RNA–Protein interactions for RNA: ENST00000641491.1

PHGDH-218, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 986 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-218ENST00000641491 Q8N9W7 124 aa10.32□□□□□ -0.76
PHGDH-218ENST00000641491 OR1L8Q8NGR8 309 aa10.32□□□□□ -0.76
PHGDH-218ENST00000641491 OR5B3Q8NH48 314 aa10.32□□□□□ -0.76
PHGDH-218ENST00000641491 LHFPL5Q8TAF8 219 aa10.32□□□□□ -0.76
PHGDH-218ENST00000641491 RITA1Q96K30 269 aa10.32□□□□□ -0.76
PHGDH-218ENST00000641491 ZNF430Q9H8G1 570 aaPredicted RBP10.32□□□□□ -0.76
PHGDH-218ENST00000641491 PLEKHA3Q9HB20 300 aa10.32□□□□□ -0.76
PHGDH-218ENST00000641491 NSG2Q9Y328 171 aa10.32□□□□□ -0.76
PHGDH-218ENST00000641491 C7orf66A4D0T2 115 aa10.31□□□□□ -0.76
PHGDH-218ENST00000641491 C15orf61A6NNL5 157 aa10.31□□□□□ -0.76
PHGDH-218ENST00000641491 SRRM4A7MD48 611 aaKnown RBP10.31□□□□□ -0.76
PHGDH-218ENST00000641491 AP4M1O00189 453 aa10.31□□□□□ -0.76
PHGDH-218ENST00000641491 CHST1O43916 411 aa10.31□□□□□ -0.76
PHGDH-218ENST00000641491 ADAP1O75689 374 aa10.31□□□□□ -0.76
PHGDH-218ENST00000641491 IGKV1-39P01597 117 aa10.31□□□□□ -0.76
PHGDH-218ENST00000641491 IGKV1-5P01602 117 aa10.31□□□□□ -0.76
PHGDH-218ENST00000641491 IGKV1D-39P04432 117 aa10.31□□□□□ -0.76
PHGDH-218ENST00000641491 PET100P0DJ07 73 aa10.31□□□□□ -0.76
PHGDH-218ENST00000641491 PVALBP20472 110 aaPredicted RBP10.31□□□□□ -0.76
PHGDH-218ENST00000641491 BRWD1-AS2P59051 145 aa10.31□□□□□ -0.76
PHGDH-218ENST00000641491 SLC35B1P78383 322 aa10.31□□□□□ -0.76
PHGDH-218ENST00000641491 OR4F5Q8NH21 305 aa10.31□□□□□ -0.76
PHGDH-218ENST00000641491 GPR146Q96CH1 333 aa10.31□□□□□ -0.76
PHGDH-218ENST00000641491 QTRT1Q9BXR0 403 aaKnown RBP10.31□□□□□ -0.76
PHGDH-218ENST00000641491 HIPK2Q9H2X6 1198 aa10.31□□□□□ -0.76
PHGDH-218ENST00000641491 FOXA2Q9Y261 457 aaPredicted RBP10.31□□□□□ -0.76
PHGDH-218ENST00000641491 hCG_2014768A0A024R1R8 64 aa10.3□□□□□ -0.76
PHGDH-218ENST00000641491 L7N2F9 121 aa10.3□□□□□ -0.76
PHGDH-218ENST00000641491 CCSO14618 274 aa10.3□□□□□ -0.76
PHGDH-218ENST00000641491 OPN1MWP04001 364 aa10.3□□□□□ -0.76
PHGDH-218ENST00000641491 RLN2P04090 185 aa10.3□□□□□ -0.76
PHGDH-218ENST00000641491 TRAPPC2P0DI81 140 aa10.3□□□□□ -0.76
PHGDH-218ENST00000641491 TRAPPC2BP0DI82 140 aa10.3□□□□□ -0.76
PHGDH-218ENST00000641491 OPN1MW2P0DN77 364 aa10.3□□□□□ -0.76
PHGDH-218ENST00000641491 OPN1MW3P0DN78 364 aa10.3□□□□□ -0.76
PHGDH-218ENST00000641491 SLC25A6P12236 298 aa10.3□□□□□ -0.76
PHGDH-218ENST00000641491 DEFA4P12838 97 aa10.3□□□□□ -0.76
PHGDH-218ENST00000641491 COMPP49747 757 aaPredicted RBP10.3□□□□□ -0.76
PHGDH-218ENST00000641491 S100A10P60903 97 aa10.3□□□□□ -0.76
PHGDH-218ENST00000641491 VAMP2P63027 116 aa10.3□□□□□ -0.76
PHGDH-218ENST00000641491 RPP30P78346 268 aaKnown RBP10.3□□□□□ -0.76
PHGDH-218ENST00000641491 ERHP84090 104 aaKnown RBP10.3□□□□□ -0.76
PHGDH-218ENST00000641491 ECSCRQ19T08 205 aa10.3□□□□□ -0.76
PHGDH-218ENST00000641491 ZNF562Q6V9R5 426 aa10.3□□□□□ -0.76
PHGDH-218ENST00000641491 HSD17B13Q7Z5P4 300 aaPredicted RBP10.3□□□□□ -0.76
PHGDH-218ENST00000641491 CADM3Q8N126 398 aa10.3□□□□□ -0.76
PHGDH-218ENST00000641491 ESM1Q9NQ30 184 aa10.3□□□□□ -0.76
PHGDH-218ENST00000641491 TPSG1Q9NRR2 321 aa10.3□□□□□ -0.76
PHGDH-218ENST00000641491 COA4Q9NYJ1 87 aa10.3□□□□□ -0.76
PHGDH-218ENST00000641491 SH2D7A6NKC9 451 aaPredicted RBP10.29□□□□□ -0.76
PHGDH-218ENST00000641491 NXPH3O95157 252 aa10.29□□□□□ -0.76
PHGDH-218ENST00000641491 LY86O95711 162 aa10.29□□□□□ -0.76
PHGDH-218ENST00000641491 OR9G9P0C7N8 305 aa10.29□□□□□ -0.76
PHGDH-218ENST00000641491 SNCAP37840 140 aa10.29□□□□□ -0.76
PHGDH-218ENST00000641491 NKX2-1P43699 371 aaPredicted RBP10.29□□□□□ -0.76
PHGDH-218ENST00000641491 SUB1P53999 127 aaKnown RBP eCLIP10.29□□□□□ -0.76
PHGDH-218ENST00000641491 SPCS3P61009 180 aa10.29□□□□□ -0.76
PHGDH-218ENST00000641491 RRAS2P62070 204 aaPredicted RBP10.29□□□□□ -0.76
PHGDH-218ENST00000641491 CX3CL1P78423 397 aa10.29□□□□□ -0.76
PHGDH-218ENST00000641491 NMSQ5H8A3 153 aa10.29□□□□□ -0.76
PHGDH-218ENST00000641491 OR5M8Q8NGP6 311 aa10.29□□□□□ -0.76
PHGDH-218ENST00000641491 SRSF12Q8WXF0 261 aaKnown RBP10.29□□□□□ -0.76
PHGDH-218ENST00000641491 TMEM158Q8WZ71 300 aa10.29□□□□□ -0.76
PHGDH-218ENST00000641491 RBMXL1Q96E39 390 aaKnown RBP10.29□□□□□ -0.76
PHGDH-218ENST00000641491 C2orf50Q96LR7 162 aa10.29□□□□□ -0.76
PHGDH-218ENST00000641491 TMEM68Q96MH6 324 aa10.29□□□□□ -0.76
PHGDH-218ENST00000641491 CIB3Q96Q77 187 aaPredicted RBP10.29□□□□□ -0.76
PHGDH-218ENST00000641491 PLSCR3Q9NRY6 295 aa10.29□□□□□ -0.76
PHGDH-218ENST00000641491 ZNF355PQ9NSJ1 428 aa10.29□□□□□ -0.76
PHGDH-218ENST00000641491 ZNF257Q9Y2Q1 563 aa10.29□□□□□ -0.76
PHGDH-218ENST00000641491 FAM90A26D6RGX4 464 aa10.28□□□□□ -0.76
PHGDH-218ENST00000641491 ST8SIA3O43173 380 aa10.28□□□□□ -0.76
PHGDH-218ENST00000641491 HSPE1P61604 102 aaKnown RBP10.28□□□□□ -0.76
PHGDH-218ENST00000641491 BLCAPP62952 87 aa10.28□□□□□ -0.76
PHGDH-218ENST00000641491 RELBQ01201 579 aa10.28□□□□□ -0.76
PHGDH-218ENST00000641491 IZUMO4Q1ZYL8 232 aa10.28□□□□□ -0.76
PHGDH-218ENST00000641491 UNQ5815/PRO19632Q6UWF5 114 aa10.28□□□□□ -0.76
PHGDH-218ENST00000641491 NOXA1Q86UR1 476 aa10.28□□□□□ -0.76
PHGDH-218ENST00000641491 ZNF429Q86V71 674 aa10.28□□□□□ -0.76
PHGDH-218ENST00000641491 ZBTB8BQ8NAP8 495 aaPredicted RBP10.28□□□□□ -0.76
PHGDH-218ENST00000641491 ASB13Q8WXK3 278 aa10.28□□□□□ -0.76
PHGDH-218ENST00000641491 HEYLQ9NQ87 328 aaPredicted RBP10.28□□□□□ -0.76
PHGDH-218ENST00000641491 TMEM14BQ9NUH8 114 aa10.28□□□□□ -0.76
PHGDH-218ENST00000641491 PAIP2BQ9ULR5 123 aaKnown RBP10.28□□□□□ -0.76
PHGDH-218ENST00000641491 SVEP1Q4LDE5 3571 aa10.28□□□□□ -0.76
PHGDH-218ENST00000641491 IGHV7-81A0A0B4J1V7 117 aa10.27□□□□□ -0.77
PHGDH-218ENST00000641491 TRAV3A0A0B4J244 114 aa10.27□□□□□ -0.77
PHGDH-218ENST00000641491 MSGN1A6NI15 193 aa10.27□□□□□ -0.77
PHGDH-218ENST00000641491 DBX1A6NMT0 343 aa10.27□□□□□ -0.77
PHGDH-218ENST00000641491 ATP6V0E1O15342 81 aa10.27□□□□□ -0.77
PHGDH-218ENST00000641491 CRYGBP07316 175 aa10.27□□□□□ -0.77
PHGDH-218ENST00000641491 PRCDQ00LT1 54 aa10.27□□□□□ -0.77
PHGDH-218ENST00000641491 FGL1Q08830 312 aa10.27□□□□□ -0.77
PHGDH-218ENST00000641491 PJVKQ0ZLH3 352 aa10.27□□□□□ -0.77
PHGDH-218ENST00000641491 TMEM65Q6PI78 240 aa10.27□□□□□ -0.77
PHGDH-218ENST00000641491 CENPVQ7Z7K6 275 aaPredicted RBP10.27□□□□□ -0.77
PHGDH-218ENST00000641491 OR52E5Q8NH55 327 aa10.27□□□□□ -0.77
PHGDH-218ENST00000641491 HSPB9Q9BQS6 159 aa10.27□□□□□ -0.77
PHGDH-218ENST00000641491 SRSF8Q9BRL6 282 aaKnown RBP10.27□□□□□ -0.77
PHGDH-218ENST00000641491 LSM5Q9Y4Y9 91 aaKnown RBP10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms