RNA–Protein interactions for RNA: ENST00000640058.1

CCDC7-216, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 251 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-216ENST00000640058 AP1S1P61966 158 aa1.31□□□□□ -2.2
CCDC7-216ENST00000640058 MLLT11Q13015 90 aaPredicted RBP1.31□□□□□ -2.2
CCDC7-216ENST00000640058 LGALS9BQ3B8N2 356 aa1.31□□□□□ -2.2
CCDC7-216ENST00000640058 AMTNQ6UX39 209 aa1.31□□□□□ -2.2
CCDC7-216ENST00000640058 C2orf91Q6ZV80 131 aa1.31□□□□□ -2.2
CCDC7-216ENST00000640058 DHFR2Q86XF0 187 aa1.31□□□□□ -2.2
CCDC7-216ENST00000640058 STX19Q8N4C7 294 aa1.31□□□□□ -2.2
CCDC7-216ENST00000640058 TMEM156Q8N614 296 aa1.31□□□□□ -2.2
CCDC7-216ENST00000640058 CLDND2Q8NHS1 167 aa1.31□□□□□ -2.2
CCDC7-216ENST00000640058 SKA2Q8WVK7 121 aaPredicted RBP1.31□□□□□ -2.2
CCDC7-216ENST00000640058 SFRP2Q96HF1 295 aa1.31□□□□□ -2.2
CCDC7-216ENST00000640058 ANKRD36BP1Q96IX9 119 aa1.31□□□□□ -2.2
CCDC7-216ENST00000640058 KCTD7Q96MP8 289 aa1.31□□□□□ -2.2
CCDC7-216ENST00000640058 PFDN5Q99471 154 aa1.31□□□□□ -2.2
CCDC7-216ENST00000640058 DHRS9Q9BPW9 319 aa1.31□□□□□ -2.2
CCDC7-216ENST00000640058 TXNDC17Q9BRA2 123 aa1.31□□□□□ -2.2
CCDC7-216ENST00000640058 PECRQ9BY49 303 aa1.31□□□□□ -2.2
CCDC7-216ENST00000640058 HES4Q9HCC6 221 aa1.31□□□□□ -2.2
CCDC7-216ENST00000640058 TMEM138Q9NPI0 162 aa1.31□□□□□ -2.2
CCDC7-216ENST00000640058 HDGFL3Q9Y3E1 203 aa1.31□□□□□ -2.2
CCDC7-216ENST00000640058 HSPB11Q9Y547 144 aa1.31□□□□□ -2.2
CCDC7-216ENST00000640058 CR1P17927 2039 aa1.31□□□□□ -2.2
CCDC7-216ENST00000640058 CPDO75976 1380 aa1.31□□□□□ -2.2
CCDC7-216ENST00000640058 ZFHX2Q9C0A1 2572 aaPredicted RBP1.31□□□□□ -2.2
CCDC7-216ENST00000640058 PBRM1Q86U86 1689 aa1.3□□□□□ -2.2
CCDC7-216ENST00000640058 A0A0G2JQZ4 141 aa1.3□□□□□ -2.2
CCDC7-216ENST00000640058 OR11H12B2RN74 326 aa1.3□□□□□ -2.2
CCDC7-216ENST00000640058 CNIH1O95406 144 aa1.3□□□□□ -2.2
CCDC7-216ENST00000640058 TYMSP04818 313 aa1.3□□□□□ -2.2
CCDC7-216ENST00000640058 CRHP06850 196 aa1.3□□□□□ -2.2
CCDC7-216ENST00000640058 ZNF728P0DKX0 622 aa1.3□□□□□ -2.2
CCDC7-216ENST00000640058 C8orf88P0DMB2 117 aa1.3□□□□□ -2.2
CCDC7-216ENST00000640058 SCGB1A1P11684 91 aa1.3□□□□□ -2.2
CCDC7-216ENST00000640058 MYL12AP19105 171 aa1.3□□□□□ -2.2
CCDC7-216ENST00000640058 CD24P25063 80 aa1.3□□□□□ -2.2
CCDC7-216ENST00000640058 RPS12P25398 132 aaKnown RBP1.3□□□□□ -2.2
CCDC7-216ENST00000640058 RPL5P46777 297 aaKnown RBP1.3□□□□□ -2.2
CCDC7-216ENST00000640058 SERPINB10P48595 397 aa1.3□□□□□ -2.2
CCDC7-216ENST00000640058 TCL1AP56279 114 aa1.3□□□□□ -2.2
CCDC7-216ENST00000640058 RBM11P57052 281 aaKnown RBP1.3□□□□□ -2.2
CCDC7-216ENST00000640058 TCTAP57738 103 aa1.3□□□□□ -2.2
CCDC7-216ENST00000640058 LSM6P62312 80 aaKnown RBP1.3□□□□□ -2.2
CCDC7-216ENST00000640058 HOXC5Q00444 222 aa1.3□□□□□ -2.2
CCDC7-216ENST00000640058 TPRXLQ17RH7 258 aa1.3□□□□□ -2.2
CCDC7-216ENST00000640058 LIN52Q52LA3 116 aa1.3□□□□□ -2.2
CCDC7-216ENST00000640058 CST9Q5W186 159 aa1.3□□□□□ -2.2
CCDC7-216ENST00000640058 CD200R1LQ6Q8B3 271 aa1.3□□□□□ -2.2
CCDC7-216ENST00000640058 IDO2Q6ZQW0 420 aa1.3□□□□□ -2.2
CCDC7-216ENST00000640058 CNEP1R1Q8N9A8 125 aa1.3□□□□□ -2.2
CCDC7-216ENST00000640058 TMEM161BQ8NDZ6 487 aa1.3□□□□□ -2.2
CCDC7-216ENST00000640058 OR11H2Q8NH07 326 aa1.3□□□□□ -2.2
CCDC7-216ENST00000640058 RAB8BQ92930 207 aa1.3□□□□□ -2.2
CCDC7-216ENST00000640058 IMP4Q96G21 291 aaKnown RBP1.3□□□□□ -2.2
CCDC7-216ENST00000640058 PRAP1Q96NZ9 151 aa1.3□□□□□ -2.2
CCDC7-216ENST00000640058 CMSS1Q9BQ75 279 aaKnown RBP1.3□□□□□ -2.2
CCDC7-216ENST00000640058 NMNAT1Q9HAN9 279 aaPredicted RBP1.3□□□□□ -2.2
CCDC7-216ENST00000640058 BIN3Q9NQY0 253 aa1.3□□□□□ -2.2
CCDC7-216ENST00000640058 GLTPQ9NZD2 209 aa1.3□□□□□ -2.2
CCDC7-216ENST00000640058 VPS29Q9UBQ0 182 aa1.3□□□□□ -2.2
CCDC7-216ENST00000640058 FBXO5Q9UKT4 447 aa1.3□□□□□ -2.2
CCDC7-216ENST00000640058 PCYT1BQ9Y5K3 369 aaPredicted RBP1.3□□□□□ -2.2
CCDC7-216ENST00000640058 ABCC11Q96J66 1382 aa1.3□□□□□ -2.2
CCDC7-216ENST00000640058 CUL9Q8IWT3 2517 aa1.3□□□□□ -2.2
CCDC7-216ENST00000640058 PRDM2Q13029 1718 aa1.29□□□□□ -2.2
CCDC7-216ENST00000640058 CCDC88CQ9P219 2028 aa1.29□□□□□ -2.2
CCDC7-216ENST00000640058 MDFIC2A0A1B0GVS7 189 aa1.29□□□□□ -2.2
CCDC7-216ENST00000640058 OR6C6A6NF89 314 aa1.29□□□□□ -2.2
CCDC7-216ENST00000640058 CCDC160A6NGH7 325 aa1.29□□□□□ -2.2
CCDC7-216ENST00000640058 C11orf86A6NJI1 115 aa1.29□□□□□ -2.2
CCDC7-216ENST00000640058 C21orf140B9A014 251 aa1.29□□□□□ -2.2
CCDC7-216ENST00000640058 PPP5D1E7EU14 171 aa1.29□□□□□ -2.2
CCDC7-216ENST00000640058 H3BRN7 92 aa1.29□□□□□ -2.2
CCDC7-216ENST00000640058 CXCR6O00574 342 aa1.29□□□□□ -2.2
CCDC7-216ENST00000640058 NDUFA2O43678 99 aa1.29□□□□□ -2.2
CCDC7-216ENST00000640058 SULT1C4O75897 302 aa1.29□□□□□ -2.2
CCDC7-216ENST00000640058 ATG12O94817 140 aa1.29□□□□□ -2.2
CCDC7-216ENST00000640058 IFNA1P01562 189 aa1.29□□□□□ -2.2
CCDC7-216ENST00000640058 OR10J4P0C629 311 aa1.29□□□□□ -2.2
CCDC7-216ENST00000640058 HIST1H1EP10412 219 aaKnown RBP1.29□□□□□ -2.2
CCDC7-216ENST00000640058 KCNE1P15382 129 aa1.29□□□□□ -2.2
CCDC7-216ENST00000640058 OGNP20774 298 aaKnown RBP1.29□□□□□ -2.2
CCDC7-216ENST00000640058 S100PP25815 95 aa1.29□□□□□ -2.2
CCDC7-216ENST00000640058 XCL1P47992 114 aa1.29□□□□□ -2.2
CCDC7-216ENST00000640058 ZNF140P52738 457 aaPredicted RBP1.29□□□□□ -2.2
CCDC7-216ENST00000640058 HLA-DRB3P79483 266 aa1.29□□□□□ -2.2
CCDC7-216ENST00000640058 EDDM3AQ14507 147 aa1.29□□□□□ -2.2
CCDC7-216ENST00000640058 JOSD1Q15040 202 aaPredicted RBP1.29□□□□□ -2.2
CCDC7-216ENST00000640058 HIST3H3Q16695 136 aa1.29□□□□□ -2.2
CCDC7-216ENST00000640058 HIST2H3PS2Q5TEC6 136 aa1.29□□□□□ -2.2
CCDC7-216ENST00000640058 SYPL2Q5VXT5 272 aa1.29□□□□□ -2.2
CCDC7-216ENST00000640058 RPL13AP3Q6NVV1 102 aa1.29□□□□□ -2.2
CCDC7-216ENST00000640058 TNFAIP8L2Q6P589 184 aaPredicted RBP1.29□□□□□ -2.2
CCDC7-216ENST00000640058 DHRS4L2Q6PKH6 230 aa1.29□□□□□ -2.2
CCDC7-216ENST00000640058 RASSF6Q6ZTQ3 369 aa1.29□□□□□ -2.2
CCDC7-216ENST00000640058 SLC36A1Q7Z2H8 476 aa1.29□□□□□ -2.2
CCDC7-216ENST00000640058 SPATA12Q7Z6I5 190 aa1.29□□□□□ -2.2
CCDC7-216ENST00000640058 S100A7AQ86SG5 101 aa1.29□□□□□ -2.2
CCDC7-216ENST00000640058 LYG2Q86SG7 212 aa1.29□□□□□ -2.2
CCDC7-216ENST00000640058 PHF13Q86YI8 300 aaPredicted RBP1.29□□□□□ -2.2
CCDC7-216ENST00000640058 OR6V1Q8N148 313 aa1.29□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms