RNA–Protein interactions for RNA: ENST00000640072.1

NECAP1-222, Transcript of NECAP endocytosis associated 1, human

TSL 5

Gene NECAP1, Length 3,456 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NECAP1-222	ENST00000640072	ANKRD31	Q8N7Z5	1873 aa		5.15	□□□□□ -1.58
NECAP1-222	ENST00000640072	TNS1	Q9HBL0	1735 aa	Known RBP	5.15	□□□□□ -1.58
NECAP1-222	ENST00000640072	TICRR	Q7Z2Z1	1910 aa		5.15	□□□□□ -1.58
NECAP1-222	ENST00000640072	SMIM28	A0A1B0GU29	152 aa		5.15	□□□□□ -1.58
NECAP1-222	ENST00000640072	SLC17A2	O00624	439 aa		5.15	□□□□□ -1.58
NECAP1-222	ENST00000640072	ZNF324	O75467	553 aa	Predicted RBP	5.15	□□□□□ -1.58
NECAP1-222	ENST00000640072	RPS28	P62857	69 aa	Known RBP	5.15	□□□□□ -1.58
NECAP1-222	ENST00000640072	CD164	Q04900	197 aa		5.15	□□□□□ -1.58
NECAP1-222	ENST00000640072	SHISA6	Q6ZSJ9	500 aa		5.15	□□□□□ -1.58
NECAP1-222	ENST00000640072	FAM19A1	Q7Z5A9	133 aa		5.15	□□□□□ -1.58
NECAP1-222	ENST00000640072	MRPL55	Q7Z7F7	128 aa	Known RBP	5.15	□□□□□ -1.58
NECAP1-222	ENST00000640072	RND1	Q92730	232 aa		5.15	□□□□□ -1.58
NECAP1-222	ENST00000640072	SDF2	Q99470	211 aa		5.15	□□□□□ -1.58
NECAP1-222	ENST00000640072	VN1R3	Q9BXE9	311 aa		5.15	□□□□□ -1.58
NECAP1-222	ENST00000640072	CLEC7A	Q9BXN2	247 aa		5.15	□□□□□ -1.58
NECAP1-222	ENST00000640072	TMEM30A	Q9NV96	361 aa		5.15	□□□□□ -1.58
NECAP1-222	ENST00000640072	TAAR3P	Q9P1P4	343 aa		5.15	□□□□□ -1.58
NECAP1-222	ENST00000640072	MEGF6	O75095	1541 aa		5.15	□□□□□ -1.58
NECAP1-222	ENST00000640072	SPTB	P11277	2137 aa		5.15	□□□□□ -1.59
NECAP1-222	ENST00000640072	RER1	O15258	196 aa		5.15	□□□□□ -1.59
NECAP1-222	ENST00000640072	ZNF737	O75373	536 aa		5.15	□□□□□ -1.59
NECAP1-222	ENST00000640072	MT-ND6	P03923	174 aa		5.15	□□□□□ -1.59
NECAP1-222	ENST00000640072	NHLRC4	P0CG21	123 aa	Predicted RBP	5.15	□□□□□ -1.59
NECAP1-222	ENST00000640072	NOV	P48745	357 aa		5.15	□□□□□ -1.59
NECAP1-222	ENST00000640072	CLDN2	P57739	230 aa		5.15	□□□□□ -1.59
NECAP1-222	ENST00000640072	PFN3	P60673	137 aa		5.15	□□□□□ -1.59
NECAP1-222	ENST00000640072	UBE2G1	P62253	170 aa		5.15	□□□□□ -1.59
NECAP1-222	ENST00000640072	MRPS6	P82932	125 aa	Known RBP	5.15	□□□□□ -1.59
NECAP1-222	ENST00000640072		Q6ZUT4	128 aa		5.15	□□□□□ -1.59
NECAP1-222	ENST00000640072	PIANP	Q8IYJ0	282 aa		5.15	□□□□□ -1.59
NECAP1-222	ENST00000640072	OR51E1	Q8TCB6	317 aa		5.15	□□□□□ -1.59
NECAP1-222	ENST00000640072	MRPL30	Q8TCC3	161 aa	Known RBP	5.15	□□□□□ -1.59
NECAP1-222	ENST00000640072	RNF128	Q8TEB7	428 aa		5.15	□□□□□ -1.59
NECAP1-222	ENST00000640072	CLDN23	Q96B33	292 aa		5.15	□□□□□ -1.59
NECAP1-222	ENST00000640072	NUS1	Q96E22	293 aa		5.15	□□□□□ -1.59
NECAP1-222	ENST00000640072	KCNS1	Q96KK3	526 aa		5.15	□□□□□ -1.59
NECAP1-222	ENST00000640072	TMEM191A	Q9H0A3	160 aa		5.15	□□□□□ -1.59
NECAP1-222	ENST00000640072	FZR1	Q9UM11	496 aa		5.15	□□□□□ -1.59
NECAP1-222	ENST00000640072	ZBTB32	Q9Y2Y4	487 aa	Predicted RBP	5.15	□□□□□ -1.59
NECAP1-222	ENST00000640072	HEBP2	Q9Y5Z4	205 aa		5.15	□□□□□ -1.59
NECAP1-222	ENST00000640072	ABCA7	Q8IZY2	2146 aa		5.14	□□□□□ -1.59
NECAP1-222	ENST00000640072	FOCAD	Q5VW36	1801 aa		5.14	□□□□□ -1.59
NECAP1-222	ENST00000640072	ZNF732	B4DXR9	585 aa		5.14	□□□□□ -1.59
NECAP1-222	ENST00000640072		J3QRE1	110 aa		5.14	□□□□□ -1.59
NECAP1-222	ENST00000640072	BMPR1B	O00238	502 aa		5.14	□□□□□ -1.59
NECAP1-222	ENST00000640072	FGF10	O15520	208 aa	Predicted RBP	5.14	□□□□□ -1.59
NECAP1-222	ENST00000640072	STC2	O76061	302 aa		5.14	□□□□□ -1.59
NECAP1-222	ENST00000640072	NUDT14	O95848	222 aa		5.14	□□□□□ -1.59
NECAP1-222	ENST00000640072	MEOX1	P50221	254 aa		5.14	□□□□□ -1.59
NECAP1-222	ENST00000640072	SLC38A11	Q08AI6	406 aa		5.14	□□□□□ -1.59
NECAP1-222	ENST00000640072	KLRB1	Q12918	225 aa		5.14	□□□□□ -1.59
NECAP1-222	ENST00000640072	ZNF146	Q15072	292 aa		5.14	□□□□□ -1.59
NECAP1-222	ENST00000640072	ABCA11P	Q4W5N1	156 aa		5.14	□□□□□ -1.59
NECAP1-222	ENST00000640072	ZNF324B	Q6AW86	544 aa	Predicted RBP	5.14	□□□□□ -1.59
NECAP1-222	ENST00000640072	HOGA1	Q86XE5	327 aa		5.14	□□□□□ -1.59
NECAP1-222	ENST00000640072	LINC01561	Q8N1V8	128 aa		5.14	□□□□□ -1.59
NECAP1-222	ENST00000640072	STPG3	Q8N7X2	389 aa		5.14	□□□□□ -1.59
NECAP1-222	ENST00000640072	OR13H1	Q8NG92	308 aa		5.14	□□□□□ -1.59
NECAP1-222	ENST00000640072	CACNA1D	Q01668	2161 aa		5.14	□□□□□ -1.59
NECAP1-222	ENST00000640072	IGKV6D-41	A0A0C4DH26	115 aa		5.14	□□□□□ -1.59
NECAP1-222	ENST00000640072		A0A1B0GWB2	263 aa		5.14	□□□□□ -1.59
NECAP1-222	ENST00000640072	TMEM150C	B9EJG8	249 aa		5.14	□□□□□ -1.59
NECAP1-222	ENST00000640072		P01737	135 aa		5.14	□□□□□ -1.59
NECAP1-222	ENST00000640072	IGHG4	P01861	327 aa		5.14	□□□□□ -1.59
NECAP1-222	ENST00000640072	HERV-K104	P61576	105 aa		5.14	□□□□□ -1.59
NECAP1-222	ENST00000640072	EXOC3-AS1	Q8N2X6	119 aa		5.14	□□□□□ -1.59
NECAP1-222	ENST00000640072	MRPL24	Q96A35	216 aa	Known RBP	5.14	□□□□□ -1.59
NECAP1-222	ENST00000640072	WFDC6	Q9BQY6	131 aa		5.14	□□□□□ -1.59
NECAP1-222	ENST00000640072	CES1P1	Q9UKY3	287 aa		5.14	□□□□□ -1.59
NECAP1-222	ENST00000640072	MCTS1	Q9ULC4	181 aa	Known RBP	5.14	□□□□□ -1.59
NECAP1-222	ENST00000640072	LSM4	Q9Y4Z0	139 aa	Known RBP	5.14	□□□□□ -1.59
NECAP1-222	ENST00000640072	NRXN2	Q9P2S2	1712 aa		5.14	□□□□□ -1.59
NECAP1-222	ENST00000640072	MCM3AP	O60318	1980 aa		5.14	□□□□□ -1.59
NECAP1-222	ENST00000640072	ARFGEF1	Q9Y6D6	1849 aa		5.14	□□□□□ -1.59
NECAP1-222	ENST00000640072		A0A1W2PPM0	123 aa		5.14	□□□□□ -1.59
NECAP1-222	ENST00000640072	SPINT2	O43291	252 aa		5.14	□□□□□ -1.59
NECAP1-222	ENST00000640072	CST7	O76096	145 aa		5.14	□□□□□ -1.59
NECAP1-222	ENST00000640072	LINC00869	P0C866	280 aa		5.14	□□□□□ -1.59
NECAP1-222	ENST00000640072	SPEM2	Q0P670	501 aa		5.14	□□□□□ -1.59
NECAP1-222	ENST00000640072	KIR3DS1	Q14943	382 aa		5.14	□□□□□ -1.59
NECAP1-222	ENST00000640072	SAMD5	Q5TGI4	173 aa		5.14	□□□□□ -1.59
NECAP1-222	ENST00000640072	RFLNB	Q8N5W9	214 aa		5.14	□□□□□ -1.59
NECAP1-222	ENST00000640072	GATD1	Q8NB37	220 aa		5.14	□□□□□ -1.59
NECAP1-222	ENST00000640072	OR5C1	Q8NGR4	320 aa		5.14	□□□□□ -1.59
NECAP1-222	ENST00000640072	OR4C3	Q8NH37	302 aa		5.14	□□□□□ -1.59
NECAP1-222	ENST00000640072	OR1L1	Q8NH94	360 aa		5.14	□□□□□ -1.59
NECAP1-222	ENST00000640072	DOK4	Q8TEW6	326 aa		5.14	□□□□□ -1.59
NECAP1-222	ENST00000640072	C5orf66	Q9H5L9	145 aa		5.14	□□□□□ -1.59
NECAP1-222	ENST00000640072	JPT2	Q9H910	190 aa		5.14	□□□□□ -1.59
NECAP1-222	ENST00000640072	GNB4	Q9HAV0	340 aa		5.14	□□□□□ -1.59
NECAP1-222	ENST00000640072	TIMM8B	Q9Y5J9	83 aa	Predicted RBP	5.14	□□□□□ -1.59
NECAP1-222	ENST00000640072	ATG2B	Q96BY7	2078 aa		5.13	□□□□□ -1.59
NECAP1-222	ENST00000640072	HSPB6	O14558	160 aa		5.13	□□□□□ -1.59
NECAP1-222	ENST00000640072	NTN1	O95631	604 aa		5.13	□□□□□ -1.59
NECAP1-222	ENST00000640072	VDAC1	P21796	283 aa		5.13	□□□□□ -1.59
NECAP1-222	ENST00000640072	KIR2DS2	P43631	304 aa		5.13	□□□□□ -1.59
NECAP1-222	ENST00000640072	VDAC2	P45880	294 aa	Predicted RBP	5.13	□□□□□ -1.59
NECAP1-222	ENST00000640072	CXCL12	P48061	93 aa		5.13	□□□□□ -1.59
NECAP1-222	ENST00000640072	TAS2R46	P59540	309 aa		5.13	□□□□□ -1.59
NECAP1-222	ENST00000640072	TRIP6	Q15654	476 aa	Known RBP	5.13	□□□□□ -1.59

Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms