RNA–Protein interactions for RNA: ENST00000640652.1

SCN3A-210, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5

Gene SCN3A, Length 8,825 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-210ENST00000640652 FAM103A1Q9BTL3 118 aaKnown RBP4.67□□□□□ -1.66
SCN3A-210ENST00000640652 USP9XQ93008 2570 aaPredicted RBP4.67□□□□□ -1.66
SCN3A-210ENST00000640652 C3orf80F5H4A9 247 aa4.67□□□□□ -1.66
SCN3A-210ENST00000640652 IGKV1-5P01602 117 aa4.67□□□□□ -1.66
SCN3A-210ENST00000640652 IER3P46695 156 aa4.67□□□□□ -1.66
SCN3A-210ENST00000640652 CEBPDP49716 269 aaPredicted RBP4.67□□□□□ -1.66
SCN3A-210ENST00000640652 RBPJQ06330 500 aa4.67□□□□□ -1.66
SCN3A-210ENST00000640652 C3AR1Q16581 482 aa4.67□□□□□ -1.66
SCN3A-210ENST00000640652 CLCF1Q9UBD9 225 aa4.67□□□□□ -1.66
SCN3A-210ENST00000640652 SS18L1O75177 396 aaPredicted RBP4.67□□□□□ -1.66
SCN3A-210ENST00000640652 HSBP1O75506 76 aa4.67□□□□□ -1.66
SCN3A-210ENST00000640652 APCSP02743 223 aa4.67□□□□□ -1.66
SCN3A-210ENST00000640652 OR4A8P0C604 315 aa4.67□□□□□ -1.66
SCN3A-210ENST00000640652 RPL29P47914 159 aaKnown RBP4.67□□□□□ -1.66
SCN3A-210ENST00000640652 SPSB3Q6PJ21 355 aa4.67□□□□□ -1.66
SCN3A-210ENST00000640652 RPP25LQ8N5L8 163 aaKnown RBP4.67□□□□□ -1.66
SCN3A-210ENST00000640652 OR1L8Q8NGR8 309 aa4.67□□□□□ -1.66
SCN3A-210ENST00000640652 OR5B3Q8NH48 314 aa4.67□□□□□ -1.66
SCN3A-210ENST00000640652 NDUFAF3Q9BU61 184 aa4.67□□□□□ -1.66
SCN3A-210ENST00000640652 PROK2Q9HC23 129 aa4.67□□□□□ -1.66
SCN3A-210ENST00000640652 CELA3AP09093 270 aa4.67□□□□□ -1.66
SCN3A-210ENST00000640652 PMCHP20382 165 aa4.67□□□□□ -1.66
SCN3A-210ENST00000640652 NUBP1P53384 320 aa4.67□□□□□ -1.66
SCN3A-210ENST00000640652 RPS16P62249 146 aaKnown RBP4.67□□□□□ -1.66
SCN3A-210ENST00000640652 RPL8P62917 257 aaKnown RBP4.67□□□□□ -1.66
SCN3A-210ENST00000640652 RSPO4Q2I0M5 234 aaPredicted RBP4.67□□□□□ -1.66
SCN3A-210ENST00000640652 HLA-DRB5Q30154 266 aa4.67□□□□□ -1.66
SCN3A-210ENST00000640652 C10orf113Q5VZT2 155 aa4.67□□□□□ -1.66
SCN3A-210ENST00000640652 MIC13Q5XKP0 118 aa4.67□□□□□ -1.66
SCN3A-210ENST00000640652 STUMQ69YW2 141 aa4.67□□□□□ -1.66
SCN3A-210ENST00000640652 Q6P435 159 aa4.67□□□□□ -1.66
SCN3A-210ENST00000640652 DEFB123Q8N688 67 aa4.67□□□□□ -1.66
SCN3A-210ENST00000640652 HARBI1Q96MB7 349 aa4.67□□□□□ -1.66
SCN3A-210ENST00000640652 MBNL3Q9NUK0 354 aaKnown RBP4.67□□□□□ -1.66
SCN3A-210ENST00000640652 CALYQ9NYX4 217 aa4.67□□□□□ -1.66
SCN3A-210ENST00000640652 HIVEP2P31629 2446 aa4.67□□□□□ -1.66
SCN3A-210ENST00000640652 TRAV39A0A0B4J263 110 aa4.67□□□□□ -1.66
SCN3A-210ENST00000640652 SNURFLB1AK76 121 aa4.67□□□□□ -1.66
SCN3A-210ENST00000640652 TMPRSS2O15393 492 aa4.67□□□□□ -1.66
SCN3A-210ENST00000640652 YPEL1O60688 119 aa4.67□□□□□ -1.66
SCN3A-210ENST00000640652 NTF3P20783 257 aa4.67□□□□□ -1.66
SCN3A-210ENST00000640652 G0S2P27469 103 aa4.67□□□□□ -1.66
SCN3A-210ENST00000640652 Q0VFX4 171 aa4.67□□□□□ -1.66
SCN3A-210ENST00000640652 MBNL2Q5VZF2 373 aaKnown RBP4.67□□□□□ -1.66
SCN3A-210ENST00000640652 WDR82Q6UXN9 313 aa4.67□□□□□ -1.66
SCN3A-210ENST00000640652 FGFBP3Q8TAT2 258 aa4.67□□□□□ -1.66
SCN3A-210ENST00000640652 PRR7Q8TB68 274 aa4.67□□□□□ -1.66
SCN3A-210ENST00000640652 ZDHHC16Q969W1 377 aa4.67□□□□□ -1.66
SCN3A-210ENST00000640652 YPEL2Q96QA6 119 aa4.67□□□□□ -1.66
SCN3A-210ENST00000640652 HES7Q9BYE0 225 aa4.67□□□□□ -1.66
SCN3A-210ENST00000640652 ZNF581Q9P0T4 197 aa4.67□□□□□ -1.66
SCN3A-210ENST00000640652 TCF19Q9Y242 345 aa4.67□□□□□ -1.66
SCN3A-210ENST00000640652 CBY1Q9Y3M2 126 aa4.67□□□□□ -1.66
SCN3A-210ENST00000640652 PYY3Q5JQD4 70 aa4.67□□□□□ -1.66
SCN3A-210ENST00000640652 GFI1BQ5VTD9 330 aa4.67□□□□□ -1.66
SCN3A-210ENST00000640652 ZNF600Q6ZNG1 722 aa4.67□□□□□ -1.66
SCN3A-210ENST00000640652 MOGAT3Q86VF5 341 aa4.67□□□□□ -1.66
SCN3A-210ENST00000640652 KCNS1Q96KK3 526 aa4.67□□□□□ -1.66
SCN3A-210ENST00000640652 RBM14Q96PK6 669 aaKnown RBP4.67□□□□□ -1.66
SCN3A-210ENST00000640652 MRPL18Q9H0U6 180 aaKnown RBP4.67□□□□□ -1.66
SCN3A-210ENST00000640652 IGKV1-6A0A0C4DH72 117 aa4.67□□□□□ -1.66
SCN3A-210ENST00000640652 C9JCJ5 164 aa4.67□□□□□ -1.66
SCN3A-210ENST00000640652 DIRC3C9JPN6 131 aa4.67□□□□□ -1.66
SCN3A-210ENST00000640652 SPRY3O43610 288 aa4.67□□□□□ -1.66
SCN3A-210ENST00000640652 CELA3BP08861 270 aa4.67□□□□□ -1.66
SCN3A-210ENST00000640652 TIMP3P35625 211 aa4.67□□□□□ -1.66
SCN3A-210ENST00000640652 TNFSF10P50591 281 aa4.67□□□□□ -1.66
SCN3A-210ENST00000640652 TRIP6Q15654 476 aaKnown RBP4.67□□□□□ -1.66
SCN3A-210ENST00000640652 IBA57Q5T440 356 aaKnown RBP4.67□□□□□ -1.66
SCN3A-210ENST00000640652 OR4C13Q8NGP0 309 aa4.67□□□□□ -1.66
SCN3A-210ENST00000640652 ABHD5Q8WTS1 349 aa4.67□□□□□ -1.66
SCN3A-210ENST00000640652 UQCR10Q9UDW1 63 aa4.67□□□□□ -1.66
SCN3A-210ENST00000640652 FAM90A2PQ658T7 463 aa4.66□□□□□ -1.66
SCN3A-210ENST00000640652 ACSM6Q6P461 480 aa4.66□□□□□ -1.66
SCN3A-210ENST00000640652 WDYHV1Q96HA8 205 aa4.66□□□□□ -1.66
SCN3A-210ENST00000640652 GNB1LQ9BYB4 327 aa4.66□□□□□ -1.66
SCN3A-210ENST00000640652 PAM16Q9Y3D7 125 aa4.66□□□□□ -1.66
SCN3A-210ENST00000640652 C17orf98A8MV24 154 aa4.66□□□□□ -1.66
SCN3A-210ENST00000640652 MKRN2OSH3BPM6 223 aa4.66□□□□□ -1.66
SCN3A-210ENST00000640652 DUTP33316 252 aaKnown RBP4.66□□□□□ -1.66
SCN3A-210ENST00000640652 CSN1S1P47710 185 aa4.66□□□□□ -1.66
SCN3A-210ENST00000640652 RNF7Q9UBF6 113 aa4.66□□□□□ -1.66
SCN3A-210ENST00000640652 TRGV8A0A0C4DH27 118 aa4.66□□□□□ -1.66
SCN3A-210ENST00000640652 RTP5Q14D33 572 aa4.66□□□□□ -1.66
SCN3A-210ENST00000640652 COL5A1-AS1Q5SY13 56 aa4.66□□□□□ -1.66
SCN3A-210ENST00000640652 Q6ZN92 141 aa4.66□□□□□ -1.66
SCN3A-210ENST00000640652 TMPRSS7Q7RTY8 843 aa4.66□□□□□ -1.66
SCN3A-210ENST00000640652 PLPPR1Q8TBJ4 325 aa4.66□□□□□ -1.66
SCN3A-210ENST00000640652 FLYWCH2Q96CP2 140 aaKnown RBP4.66□□□□□ -1.66
SCN3A-210ENST00000640652 TBX15Q96SF7 602 aa4.66□□□□□ -1.66
SCN3A-210ENST00000640652 AURKAIP1Q9NWT8 199 aaPredicted RBP4.66□□□□□ -1.66
SCN3A-210ENST00000640652 FOXJ2Q9P0K8 574 aa4.66□□□□□ -1.66
SCN3A-210ENST00000640652 HSPE1P61604 102 aaKnown RBP4.66□□□□□ -1.66
SCN3A-210ENST00000640652 MMD2Q8IY49 270 aa4.66□□□□□ -1.66
SCN3A-210ENST00000640652 VKORC1L1Q8N0U8 176 aa4.66□□□□□ -1.66
SCN3A-210ENST00000640652 FOXA2Q9Y261 457 aaPredicted RBP4.66□□□□□ -1.66
SCN3A-210ENST00000640652 C2CD3Q4AC94 2353 aa4.66□□□□□ -1.66
SCN3A-210ENST00000640652 FNDC10F2Z333 226 aa4.66□□□□□ -1.66
SCN3A-210ENST00000640652 ENSAO43768 121 aaKnown RBP4.66□□□□□ -1.66
SCN3A-210ENST00000640652 OR10J4P0C629 311 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms