RNA–Protein interactions for RNA: ENST00000639809.1

SPIN3-229, Transcript of spindlin family member 3, human

TSL 5

Gene SPIN3, Length 1,118 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIN3-229	ENST00000639809	ZNF735	P0CB33	412 aa		11.86	□□□□□ -0.51
SPIN3-229	ENST00000639809	ARL3	P36405	182 aa		11.86	□□□□□ -0.51
SPIN3-229	ENST00000639809	RPL27A	P46776	148 aa	Known RBP	11.86	□□□□□ -0.51
SPIN3-229	ENST00000639809	C10orf55	Q5SWW7	151 aa		11.86	□□□□□ -0.51
SPIN3-229	ENST00000639809	MZT2A	Q6P582	158 aa		11.86	□□□□□ -0.51
SPIN3-229	ENST00000639809	MARC2	Q969Z3	335 aa		11.86	□□□□□ -0.51
SPIN3-229	ENST00000639809	EEF1AKMT3	Q96AZ1	226 aa		11.86	□□□□□ -0.51
SPIN3-229	ENST00000639809	WDR89	Q96FK6	387 aa	Predicted RBP	11.86	□□□□□ -0.51
SPIN3-229	ENST00000639809	FYTTD1	Q96QD9	318 aa	Known RBP	11.86	□□□□□ -0.51
SPIN3-229	ENST00000639809	ALMS1	Q8TCU4	4167 aa		11.85	□□□□□ -0.51
SPIN3-229	ENST00000639809	LOC102724200	A0A096LPH7	203 aa	Predicted RBP	11.85	□□□□□ -0.51
SPIN3-229	ENST00000639809	TRBV7-1	A0A0A6YYK4	115 aa		11.85	□□□□□ -0.51
SPIN3-229	ENST00000639809	SCGN	O76038	276 aa		11.85	□□□□□ -0.51
SPIN3-229	ENST00000639809	PUSL1	Q8N0Z8	303 aa	Known RBP	11.85	□□□□□ -0.51
SPIN3-229	ENST00000639809	OR52B4	Q8NGK2	314 aa		11.85	□□□□□ -0.51
SPIN3-229	ENST00000639809	SLC25A38	Q96DW6	304 aa		11.85	□□□□□ -0.51
SPIN3-229	ENST00000639809	CXorf58	Q96LI9	332 aa		11.85	□□□□□ -0.51
SPIN3-229	ENST00000639809	FANCD2OS	Q96PS1	177 aa		11.85	□□□□□ -0.51
SPIN3-229	ENST00000639809	C6orf62	Q9GZU0	229 aa	Predicted RBP	11.85	□□□□□ -0.51
SPIN3-229	ENST00000639809	WFDC10A	Q9H1F0	79 aa		11.85	□□□□□ -0.51
SPIN3-229	ENST00000639809	COMMD3	Q9UBI1	195 aa		11.85	□□□□□ -0.51
SPIN3-229	ENST00000639809	TMEM213	A2RRL7	107 aa		11.84	□□□□□ -0.51
SPIN3-229	ENST00000639809	HMX3	A6NHT5	357 aa		11.84	□□□□□ -0.51
SPIN3-229	ENST00000639809	HPGDS	O60760	199 aa		11.84	□□□□□ -0.51
SPIN3-229	ENST00000639809	NDUFB8	O95169	186 aa		11.84	□□□□□ -0.51
SPIN3-229	ENST00000639809	HRAS	P01112	189 aa		11.84	□□□□□ -0.51
SPIN3-229	ENST00000639809	IL6R	P08887	468 aa	Predicted RBP	11.84	□□□□□ -0.51
SPIN3-229	ENST00000639809	PSMB6	P28072	239 aa		11.84	□□□□□ -0.51
SPIN3-229	ENST00000639809	MSMO1	Q15800	293 aa		11.84	□□□□□ -0.51
SPIN3-229	ENST00000639809	UBE2NL	Q5JXB2	153 aa		11.84	□□□□□ -0.51
SPIN3-229	ENST00000639809	HACD4	Q5VWC8	232 aa		11.84	□□□□□ -0.51
SPIN3-229	ENST00000639809	CNIH2	Q6PI25	160 aa		11.84	□□□□□ -0.51
SPIN3-229	ENST00000639809	ZNF66	Q6ZN08	573 aa		11.84	□□□□□ -0.51
SPIN3-229	ENST00000639809	TMEM61	Q8N0U2	210 aa		11.84	□□□□□ -0.51
SPIN3-229	ENST00000639809	SAMD12	Q8N8I0	201 aa		11.84	□□□□□ -0.51
SPIN3-229	ENST00000639809	OR4A5	Q8NH83	315 aa		11.84	□□□□□ -0.51
SPIN3-229	ENST00000639809	LINC00476	Q8WZB0	136 aa		11.84	□□□□□ -0.51
SPIN3-229	ENST00000639809	CCDC140	Q96MF4	163 aa		11.84	□□□□□ -0.51
SPIN3-229	ENST00000639809	ATG5	Q9H1Y0	275 aa		11.84	□□□□□ -0.51
SPIN3-229	ENST00000639809	MIXL1	Q9H2W2	232 aa		11.84	□□□□□ -0.51
SPIN3-229	ENST00000639809	RHBDL2	Q9NX52	303 aa		11.84	□□□□□ -0.51
SPIN3-229	ENST00000639809	TP53TG1	Q9Y2A0	90 aa		11.84	□□□□□ -0.51
SPIN3-229	ENST00000639809	PLEC	Q15149	4684 aa	Known RBP	11.84	□□□□□ -0.51
SPIN3-229	ENST00000639809	IGKV1D-8	A0A087WSZ0	117 aa		11.83	□□□□□ -0.52
SPIN3-229	ENST00000639809	ZNF320	A2RRD8	509 aa		11.83	□□□□□ -0.52
SPIN3-229	ENST00000639809	NUPR2	A6NF83	97 aa		11.83	□□□□□ -0.52
SPIN3-229	ENST00000639809	CTDSP2	O14595	271 aa		11.83	□□□□□ -0.52
SPIN3-229	ENST00000639809	IGLV2-14	P01704	120 aa		11.83	□□□□□ -0.52
SPIN3-229	ENST00000639809	HLA-A	P01891	365 aa	Known RBP	11.83	□□□□□ -0.52
SPIN3-229	ENST00000639809	CTRB1	P17538	263 aa		11.83	□□□□□ -0.52
SPIN3-229	ENST00000639809	ATF4	P18848	351 aa	Predicted RBP	11.83	□□□□□ -0.52
SPIN3-229	ENST00000639809	ELL	P55199	621 aa	Predicted RBP	11.83	□□□□□ -0.52
SPIN3-229	ENST00000639809	RPL30	P62888	115 aa	Known RBP	11.83	□□□□□ -0.52
SPIN3-229	ENST00000639809	CDNF	Q49AH0	187 aa		11.83	□□□□□ -0.52
SPIN3-229	ENST00000639809	CTRB2	Q6GPI1	263 aa		11.83	□□□□□ -0.52
SPIN3-229	ENST00000639809	CLEC19A	Q6UXS0	136 aa		11.83	□□□□□ -0.52
SPIN3-229	ENST00000639809	WFDC3	Q8IUB2	231 aa		11.83	□□□□□ -0.52
SPIN3-229	ENST00000639809	UXS1	Q8NBZ7	420 aa		11.83	□□□□□ -0.52
SPIN3-229	ENST00000639809	TCTEX1D2	Q8WW35	142 aa		11.83	□□□□□ -0.52
SPIN3-229	ENST00000639809	OVOL2	Q9BRP0	275 aa		11.83	□□□□□ -0.52
SPIN3-229	ENST00000639809	ST6GALNAC5	Q9BVH7	336 aa		11.83	□□□□□ -0.52
SPIN3-229	ENST00000639809	RGS5	O15539	181 aa		11.82	□□□□□ -0.52
SPIN3-229	ENST00000639809	APOA1	P02647	267 aa		11.82	□□□□□ -0.52
SPIN3-229	ENST00000639809	EIF4E	P06730	217 aa	Known RBP	11.82	□□□□□ -0.52
SPIN3-229	ENST00000639809	FGF2	P09038	288 aa		11.82	□□□□□ -0.52
SPIN3-229	ENST00000639809	C8orf88	P0DMB2	117 aa		11.82	□□□□□ -0.52
SPIN3-229	ENST00000639809	DEFA4	P12838	97 aa		11.82	□□□□□ -0.52
SPIN3-229	ENST00000639809	NFYA	P23511	347 aa	Predicted RBP	11.82	□□□□□ -0.52
SPIN3-229	ENST00000639809	RPL8	P62917	257 aa	Known RBP	11.82	□□□□□ -0.52
SPIN3-229	ENST00000639809	EIF4EBP1	Q13541	118 aa	Predicted RBP	11.82	□□□□□ -0.52
SPIN3-229	ENST00000639809	OR2B11	Q5JQS5	317 aa		11.82	□□□□□ -0.52
SPIN3-229	ENST00000639809	VKORC1L1	Q8N0U8	176 aa		11.82	□□□□□ -0.52
SPIN3-229	ENST00000639809	MFSD4A	Q8N468	514 aa		11.82	□□□□□ -0.52
SPIN3-229	ENST00000639809	CMTM3	Q96MX0	182 aa		11.82	□□□□□ -0.52
SPIN3-229	ENST00000639809	SRSF8	Q9BRL6	282 aa	Known RBP	11.82	□□□□□ -0.52
SPIN3-229	ENST00000639809	BET1L	Q9NYM9	111 aa		11.82	□□□□□ -0.52
SPIN3-229	ENST00000639809	THYN1	Q9P016	225 aa		11.82	□□□□□ -0.52
SPIN3-229	ENST00000639809	MRPL27	Q9P0M9	148 aa	Known RBP	11.82	□□□□□ -0.52
SPIN3-229	ENST00000639809	MLX	Q9UH92	298 aa		11.82	□□□□□ -0.52
SPIN3-229	ENST00000639809	UBE2C	O00762	179 aa		11.81	□□□□□ -0.52
SPIN3-229	ENST00000639809	CYB5B	O43169	146 aa		11.81	□□□□□ -0.52
SPIN3-229	ENST00000639809	MYOD1	P15172	320 aa		11.81	□□□□□ -0.52
SPIN3-229	ENST00000639809	ELK1	P19419	428 aa		11.81	□□□□□ -0.52
SPIN3-229	ENST00000639809	APOC4	P55056	127 aa		11.81	□□□□□ -0.52
SPIN3-229	ENST00000639809	RBPMS2	Q6ZRY4	209 aa	Known RBP	11.81	□□□□□ -0.52
SPIN3-229	ENST00000639809		Q6ZWC4	215 aa		11.81	□□□□□ -0.52
SPIN3-229	ENST00000639809	SLC38A6	Q8IZM9	456 aa		11.81	□□□□□ -0.52
SPIN3-229	ENST00000639809	CACNG8	Q8WXS5	425 aa		11.81	□□□□□ -0.52
SPIN3-229	ENST00000639809	UFC1	Q9Y3C8	167 aa		11.81	□□□□□ -0.52
SPIN3-229	ENST00000639809	IGLV11-55	A0A075B6I3	123 aa		11.8	□□□□□ -0.52
SPIN3-229	ENST00000639809	IGKV1D-13	A0A0B4J2D9	117 aa		11.8	□□□□□ -0.52
SPIN3-229	ENST00000639809	FAM25A	B3EWG3	89 aa		11.8	□□□□□ -0.52
SPIN3-229	ENST00000639809	FAM25C	B3EWG5	89 aa		11.8	□□□□□ -0.52
SPIN3-229	ENST00000639809	FAM25G	B3EWG6	89 aa		11.8	□□□□□ -0.52
SPIN3-229	ENST00000639809		E7EUB6	86 aa		11.8	□□□□□ -0.52
SPIN3-229	ENST00000639809		J3QRK9	145 aa		11.8	□□□□□ -0.52
SPIN3-229	ENST00000639809	RBFOX2	O43251	390 aa	Known RBP eCLIP	11.8	□□□□□ -0.52
SPIN3-229	ENST00000639809	CLEC3B	P05452	202 aa		11.8	□□□□□ -0.52
SPIN3-229	ENST00000639809	IGKV1-13	P0DP09	117 aa		11.8	□□□□□ -0.52
SPIN3-229	ENST00000639809	AREG	P15514	252 aa		11.8	□□□□□ -0.52

Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms