RNA–Protein interactions for RNA: ENST00000639561.1

ATRIP-208, Transcript of ATR interacting protein, humanhuman

TSL 2

Gene ATRIP, Length 2,376 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRIP-208ENST00000639561 OR13C7P0DN81 318 aa11.3□□□□□ -0.6
ATRIP-208ENST00000639561 MEF2CQ06413 473 aaPredicted RBP11.3□□□□□ -0.6
ATRIP-208ENST00000639561 TMEM30BQ3MIR4 351 aa11.3□□□□□ -0.6
ATRIP-208ENST00000639561 PDLIM3Q53GG5 364 aaPredicted RBP11.3□□□□□ -0.6
ATRIP-208ENST00000639561 CLDND2Q8NHS1 167 aa11.3□□□□□ -0.6
ATRIP-208ENST00000639561 PINX1Q96BK5 328 aaKnown RBP11.3□□□□□ -0.6
ATRIP-208ENST00000639561 RHOVQ96L33 236 aa11.3□□□□□ -0.6
ATRIP-208ENST00000639561 GAL3ST2Q9H3Q3 398 aa11.3□□□□□ -0.6
ATRIP-208ENST00000639561 TRAV1-1A0A0B4J248 108 aa11.29□□□□□ -0.6
ATRIP-208ENST00000639561 IGKV1D-33P01593 117 aa11.29□□□□□ -0.6
ATRIP-208ENST00000639561 IGKV1-33P01594 117 aa11.29□□□□□ -0.6
ATRIP-208ENST00000639561 SOD3P08294 240 aa11.29□□□□□ -0.6
ATRIP-208ENST00000639561 SPCS3P61009 180 aa11.29□□□□□ -0.6
ATRIP-208ENST00000639561 VWC2Q2TAL6 325 aa11.29□□□□□ -0.6
ATRIP-208ENST00000639561 DTX2Q86UW9 622 aa11.29□□□□□ -0.6
ATRIP-208ENST00000639561 ZNF714Q96N38 554 aa11.29□□□□□ -0.6
ATRIP-208ENST00000639561 MAP1AP78559 2803 aaPredicted RBP11.29□□□□□ -0.6
ATRIP-208ENST00000639561 B9A039 149 aa11.28□□□□□ -0.6
ATRIP-208ENST00000639561 EIF3GO75821 320 aaKnown RBP eCLIP11.28□□□□□ -0.6
ATRIP-208ENST00000639561 IGKV1-16P04430 117 aa11.28□□□□□ -0.6
ATRIP-208ENST00000639561 CT45A6P0DMU7 189 aa11.28□□□□□ -0.6
ATRIP-208ENST00000639561 CT45A5P0DMU8 189 aa11.28□□□□□ -0.6
ATRIP-208ENST00000639561 CT45A7P0DMV0 189 aa11.28□□□□□ -0.6
ATRIP-208ENST00000639561 AKR1C3P42330 323 aa11.28□□□□□ -0.6
ATRIP-208ENST00000639561 VDAC2P45880 294 aaPredicted RBP11.28□□□□□ -0.6
ATRIP-208ENST00000639561 GNB2P62879 340 aa11.28□□□□□ -0.6
ATRIP-208ENST00000639561 ICAM4Q14773 271 aa11.28□□□□□ -0.6
ATRIP-208ENST00000639561 ATP6V1FQ16864 119 aa11.28□□□□□ -0.6
ATRIP-208ENST00000639561 OR4A47Q6IF82 309 aa11.28□□□□□ -0.6
ATRIP-208ENST00000639561 LCN15Q6UWW0 184 aa11.28□□□□□ -0.6
ATRIP-208ENST00000639561 HEPN1Q6WQI6 88 aa11.28□□□□□ -0.6
ATRIP-208ENST00000639561 CENPVQ7Z7K6 275 aaPredicted RBP11.28□□□□□ -0.6
ATRIP-208ENST00000639561 OR52E5Q8NH55 327 aa11.28□□□□□ -0.6
ATRIP-208ENST00000639561 SETD2Q9BYW2 2564 aaPredicted RBP11.28□□□□□ -0.6
ATRIP-208ENST00000639561 ZNF469Q96JG9 3925 aaPredicted RBP11.28□□□□□ -0.6
ATRIP-208ENST00000639561 IGHV1-69-2A0A0G2JMI3 117 aa11.28□□□□□ -0.6
ATRIP-208ENST00000639561 DVL1O14640 695 aa11.28□□□□□ -0.6
ATRIP-208ENST00000639561 HBE1P02100 147 aa11.28□□□□□ -0.6
ATRIP-208ENST00000639561 FBP1P09467 338 aa11.28□□□□□ -0.6
ATRIP-208ENST00000639561 S100A12P80511 92 aa11.28□□□□□ -0.6
ATRIP-208ENST00000639561 FLI1Q01543 452 aaPredicted RBP11.28□□□□□ -0.6
ATRIP-208ENST00000639561 AKIRIN2Q53H80 203 aa11.28□□□□□ -0.6
ATRIP-208ENST00000639561 AWAT1Q58HT5 328 aa11.28□□□□□ -0.6
ATRIP-208ENST00000639561 TMEM41BQ5BJD5 291 aa11.28□□□□□ -0.6
ATRIP-208ENST00000639561 ACSM6Q6P461 480 aa11.28□□□□□ -0.6
ATRIP-208ENST00000639561 ZNF429Q86V71 674 aa11.28□□□□□ -0.6
ATRIP-208ENST00000639561 TMEM170AQ8WVE7 144 aa11.28□□□□□ -0.6
ATRIP-208ENST00000639561 H1FXQ92522 213 aaKnown RBP11.28□□□□□ -0.6
ATRIP-208ENST00000639561 ADTRPQ96IZ2 230 aa11.28□□□□□ -0.6
ATRIP-208ENST00000639561 C12orf57Q99622 126 aa11.28□□□□□ -0.6
ATRIP-208ENST00000639561 SMR3AQ99954 134 aa11.28□□□□□ -0.6
ATRIP-208ENST00000639561 SMDT1Q9H4I9 107 aa11.28□□□□□ -0.6
ATRIP-208ENST00000639561 C15orf61A6NNL5 157 aa11.27□□□□□ -0.6
ATRIP-208ENST00000639561 NDUFB3O43676 98 aa11.27□□□□□ -0.6
ATRIP-208ENST00000639561 SCAF4O95104 1147 aaKnown RBP11.27□□□□□ -0.6
ATRIP-208ENST00000639561 HOXB4P17483 251 aaPredicted RBP11.27□□□□□ -0.6
ATRIP-208ENST00000639561 MDKP21741 143 aaPredicted RBP11.27□□□□□ -0.6
ATRIP-208ENST00000639561 FGF7P21781 194 aa11.27□□□□□ -0.6
ATRIP-208ENST00000639561 FGF8P55075 233 aaPredicted RBP11.27□□□□□ -0.6
ATRIP-208ENST00000639561 RAB2AP61019 212 aa11.27□□□□□ -0.6
ATRIP-208ENST00000639561 HFEQ30201 348 aa11.27□□□□□ -0.6
ATRIP-208ENST00000639561 ZNF506Q5JVG8 444 aa11.27□□□□□ -0.6
ATRIP-208ENST00000639561 RPP25LQ8N5L8 163 aaKnown RBP11.27□□□□□ -0.6
ATRIP-208ENST00000639561 OR10A7Q8NGE5 316 aa11.27□□□□□ -0.6
ATRIP-208ENST00000639561 MBD3L1Q8WWY6 194 aa11.27□□□□□ -0.6
ATRIP-208ENST00000639561 C20orf24Q9BUV8 137 aa11.27□□□□□ -0.6
ATRIP-208ENST00000639561 TCF19Q9Y242 345 aa11.27□□□□□ -0.6
ATRIP-208ENST00000639561 TIMM9Q9Y5J7 89 aa11.27□□□□□ -0.6
ATRIP-208ENST00000639561 RRHO14718 337 aa11.27□□□□□ -0.61
ATRIP-208ENST00000639561 SMAD7O15105 426 aaKnown RBP11.27□□□□□ -0.61
ATRIP-208ENST00000639561 DAOP14920 347 aa11.27□□□□□ -0.61
ATRIP-208ENST00000639561 LRRC10Q5BKY1 277 aa11.27□□□□□ -0.61
ATRIP-208ENST00000639561 NPCDR1Q9BY65 106 aa11.27□□□□□ -0.61
ATRIP-208ENST00000639561 TMEM14BQ9NUH8 114 aa11.27□□□□□ -0.61
ATRIP-208ENST00000639561 KAAG1Q9UBP8 84 aa11.27□□□□□ -0.61
ATRIP-208ENST00000639561 LYNX1G3V0Z9 82 aa11.26□□□□□ -0.61
ATRIP-208ENST00000639561 SRP19P09132 144 aaKnown RBP11.26□□□□□ -0.61
ATRIP-208ENST00000639561 LYNX1P0DP58 116 aa11.26□□□□□ -0.61
ATRIP-208ENST00000639561 MYOD1P15172 320 aa11.26□□□□□ -0.61
ATRIP-208ENST00000639561 CDKN1AP38936 164 aa11.26□□□□□ -0.61
ATRIP-208ENST00000639561 HOXA1P49639 335 aaPredicted RBP11.26□□□□□ -0.61
ATRIP-208ENST00000639561 CLEC12BQ2HXU8 276 aa11.26□□□□□ -0.61
ATRIP-208ENST00000639561 ZNF833PQ6ZTB9 187 aa11.26□□□□□ -0.61
ATRIP-208ENST00000639561 CIARTQ8N365 385 aaPredicted RBP11.26□□□□□ -0.61
ATRIP-208ENST00000639561 MUC15Q8N387 334 aa11.26□□□□□ -0.61
ATRIP-208ENST00000639561 Q8N7P7 452 aa11.26□□□□□ -0.61
ATRIP-208ENST00000639561 RXFP4Q8TDU9 374 aa11.26□□□□□ -0.61
ATRIP-208ENST00000639561 GNG13Q9P2W3 67 aa11.26□□□□□ -0.61
ATRIP-208ENST00000639561 MALRD1Q5VYJ5 2156 aa11.26□□□□□ -0.61
ATRIP-208ENST00000639561 SRRM4A7MD48 611 aaKnown RBP11.26□□□□□ -0.61
ATRIP-208ENST00000639561 LY6G6DO95868 133 aa11.26□□□□□ -0.61
ATRIP-208ENST00000639561 IFNA10P01566 189 aa11.26□□□□□ -0.61
ATRIP-208ENST00000639561 RPL35P42766 123 aaKnown RBP11.26□□□□□ -0.61
ATRIP-208ENST00000639561 POU2AF1Q16633 256 aa11.26□□□□□ -0.61
ATRIP-208ENST00000639561 SOHLH1Q5JUK2 328 aa11.26□□□□□ -0.61
ATRIP-208ENST00000639561 ABHD12Q8N2K0 398 aa11.26□□□□□ -0.61
ATRIP-208ENST00000639561 CYB561D1Q8N8Q1 229 aa11.26□□□□□ -0.61
ATRIP-208ENST00000639561 HEYLQ9NQ87 328 aaPredicted RBP11.26□□□□□ -0.61
ATRIP-208ENST00000639561 CBLN4Q9NTU7 201 aa11.26□□□□□ -0.61
ATRIP-208ENST00000639561 FOXA2Q9Y261 457 aaPredicted RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms