RNA–Protein interactions for RNA: ENST00000640872.1

PAX6-280, Transcript of paired box 6, humanhuman

TSL 1 (best)

Gene PAX6, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-280ENST00000640872 RFESDQ8TAC1 157 aa11.33□□□□□ -0.6
PAX6-280ENST00000640872 GNB1LQ9BYB4 327 aa11.33□□□□□ -0.6
PAX6-280ENST00000640872 GNB4Q9HAV0 340 aa11.33□□□□□ -0.6
PAX6-280ENST00000640872 SEPSECSQ9HD40 501 aaKnown RBP11.33□□□□□ -0.6
PAX6-280ENST00000640872 HEYLQ9NQ87 328 aaPredicted RBP11.33□□□□□ -0.6
PAX6-280ENST00000640872 METRNQ9UJH8 293 aa11.33□□□□□ -0.6
PAX6-280ENST00000640872 FCGR3BO75015 233 aa11.33□□□□□ -0.6
PAX6-280ENST00000640872 GPX1P07203 203 aa11.33□□□□□ -0.6
PAX6-280ENST00000640872 SP1P08047 785 aa11.33□□□□□ -0.6
PAX6-280ENST00000640872 CTRLP40313 264 aa11.33□□□□□ -0.6
PAX6-280ENST00000640872 EFNB3Q15768 340 aa11.33□□□□□ -0.6
PAX6-280ENST00000640872 ST6GALNAC3Q8NDV1 305 aa11.33□□□□□ -0.6
PAX6-280ENST00000640872 OR4A16Q8NH70 328 aa11.33□□□□□ -0.6
PAX6-280ENST00000640872 SSMEM1Q8WWF3 244 aa11.33□□□□□ -0.6
PAX6-280ENST00000640872 C15orf65H3BRN8 121 aa11.32□□□□□ -0.6
PAX6-280ENST00000640872 COL8A2P25067 703 aa11.32□□□□□ -0.6
PAX6-280ENST00000640872 PLGLB1Q02325 96 aa11.32□□□□□ -0.6
PAX6-280ENST00000640872 MRPL49Q13405 166 aaKnown RBP11.32□□□□□ -0.6
PAX6-280ENST00000640872 BATFQ16520 125 aa11.32□□□□□ -0.6
PAX6-280ENST00000640872 ABHD17BQ5VST6 288 aa11.32□□□□□ -0.6
PAX6-280ENST00000640872 SIGLECL1Q8N7X8 197 aa11.32□□□□□ -0.6
PAX6-280ENST00000640872 RNF2Q99496 336 aa11.32□□□□□ -0.6
PAX6-280ENST00000640872 DNAJC13O75165 2243 aa11.32□□□□□ -0.6
PAX6-280ENST00000640872 HCFC1P51610 2035 aa11.32□□□□□ -0.6
PAX6-280ENST00000640872 SAA2-SAA4A0A096LPE2 208 aa11.32□□□□□ -0.6
PAX6-280ENST00000640872 FOXH1O75593 365 aa11.32□□□□□ -0.6
PAX6-280ENST00000640872 TNFSF15O95150 251 aa11.32□□□□□ -0.6
PAX6-280ENST00000640872 AREGP15514 252 aa11.32□□□□□ -0.6
PAX6-280ENST00000640872 MPV17P39210 176 aa11.32□□□□□ -0.6
PAX6-280ENST00000640872 RHOBP62745 196 aa11.32□□□□□ -0.6
PAX6-280ENST00000640872 HTD2P86397 168 aa11.32□□□□□ -0.6
PAX6-280ENST00000640872 RELBQ01201 579 aa11.32□□□□□ -0.6
PAX6-280ENST00000640872 OR8I2Q8N0Y5 310 aa11.32□□□□□ -0.6
PAX6-280ENST00000640872 ABHD12Q8N2K0 398 aa11.32□□□□□ -0.6
PAX6-280ENST00000640872 UHRF2Q96PU4 802 aa11.32□□□□□ -0.6
PAX6-280ENST00000640872 NPVFQ9HCQ7 196 aa11.32□□□□□ -0.6
PAX6-280ENST00000640872 ZNF586Q9NXT0 402 aa11.32□□□□□ -0.6
PAX6-280ENST00000640872 TET2Q6N021 2002 aaPredicted RBP11.31□□□□□ -0.6
PAX6-280ENST00000640872 OR10J4P0C629 311 aa11.31□□□□□ -0.6
PAX6-280ENST00000640872 SP9P0CG40 484 aa11.31□□□□□ -0.6
PAX6-280ENST00000640872 GPR12P47775 334 aa11.31□□□□□ -0.6
PAX6-280ENST00000640872 OR5I1Q13606 314 aa11.31□□□□□ -0.6
PAX6-280ENST00000640872 COL5A1-AS1Q5SY13 56 aa11.31□□□□□ -0.6
PAX6-280ENST00000640872 STPG3Q8N7X2 389 aa11.31□□□□□ -0.6
PAX6-280ENST00000640872 DCTN5Q9BTE1 182 aa11.31□□□□□ -0.6
PAX6-280ENST00000640872 OBP2BQ9NPH6 170 aa11.31□□□□□ -0.6
PAX6-280ENST00000640872 FOXJ2Q9P0K8 574 aa11.31□□□□□ -0.6
PAX6-280ENST00000640872 CACNA1DQ01668 2161 aa11.31□□□□□ -0.6
PAX6-280ENST00000640872 TRAV3A0A0B4J244 114 aa11.31□□□□□ -0.6
PAX6-280ENST00000640872 C9orf172C9J069 976 aa11.31□□□□□ -0.6
PAX6-280ENST00000640872 DIRC3C9JPN6 131 aa11.31□□□□□ -0.6
PAX6-280ENST00000640872 ADH4P08319 380 aa11.31□□□□□ -0.6
PAX6-280ENST00000640872 KRTDAPP60985 99 aa11.31□□□□□ -0.6
PAX6-280ENST00000640872 C1orf174Q8IYL3 243 aa11.31□□□□□ -0.6
PAX6-280ENST00000640872 VKORC1L1Q8N0U8 176 aa11.31□□□□□ -0.6
PAX6-280ENST00000640872 FAM103A1Q9BTL3 118 aaKnown RBP11.31□□□□□ -0.6
PAX6-280ENST00000640872 TBL2Q9Y4P3 447 aaKnown RBP11.31□□□□□ -0.6
PAX6-280ENST00000640872 MED13Q9UHV7 2174 aa11.3□□□□□ -0.6
PAX6-280ENST00000640872 TRGV8A0A0C4DH27 118 aa11.3□□□□□ -0.6
PAX6-280ENST00000640872 M0R296 226 aa11.3□□□□□ -0.6
PAX6-280ENST00000640872 SPINT2O43291 252 aa11.3□□□□□ -0.6
PAX6-280ENST00000640872 MT-CO2P00403 227 aa11.3□□□□□ -0.6
PAX6-280ENST00000640872 MT-ND6P03923 174 aa11.3□□□□□ -0.6
PAX6-280ENST00000640872 TFPI2P48307 235 aa11.3□□□□□ -0.6
PAX6-280ENST00000640872 CX3CL1P78423 397 aa11.3□□□□□ -0.6
PAX6-280ENST00000640872 OR10J3Q5JRS4 329 aa11.3□□□□□ -0.6
PAX6-280ENST00000640872 WDR82Q6UXN9 313 aa11.3□□□□□ -0.6
PAX6-280ENST00000640872 TMEM136Q6ZRR5 245 aa11.3□□□□□ -0.6
PAX6-280ENST00000640872 KLF14Q8TD94 323 aaPredicted RBP11.3□□□□□ -0.6
PAX6-280ENST00000640872 OPN3Q9H1Y3 402 aaPredicted RBP11.3□□□□□ -0.6
PAX6-280ENST00000640872 MSL2Q9HCI7 577 aa11.3□□□□□ -0.6
PAX6-280ENST00000640872 NRN1Q9NPD7 142 aa11.3□□□□□ -0.6
PAX6-280ENST00000640872 SLC45A2Q9UMX9 530 aa11.3□□□□□ -0.6
PAX6-280ENST00000640872 ZFP30Q9Y2G7 519 aa11.3□□□□□ -0.6
PAX6-280ENST00000640872 CBY1Q9Y3M2 126 aa11.3□□□□□ -0.6
PAX6-280ENST00000640872 MMP23AO75900 390 aa11.3□□□□□ -0.6
PAX6-280ENST00000640872 CENPWQ5EE01 88 aa11.3□□□□□ -0.6
PAX6-280ENST00000640872 WDR73Q6P4I2 378 aa11.3□□□□□ -0.6
PAX6-280ENST00000640872 KCNS1Q96KK3 526 aa11.3□□□□□ -0.6
PAX6-280ENST00000640872 TCF19Q9Y242 345 aa11.3□□□□□ -0.6
PAX6-280ENST00000640872 ARL2-SNX15V9GYD0 113 aa11.3□□□□□ -0.6
PAX6-280ENST00000640872 CGAP01215 116 aa11.29□□□□□ -0.6
PAX6-280ENST00000640872 RAB7AP51149 207 aa11.29□□□□□ -0.6
PAX6-280ENST00000640872 PRR20EP86478 221 aa11.29□□□□□ -0.6
PAX6-280ENST00000640872 PRR20CP86479 221 aa11.29□□□□□ -0.6
PAX6-280ENST00000640872 PRR20DP86480 221 aa11.29□□□□□ -0.6
PAX6-280ENST00000640872 PRR20BP86481 221 aa11.29□□□□□ -0.6
PAX6-280ENST00000640872 PRR20AP86496 221 aa11.29□□□□□ -0.6
PAX6-280ENST00000640872 LTC4SQ16873 150 aa11.29□□□□□ -0.6
PAX6-280ENST00000640872 TRAT1Q6PIZ9 186 aa11.29□□□□□ -0.6
PAX6-280ENST00000640872 TEPPQ6URK8 271 aa11.29□□□□□ -0.6
PAX6-280ENST00000640872 FAM90A1Q86YD7 464 aa11.29□□□□□ -0.6
PAX6-280ENST00000640872 OR4P4Q8NGL7 312 aa11.29□□□□□ -0.6
PAX6-280ENST00000640872 RCHY1Q96PM5 261 aa11.29□□□□□ -0.6
PAX6-280ENST00000640872 CXXC4Q9H2H0 198 aa11.29□□□□□ -0.6
PAX6-280ENST00000640872 TMEM140Q9NV12 185 aa11.29□□□□□ -0.6
PAX6-280ENST00000640872 NAT8BQ9UHF3 227 aa11.29□□□□□ -0.6
PAX6-280ENST00000640872 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.28□□□□□ -0.6
PAX6-280ENST00000640872 A0A1W2PS18 150 aa11.28□□□□□ -0.6
PAX6-280ENST00000640872 M0R1X1 148 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms