -1.33
VAMP3-201ENST00000054666 DMXL2Q8TDJ6 3036 aa6.73□□□□□ -1.33
VAMP3-201ENST00000054666 A0A087X0M5 115 aa6.73□□□□□ -1.33
VAMP3-201ENST00000054666 TEX50A0A1B0GTY4 177 aa6.73□□□□□ -1.33
VAMP3-201ENST00000054666 A0A1B0GX30 115 aa6.73□□□□□ -1.33
VAMP3-201ENST00000054666 A0A1W2PN81 502 aa6.73□□□□□ -1.33
VAMP3-201ENST00000054666 SRRM4A7MD48 611 aaKnown RBP6.73□□□□□ -1.33
VAMP3-201ENST00000054666 PDE6DO43924 150 aa6.73□□□□□ -1.33
VAMP3-201ENST00000054666 YIF1AO95070 293 aa6.73□□□□□ -1.33
VAMP3-201ENST00000054666 CXorf1O96002 111 aa6.73□□□□□ -1.33
VAMP3-201ENST00000054666 CHRNA7P36544 502 aa6.73□□□□□ -1.33
VAMP3-201ENST00000054666 RPL35P42766 123 aaKnown RBP6.73□□□□□ -1.33
VAMP3-201ENST00000054666 ZNF137PP52743 207 aa6.73□□□□□ -1.33
VAMP3-201ENST00000054666 RHOBP62745 196 aa6.73□□□□□ -1.33
VAMP3-201ENST00000054666 ERHP84090 104 aaKnown RBP6.73□□□□□ -1.33
VAMP3-201ENST00000054666 ELOBQ15370 118 aa6.73□□□□□ -1.33
VAMP3-201ENST00000054666 TMEM241Q24JQ0 296 aa6.73□□□□□ -1.33
VAMP3-201ENST00000054666 VMA21Q3ZAQ7 101 aa6.73□□□□□ -1.33
VAMP3-201ENST00000054666 C2orf83Q53S99 150 aa6.73□□□□□ -1.33
VAMP3-201ENST00000054666 STPG3Q8N7X2 389 aa6.73□□□□□ -1.33
VAMP3-201ENST00000054666 TNFRSF14Q92956 283 aa6.73□□□□□ -1.33
VAMP3-201ENST00000054666 NABP2Q9BQ15 211 aa6.73□□□□□ -1.33
VAMP3-201ENST00000054666 TXNDC17Q9BRA2 123 aa6.73□□□□□ -1.33
VAMP3-201ENST00000054666 CTDSP1Q9GZU7 261 aa6.73□□□□□ -1.33
VAMP3-201ENST00000054666 RALYQ9UKM9 306 aaKnown RBP6.73□□□□□ -1.33
VAMP3-201ENST00000054666 KLF2Q9Y5W3 355 aaPredicted RBP6.73□□□□□ -1.33
VAMP3-201ENST00000054666 ARL14EPLP0DKL9 152 aa6.72□□□□□ -1.33
VAMP3-201ENST00000054666 GRNP28799 593 aaKnown RBP6.72□□□□□ -1.33
VAMP3-201ENST00000054666 MC5RP33032 325 aa6.72□□□□□ -1.33
VAMP3-201ENST00000054666 RPL29P47914 159 aaKnown RBP6.72□□□□□ -1.33
VAMP3-201ENST00000054666 PPOXP50336 477 aa6.72□□□□□ -1.33
VAMP3-201ENST00000054666 DLX6P56179 175 aa6.72□□□□□ -1.33
VAMP3-201ENST00000054666 BSXQ3C1V8 233 aa6.72□□□□□ -1.33
VAMP3-201ENST00000054666 CST9LP1Q5W188 147 aa6.72□□□□□ -1.33
VAMP3-201ENST00000054666 SPNS3Q6ZMD2 512 aa6.72□□□□□ -1.33
VAMP3-201ENST00000054666 C1QL4Q86Z23 238 aa6.72□□□□□ -1.33
VAMP3-201ENST00000054666 Q8WTZ3 238 aa6.72□□□□□ -1.33
VAMP3-201ENST00000054666 GATAD1Q8WUU5 269 aa6.72□□□□□ -1.33
VAMP3-201ENST00000054666 YPEL4Q96NS1 127 aa6.72□□□□□ -1.33
VAMP3-201ENST00000054666 TMEM133Q9H2Q1 129 aa6.72□□□□□ -1.33
VAMP3-201ENST00000054666 F6UZH7 168 aa6.72□□□□□ -1.33
VAMP3-201ENST00000054666 DLL1O00548 723 aa6.72□□□□□ -1.33
VAMP3-201ENST00000054666 STAG3L2P0CL84 134 aa6.72□□□□□ -1.33
VAMP3-201ENST00000054666 STAG3L3P0CL85 134 aa6.72□□□□□ -1.33
VAMP3-201ENST00000054666 UBE2G2P60604 165 aa6.72□□□□□ -1.33
VAMP3-201ENST00000054666 ADORA2A-AS1P86434 159 aa6.72□□□□□ -1.33
VAMP3-201ENST00000054666 ZNF343Q6P1L6 599 aa6.72□□□□□ -1.33
VAMP3-201ENST00000054666 TMEM144Q7Z5S9 345 aa6.72□□□□□ -1.33
VAMP3-201ENST00000054666 MRPL41Q8IXM3 137 aaKnown RBP6.72□□□□□ -1.33
VAMP3-201ENST00000054666 OR8B3Q8NGG8 313 aa6.72□□□□□ -1.33
VAMP3-201ENST00000054666 TMEM167AQ8TBQ9 72 aa6.72□□□□□ -1.33
VAMP3-201ENST00000054666 SLC35E1Q96K37 410 aa6.72□□□□□ -1.33
VAMP3-201ENST00000054666 OR8B2Q96RD0 313 aa6.72□□□□□ -1.33
VAMP3-201ENST00000054666 RAB1BQ9H0U4 201 aa6.72□□□□□ -1.33
VAMP3-201ENST00000054666 TGOLN2O43493 480 aa6.71□□□□□ -1.34
VAMP3-201ENST00000054666 FSTL3O95633 263 aa6.71□□□□□ -1.34
VAMP3-201ENST00000054666 RNASE2P10153 161 aaKnown RBP6.71□□□□□ -1.34
VAMP3-201ENST00000054666 IGFBP2P18065 325 aa6.71□□□□□ -1.34
VAMP3-201ENST00000054666 RND2P52198 227 aa6.71□□□□□ -1.34
VAMP3-201ENST00000054666 PRRX1P54821 245 aa6.71□□□□□ -1.34
VAMP3-201ENST00000054666 SNRPEP62304 92 aaKnown RBP6.71□□□□□ -1.34
VAMP3-201ENST00000054666 ST6GALNAC6Q969X2 333 aa6.71□□□□□ -1.34
VAMP3-201ENST00000054666 TIMD4Q96H15 378 aa6.71□□□□□ -1.34
VAMP3-201ENST00000054666 OR5B12Q96R08 314 aa6.71□□□□□ -1.34
VAMP3-201ENST00000054666 NDUFA4L2Q9NRX3 87 aa6.71□□□□□ -1.34
VAMP3-201ENST00000054666 TGIF2-C20orf24A0A0A6YYL0 155 aa6.7□□□□□ -1.34
VAMP3-201ENST00000054666 H7BYZ3 331 aa6.7□□□□□ -1.34
VAMP3-201ENST00000054666 SIAH2O43255 324 aa6.7□□□□□ -1.34
VAMP3-201ENST00000054666 VENTXO95231 258 aa6.7□□□□□ -1.34
VAMP3-201ENST00000054666 IGHV2-70P01814 119 aa6.7□□□□□ -1.34
VAMP3-201ENST00000054666 S100PP25815 95 aa6.7□□□□□ -1.34
VAMP3-201ENST00000054666 SUB1P53999 127 aaKnown RBP eCLIP6.7□□□□□ -1.34
VAMP3-201ENST00000054666 RPL23P62829 140 aaKnown RBP6.7□□□□□ -1.34
VAMP3-201ENST00000054666 HLA-DRB5Q30154 266 aa6.7□□□□□ -1.34
VAMP3-201ENST00000054666 LINC00518Q8N0U6 118 aa6.7□□□□□ -1.34
VAMP3-201ENST00000054666 ABHD5Q8WTS1 349 aa6.7□□□□□ -1.34
VAMP3-201ENST00000054666 AMMECR1Q9Y4X0 333 aaPredicted RBP6.7□□□□□ -1.34
VAMP3-201ENST00000054666 ANKHD1Q8IWZ3 2542 aaKnown RBP6.7□□□□□ -1.34
VAMP3-201ENST00000054666 IGHV2-26A0A0B4J1V2 119 aa6.7□□□□□ -1.34
VAMP3-201ENST00000054666 C5orf52A6NGY3 159 aa6.7□□□□□ -1.34
VAMP3-201ENST00000054666 INS-IGF2F8WCM5 200 aa6.7□□□□□ -1.34
VAMP3-201ENST00000054666 LYNX1G3V0Z9 82 aa6.7□□□□□ -1.34
VAMP3-201ENST00000054666 UBE2CO00762 179 aa6.7□□□□□ -1.34
VAMP3-201ENST00000054666 ENSAO43768 121 aaKnown RBP6.7□□□□□ -1.34
VAMP3-201ENST00000054666 SLC25A17O43808 307 aa6.7□□□□□ -1.34
VAMP3-201ENST00000054666 ACTL6BO94805 426 aa6.7□□□□□ -1.34
VAMP3-201ENST00000054666 RBP4P02753 201 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms